Dbfetch
LOCUS NM_136839 2795 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster sprite (sprt), mRNA. ACCESSION NM_136839 VERSION NM_136839.3 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2795) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2795) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2795) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2795) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2795) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2795) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2795) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2795) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2795) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2795) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2795) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2795) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2795) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2795) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2795) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2795) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2795) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2795) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2795) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2795) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-OCT-2015) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 21 (bases 1 to 2795) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 2795) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 23 (bases 1 to 2795) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 24 (bases 1 to 2795) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033778). On Jul 15, 2014 this sequence version replaced NM_136839.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2795 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="2R" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..2795 /gene="sprt" /locus_tag="Dmel_CG30023" /gene_synonym="CG30023; CG9026; Dmel\CG30023" /note="sprite" /map="47F8-47F8" /db_xref="FLYBASE:FBgn0082585" /db_xref="GeneID:246397" CDS 573..2477 /gene="sprt" /locus_tag="Dmel_CG30023" /gene_synonym="CG30023; CG9026; Dmel\CG30023" /note="CG30023 gene product from transcript CG30023-RA; CG30023-PA; sprt-PA" /codon_start=1 /product="sprite" /protein_id="NP_610683.1" /db_xref="FLYBASE:FBpp0087243" /db_xref="GeneID:246397" /db_xref="FLYBASE:FBgn0082585" /translation="MDTGSVVSEPISAHHRAFAKQKSASMTILNPKGCGSAVKYSLHS TAETNQETASTTTTSTHCSTTGRRRKGGSLGGTLSSRSTRSESKELRSALQDREAVIQ NLRIQLCLGKLPRPTGPPLDESEKPAAEQKLNRLKTEAENKRIKIKNLKSALEKLDIT DNIDIRIRQAELEYALGREELQMLSIVEEARALQARLEKSKPEAQTLYNIISSGVSLS LHAVHATSGRWAVQQRTDQPGFYVEWALEGDGLYKGDRILEINGRLVTGKSKEELQKQ VGNSGKCQMVVLRKKSVPIPQKQLDQEKENNMRLQHRISYLEEQVRELQTVKEHHPSQ QQQQQQQQQQNPQQNPQQNPQQTSSNQSQHVTSISISSPPSTPPEKPLIFQRGNYITT LVGGKPIELMGDDMASTQTPPGHVTKTLIKENTHIDLRDRLSHMYSMPSKSLSASKIS INSDSAYMQHHRRDKERHRDRQHRERPRDPLQQQQQLHREHLMSTHARSVEHLNHYNG LDRRRDTPRQSESNTLRARLPSDMRSVKSLDFDSENESKPATETRTTRPTPPKKPLRL SLQRAQSLQTVELHPCADIERKRPMKRVHHNNNNNNKGGESPTGEGQTMLIENCSPMH TASLGRHKLI" ORIGIN 1 tcagacttca tccaatcgtc gacgcgatcg gttgtgctcg cactctccgt gtaatccgaa 61 cccgattttg tgattagccc