Dbfetch
LOCUS NM_137013 2355 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster uncharacterized protein (CG4714), mRNA. ACCESSION NM_137013 VERSION NM_137013.3 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2355) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2355) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2355) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2355) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2355) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2355) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2355) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2355) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2355) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2355) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2355) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2355) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2355) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2355) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2355) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2355) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2355) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2355) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2355) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2355) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-OCT-2015) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 21 (bases 1 to 2355) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 2355) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 23 (bases 1 to 2355) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 24 (bases 1 to 2355) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033778). On Jul 15, 2014 this sequence version replaced NM_137013.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2355 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="2R" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..2355 /gene="CG4714" /locus_tag="Dmel_CG4714" /gene_synonym="anon-WO0140519.159; Dmel\CG4714" /map="49F13-49F13" /db_xref="FLYBASE:FBgn0033819" /db_xref="GeneID:36470" CDS 113..2311 /gene="CG4714" /locus_tag="Dmel_CG4714" /gene_synonym="anon-WO0140519.159; Dmel\CG4714" /note="CG4714 gene product from transcript CG4714-RA; CG4714-PA" /codon_start=1 /product="uncharacterized protein" /protein_id="NP_610857.2" /db_xref="FLYBASE:FBpp0086869" /db_xref="GeneID:36470" /db_xref="FLYBASE:FBgn0033819" /translation="MSQNHASTEEVLHVVEAIEAGEKSEVDTVPVVVPPESTAEPEVI SKPEEGNQPAGDEPREEKPQIESGAITAQVATEEGQEAETTEHVAIEATELGNEVQQT EASDELSPEEKKLKLKKERKERLKNFATTRFAPTAIESPVHFTPEYMEEIRDNEVEEE EQEQVVTFDEPTIGDGESVSSSVLTDDSEDYPFHPPKLVSLFPTYGFSDGPADRNIFQ SDVKYEDIDYSVSLTGISIVSTRTLKTECDPDSVQLKTNFLRDFDVPSLSDISEEHDE SSQSLDAGSVISVQQDHGFFADPTSNMDSGSSSSSESIGDVDKEQQAEEAAPESEVDS FDVSDIPEFDEIPVVKRVEQNQDSIDAFSTLSKVAFAVPEVRDDPVISHALEIKAVVR ELLYDLFEETASLSDIHNKDNKIRAKLDKNKLLTELDKVITTYLYEKYTNEMVGNRLV EYYKRNRNARVFATLSPENEKRFHSRYMHALALLDSLKYRLDVAKHKHAIQMNRVILD LHSAQSVASITEERLEHLFREHLVRPESDNLRRLVDRELRMMTAKRNEISDSRLFLIT RKHTLGRIMGKIKELDTLSETLSIEDFLSVQNNVFALQKKIEERNTDLKRMRTQFLMD VHLTRHNREKALALAENFELSKIRLKNAMKNQTDLRRRLYEVKLERKKMRQQSRDMTF HGGILAMPSLMYDYDNTVERLKEKRETVAKLRETLKSLQRRLSYVEGRSI" ORIGIN 1 cacaggtaac acaaaataaa cacacacaaa aaaatataaa ataataaaaa catttaaaaa 61 caacaaaaac accaaaaaaa aaacaaaaca cacacacaca ttaacaccaa aaatgtccca 121 gaatcatgcc tctacggaag aagtcttgca cgtggtggag gccatcgagg caggtgaaaa 181 atccgaggta gacactgttc cagtggttgt gccaccagaa tcaacagctg agcccgaagt 241 gatctccaag ccagaggagg gcaaccaacc agctggcgat gagccgcggg aggagaagcc 301 acagatcgaa tctggcgcaa ttaccgccca ggtggcgacg gaggagggac aggaagcgga 361 aaccaccgaa cacgtagcta tcgaagcaac tgagcttggt aatgaagtgc agcaaacgga 421 agcatcagat gaactatcgc cagaagaaaa gaaactgaag ctgaagaagg agcgaaagga 481 gcgtttgaag aatttcgcaa ccactcgctt tgcaccgaca gcaatcgaga gcccagttca 541 ttttacaccg gaatatatgg aagagatcag ggataatgag gtagaggaag aagagcagga 601 acaggtagtc acctttgatg agcccaccat tggagacggg gagtctgtgt cctcgtcagt 661 tctcaccgac gactcagaag actatccatt ccatccaccc aaattggtca gcctattccc 721 cacctatggc ttctcagatg gccccgctga tagaaacata ttccaatcgg atgtgaagta 781 tgaggacatt gattattcgg ttagtttgac tggcataagc attgtatcga caagaacgtt 841 aaaaaccgaa tgcgatccgg attcagtcca gttaaaaacc aactttctga gggactttga 901 tgtgcccagt ctgtcggaca tatcggagga gcacgacgag tcttcacagt cattggacgc 961 tgggtcggtg ataagcgtcc agcaagatca tggcttcttt gcggatccaa cgtcgaacat 1021 ggactccggt tccagctcgt cgtcggaatc gattggagac gtggacaaag agcaacaggc 1081 tgaggaggcg gctccagaaa gtgaggtcga ctctttcgat gtctccgaca taccggaatt 1141 cgatgaaatt ccagtcgtaa aaagagtgga acaaaaccaa gattctatcg atgcattcag 1201 cacattgtca aaggttgcct ttgcagttcc cgaggtccga gacgatccag tcatttcgca 1261 tgctctcgag atcaaggcgg tagtccgtga actactgtac gaccttttcg aggagacggc 1321 tagtttatcg gacatccaca acaaggacaa taaaattcgg gcgaaattgg acaagaataa 1381 gctattgacc gagcttgata aagtcatcac tacatatttg tatgagaagt acaccaacga 1441 aatggtgggc aatcgacttg tggaatatta taaacgcaat cgcaatgccc gtgtcttcgc 1501 cacactctcg ccggaaaatg aaaaacgatt ccactcccga tacatgcatg ccctggccct 1561 gcttgacagt ctgaagtatc gactggatgt ggccaagcac aagcacgcca tccagatgaa 1621 cagagtgatc ctggatctcc actccgccca gagtgtcgcc tcgatcactg aggaacgctt 1681 ggagcacctg ttccgggaac acctggtccg gcccgaatcg gataatctgc gacgtttagt 1741 tgatcgcgaa ctgagaatga tgacagccaa gcggaacgag atcagcgact ccagactgtt 1801 tctcatcaca agaaagcaca ccttaggtcg cattatgggg aaaatcaagg aacttgacac 1861 actgagtgag accttgagta tcgaagattt cttgtccgtg caaaataatg tgtttgccct 1921 gcaaaagaaa atcgaggaac gcaataccga tctgaagagg atgcgaaccc agttcctcat 1981 ggacgttcat ctcacgcgac acaatcgaga aaaggcgctg gctctggcgg aaaattttga 2041 gctaagtaaa atccggttga agaatgccat gaaaaatcag acagacctgc gtagacgtct 2101 ctacgaagtg aaattggagc ggaagaagat gcgtcagcag tcaagggata tgaccttcca 2161 cggcggcatc ctggcgatgc cctcgctgat gtacgactac gacaacactg tggagcgatt 2221 gaaggagaag cgggaaacgg tggccaagct cagggaaacc ctaaagtcac tccaacgtcg 2281 gctcagctat gtagagggaa gaagtatata gagttgtaag aatccacaaa tcaataaaac 2341 agtacaattt ataat //