Dbfetch
LOCUS NM_140249 2532 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster uncharacterized protein, transcript variant A (CG14131), mRNA. ACCESSION NM_140249 VERSION NM_140249.2 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2532) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2532) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2532) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2532) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2532) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2532) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2532) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2532) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2532) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2532) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2532) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2532) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2532) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2532) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2532) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (10-NOV-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2532) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2532) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2532) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2532) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2532) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 21 (bases 1 to 2532) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-OCT-2015) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 22 (bases 1 to 2532) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 23 (bases 1 to 2532) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 24 (bases 1 to 2532) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 25 (bases 1 to 2532) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_037436). On Dec 17, 2009 this sequence version replaced NM_140249.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2532 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="3L" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..2532 /gene="CG14131" /locus_tag="Dmel_CG14131" /gene_synonym="Dmel\CG14131; Pi3K68D" /map="68D4-68D4" /db_xref="FLYBASE:FBgn0036205" /db_xref="GeneID:39328" CDS 150..2357 /gene="CG14131" /locus_tag="Dmel_CG14131" /gene_synonym="Dmel\CG14131; Pi3K68D" /note="CG14131 gene product from transcript CG14131-RA; CG14131-PA" /codon_start=1 /product="uncharacterized protein, isoform A" /protein_id="NP_648506.1" /db_xref="FLYBASE:FBpp0075760" /db_xref="GeneID:39328" /db_xref="FLYBASE:FBgn0036205" /translation="MAQLKNVGQAGQQAVLVVGPMLASAMLLMGLIFALLGIKFFGFR RRLTFERSQVQRQQQNQQQQQPPPRYAAFESQVNGTDTAVHGVFRRRNLEEFESPWPS ASATTGNNFISGSVPNLQLYGASPRQPKSTEESPVSYREKSEAQRLEVHSEHYEFYTA PPTRKPPSPPLQSEVLAETASVVSLPKILESIPAPPPRTMRGAAASKPSGPAASVDTA PEPPSELGMPNFDHFAEKYELFSVKPTTAPTRPTQLRSKNSGRYVKFEPVDDVPEILT PEDPVPELLTPDDGLGGAMSVTAVVHRGAIPKEETESKDEPQAPNDTDPFGGPSNTDS AFVVEIIAGSPEAEATPSIQPTFQNGLFENLELPQGEHDSDFVRIRSSFVMNEADILD LDQLQLPAASSPPGFGKSIDEDWENFANLDAVVDVPEPNWSLHPNSLEQVPTVEATLN EAAVRLDDVEQVEGLFHQLELIEPRMDIFEPEPPAPIINPPPYDPGLPYLPDYESLMR LDIAKNGQKLPDYTEVMQQRSKTSNYVMSIEDLYADLDVNEVEINGSQVNQSNEIPNF