tccgctgcgc ctgcgtgaat tcgtggacct tcttcaatca 121 acctgaacct acgtgaattt gtgcgttttg tttacttgtt tacttggccc atttgaaagc 181 aaatttcctg catcctgcat aaacagagga aacgcacagc ggaaatagta tgagttatta 241 agtcgctgca aacggaaata attaacaaaa aaaaaataaa actaaatgtg ccgatcgcgt 301 tttagcaacg gtttcgatgc ggtttcaaac acaatcggtt taagcattga catcattgat 361 ttatgtccca agtgtaaata attcgcacaa tacaatacac caaattgagg cttccctccc 421 tccaccaaat caaacaaatc aaatgcaatg aaatgaaatg ttgccattaa tttgcgcaca 481 ttgccattgt tcagagttat tggttgactt ttaactggga tccgtactac tttaagctga 541 gctgtaaacg aagaccacga gggttttcca ttatggacac cggaagtgtg gttagtgaac 601 cgatttccgc gcatcatcgc gccttcgcca aacagaagtc cgcctccatg accattctca 661 atccgaaggg ttgtggcagt gccgtcaagt acagtctgca ctcgactgca gagacgaacc 721 aggagactgc cagtaccacg accacctcta cccattgttc cacaactgga agaaggcgca 781 agggtggctc cctgggcggt actctctcct cgcgatcgac gcgcagcgaa tccaaggaat 841 tgcgatcggc tcttcaggat cgggaggctg tcatccagaa tctgcgtata cagctttgtc 901 tgggcaaact gccacgtccc acgggaccac cgctggatga gtccgagaag ccggcggctg 961 agcaaaaact aaacagactg aagacggagg cggagaataa gcgaattaag atcaagaacc 1021 tgaagagtgc cctggagaag ctggacatca cagacaacat agacatccgc atccgtcaag 1081 ccgaattgga atacgcactc ggcagagaag aactccagat gctctcgatt gtggaggagg 1141 ctcgcgcctt gcaggcacgt ctggaaaagt ccaagcccga ggcgcagacc ctctacaaca 1201 tcatcagctc tggagtctcc ctgagtctgc acgccgtgca tgccacctcg ggaagatggg 1261 cagttcaaca gaggacagac cagccgggtt tctacgtaga atgggcttta gagggtgatg 1321 gcttgtacaa gggcgatcgc attttggaga tcaacggacg actggtaacc ggaaaatcca 1381 aggaagagct gcagaagcaa gtaggaaact ctggcaagtg tcagatggtt gtactccgca 1441 agaagtccgt acctatacca caaaagcaac tagaccagga gaaggagaac aacatgaggc 1501 tgcagcatcg catatcgtac ctggaagagc aggtgcgaga actgcagaca gtcaaggagc 1561 atcatccatc gcaacagcag cagcagcagc agcagcaaca gcaaaatcca cagcaaaatc 1621 cacagcaaaa tccacagcag acatcctcca atcaatctca gcatgtgacc agcatcagca 1681 tatcatcacc tccatcaaca ccgcccgaga aaccgttgat ctttcagcgg ggcaactata 1741 ttaccacttt ggtggggggc aaacccatcg agctgatggg tgacgacatg gcctcgacac 1801 aaacccctcc cggacatgta accaaaacac tgatcaagga gaatacccac atcgatttga 1861 gagatcgtct gtcgcacatg tactccatgc cctccaaatc gctgtccgcc tcgaagatct 1921 cgattaatag cgattctgcc tatatgcagc accatcgacg tgataaggag cgccatcgcg 1981 atcgccagca ccgggaacgc cccagagatc ctctccagca acagcagcaa ctgcatcgcg 2041 aacatctcat gagcacgcac gcacgcagtg tagagcacct gaatcattac aatggactgg 2101 atcgtcgccg agacacgccc cgacaaagtg agtcgaacac acttcgagcc cgcctgccca 2161 gcgatatgag gagtgtaaaa tccctggatt tcgatagcga aaacgaatcg aagcctgcga 2221 ctgagacgcg taccactaga cccactccgc ccaagaaacc cctccggcta tcgctgcaac 2281 gagcccaaag tctgcagacc gtggagctgc acccctgtgc ggatatcgaa cgaaagcggc 2341 ccatgaagag ggtccaccac aacaacaaca acaacaacaa aggtggagaa tcaccgactg 2401 gagagggcca gaccatgctc atcgagaact gcagtcccat gcacacggct tccctcggca 2461 ggcacaagct catctagaaa cccgatccca atccaaccaa aactaattgt taatcgaagt 2521 agcttaatcc tcgaccgatc ctaaccggcg gttaaaccca aaaaacaggc ggacatgtgc 2581 aaaattacag taggcaatat aattttaacc agctcccaag tggaaagttt cttattatgt 2641 agtagcagta gtatgtactt acattctata tcttgtataa gtagggcttg gctatcaaca 2701 tttagtattg agagaatcaa taattaagag tttttgtatg tacgatgatt ttattagcac 2761 aatttacaaa tgtgaataca cgaatatttt cacct //