EALCQEMAVVVPSERQAPQPAPRSTKSARSLNVRGSTSPLACYQPEELPSSSSSDTDG EEGARSAPEPAKRDPKSLKVRFDVDNLQYYQSAEVVTSGDESEEDEPMQQPTPTQRSI IFEPSNTGVPSLFGSQVSQEDSDDDNGFGRAISQHRSMTATLRTNAVRNNTDD" ORIGIN 1 cgagctggtt agcggagccg agagcggtcc gattagcgac gtggtgaagt ttcattacac 61 ttttggccac aaaacaaagg gcgactgtgc caaccagcga ctttatccag aatgccgagc 121 caacagattt gctggtgaga caaaaagaca tggcccagct gaagaatgtg ggccaagcag 181 gtcaacaggc cgttcttgtt gttggcccca tgcttgcctc ggccatgttg ctcatggggc 241 tgatattcgc gctgctgggg atcaagttct tcggcttccg gcggcgactg actttcgagc 301 gatcgcaggt gcagcggcaa cagcagaatc agcagcagca acaaccgccg ccacgttacg 361 cagctttcga atcgcaggtt aacggcaccg atactgctgt ccatggagtg ttccgacgtc 421 gcaatctcga ggaattcgaa agcccatggc catcggcatc agcaacgaca gggaacaact 481 tcatcagtgg cagtgttcca aatctgcaac tatatggcgc cagcccaaga cagcccaaat 541 ccacggaaga atcaccagtt tcctatcgag agaagtcgga ggcacaacga ctggaggtgc 601 acagtgagca ctatgaattc tacaccgctc cacctacccg caagccacct tctccgccac 661 tacaatcaga agtactagct gaaactgcct cggtagtttc actacctaag atactagaat 721 ccatccctgc tccacctccc aggaccatga gaggagctgc tgcatccaag ccttcaggac 781 ctgcagcttc tgtcgacaca gctcccgagc ctcctagcga actgggaatg cccaacttcg 841 atcactttgc tgaaaagtac gagttgttta gtgtaaaacc aacgactgcg cccactagac 901 caacacagtt gcgaagcaag aacagcggcc gctatgtgaa gttcgagcca gttgatgatg 961 tgccggaaat tctcactcct gaggatcccg ttccggagtt actaactcca gatgatggtt 1021 tgggaggagc gatgtcagtt accgctgtgg ttcatagggg agccataccc aaggaagaaa 1081 cggaatcgaa agatgaaccg caagcaccaa atgataccga tccctttggg ggacccagca 1141 atacagactc agcttttgtc gtggaaatca tagcaggaag tcccgaagcg gaagcgactc 1201 ctagtataca gcccaccttt caaaatggcc tatttgaaaa ccttgaatta ccacaaggtg 1261 agcacgacag tgatttcgtg cgaatacgtt cgtcattcgt gatgaacgaa gccgacatcc 1321 tggatttgga tcagctgcag ctgccggcgg ccagtagtcc accaggattt ggcaagagca 1381 tcgacgagga ctgggagaac tttgccaacc tagacgccgt ggtggatgtg ccagagccca 1441 attggtctct gcatccgaat agcttagagc aagtgcccac tgtggaggcg acgcttaatg 1501 aggctgccgt cagactggac gatgtggaac aggtggaggg tctgttccat caactagagc 1561 ttatagagcc gagaatggat atattcgagc ctgagccgcc agctcccatt ataaatccac 1621 cgccatacga tcctggtctg ccctatctac cagattacga atccctgatg cggctagata 1681 ttgcaaagaa cggtcagaaa ttgcccgact acaccgaggt aatgcaacaa aggtccaaga 1741 catccaatta tgtaatgagc attgaggatc tatacgcgga tctggatgtt aatgaggtgg 1801 agataaacgg ttctcaagtc aaccagagca atgaaatccc caatttcgag gccttgtgcc 1861 aggaaatggc tgtggtggtg ccatcagagc gtcaagctcc tcagcccgcg cccaggtcta 1921 ccaaatcagc cagatccctc aatgttcgtg gtagtacttc tccccttgcg tgctatcaac 1981 ctgaagagct tcccagctcc agttccagtg ataccgatgg ggaggaggga gcacgatcag 2041 ctccagaacc tgccaaacgt gatccgaaat cgctcaaagt ccgctttgat gtggataatc 2101 tgcagtacta ccagtccgct gaggtggtaa catcaggtga tgagtctgaa gaggatgagc 2161 cgatgcaaca gccaactccc acgcagcgtt cgatcatttt tgaaccgagt aatactggag 2221 tgcccagcct attcggatcc caggtctccc aggaagacag tgatgacgat aatggctttg 2281 gacgagctat cagccaacat cgctccatga ctgcgacact taggacaaac gctgttagaa 2341 acaataccga tgactagtcc gaaaacagga aactgccgca agtcttgact tccttagtaa 2401 atacagtatt ctatgtgtta aatttagcca aatgactatg acctatttat gtacatacat 2461 atcactgaaa aattgccata tcatgttgac tacataaaat aataaagtaa tggcaggaaa 2521 tccatttatg at //