Dbfetch
LOCUS NM_128945 1218 bp mRNA linear PLN 20-OCT-2022 DEFINITION Arabidopsis thaliana E6-like protein (AT2G33850), mRNA. ACCESSION NM_128945 VERSION NM_128945.3 DBLINK BioProject: PRJNA116 BioSample: SAMN03081427 KEYWORDS RefSeq. SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 1218) AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D., Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V., Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L., Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L., Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H., Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D., Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and Venter,J.C. TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana JOURNAL Nature 402 (6763), 761-768 (1999) PUBMED 10617197 REFERENCE 2 (bases 1 to 1218) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 1218) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter REFERENCE 4 (bases 1 to 1218) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003071). On Sep 12, 2016 this sequence version replaced NM_128945.2. FEATURES Location/Qualifiers source 1..1218 /organism="Arabidopsis thaliana" /mol_type="mRNA" /db_xref="taxon:3702" /chromosome="2" /ecotype="Columbia" gene 1..1218 /locus_tag="AT2G33850" /gene_synonym="T1B8.15; T1B8_15" /db_xref="Araport:AT2G33850" /db_xref="GeneID:817954" /db_xref="TAIR:AT2G33850" CDS 59..862 /locus_tag="AT2G33850" /gene_synonym="T1B8.15; T1B8_15" /inference="Similar to RNA sequence, EST:INSD:EL073830.1,INSD:EL177976.1,INSD:AV526605.1, INSD:AA067543.1,INSD:EH894996.1,INSD:EL181924.1, INSD:EL232823.1,INSD:EH958072.1,INSD:EH871974.1, INSD:EH991245.1,INSD:EH848208.1,INSD:EH873679.1, INSD:EL266838.1,INSD:EL305991.1,INSD:EL092499.1, INSD:DR269483.1,INSD:EH908521.1,INSD:EL288356.1, INSD:DR378796.1,INSD:DR269480.1,INSD:EL106105.1, INSD:F15120.1,INSD:EL289458.1,INSD:EL035291.1, INSD:EH986204.1,INSD:EL012489.1,INSD:EL059665.1, INSD:EH912049.1,INSD:EH953999.1,INSD:EH813266.1, INSD:EH836228.1,INSD:EH856999.1,INSD:DR269484.1, INSD:EL102777.1,INSD:EL118132.1,INSD:EL293185.1, INSD:EL296011.1,INSD:EL097894.1,INSD:EL256865.1, INSD:EH865528.1,INSD:EL071641.1,INSD:DR269485.1, INSD:EL241581.1,INSD:DR269481.1,INSD:AV782632.1, INSD:AV822013.1,INSD:EL264138.1,INSD:EL034912.1, INSD:EL192433.1,INSD:EL300724.1,INSD:DR269482.1, INSD:EH801857.1,INSD:EL066347.1,INSD:AI100577.1, INSD:AV534282.1,INSD:EL059066.1,INSD:EH827361.1, INSD:EL000023.1,INSD:EH990678.1,INSD:EL100715.1, INSD:EL014846.1,INSD:BP853464.1,INSD:EL009511.1, INSD:EH885016.1,INSD:EH961722.1,INSD:EL245507.1, INSD:EL135903.1,INSD:AV520354.1,INSD:EH933263.1" /inference="similar to RNA sequence, mRNA:INSD:AY054596.1,INSD:AY084244.1,INSD:AY081482.1" /note="unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28400.1); Has 3053 Blast hits to 2119 proteins in 133 species: Archae - 6; Bacteria - 52; Metazoa - 135; Fungi - 96; Plants - 73; Viruses - 2; Other Eukaryotes - 2689 (source: NCBI BLink)." /codon_start=1 /product="E6-like protein" /protein_id="NP_565775.1" /db_xref="Araport:AT2G33850" /db_xref="GeneID:817954" /db_xref="TAIR:AT2G33850" /translation="MAFSTSSCLFFFLLTLVLFSTQISARNSYSFGKFQREDPKEQNP NNLVPIETNEKKEPDDQNPAFIPQSENGYGLYGHETTDNNNEELNNNKYEDNVNYDDS FSTPSLSETAQTQESYKNYKESYPKTTEIYDNNKDTSYYENSNAYGTDKRDNDINDPY KGYSNKDTSYYENPNTYGTEKREKEPAYRGYNNNVERQGMSDTRYMANGKYYYDLDDD RNHGRFYQNHYYNYKPTGYNEKKSNFKNPYDSNQQSEMLGEEQGDQITP" ORIGIN 1 atatataaac actcccactt tctctcacaa acccacaaca ctgactcaca tcatcaccat 61 ggctttttcc actagctcat gtctcttctt cttcctctta acacttgttc ttttctcaac 121 ccaaatcagt gcaagaaaca gctactcctt tggcaagttc caaagagagg accccaaaga 181 gcaaaaccct aacaatcttg tccctatcga aaccaacgag aagaaagagc cagatgacca 241 gaaccctgcc tttatccccc agtccgaaaa cgggtacggc ttgtatggtc acgagacaac 301 cgacaacaac aatgaagagt tgaacaataa caagtacgag gacaacgtta actacgacga 361 ctctttctcc acccccagcc taagcgaaac ggctcaaacc caagaatctt acaagaacta 421 caaagagagc tatcctaaga ctaccgagat ttacgacaac aacaaggaca cgagctacta 481 cgaaaactcg aatgcttacg ggacagataa gagagataat gatattaatg atccgtacaa 541 gggttatagc aacaaggaca cgagctacta cgaaaacccc aatacttacg ggacggagaa 601 gagagagaag gagccggcgt acaggggtta taacaacaac gtagagagac aagggatgag 661 cgatacgagg tatatggcga atggtaagta ctattacgac cttgacgatg acagaaacca 721 cggccgtttc taccagaatc attactacaa ctacaagccc accggttaca atgagaagaa 781 gtccaacttc aagaatccat acgattccaa ccaacagtcc gagatgttgg gggaagagca 841 aggagatcag atcactccat gagcatcacc gcatgaaaca ataataagta tctgcttttg 901 tattctcgat ttttgtttca agtggtttaa tcatcagtca aaagtataat tttaatttgc 961 atataaaatt tggaaaaaaa aatatatata ttatatggcg atgcttgtta attatgataa 1021 tgttctgatg ctggttcaat ctctattctt ctttatatag agattaaaat gttttgcatt 1081 atgtacaaga aaatataaga tactaatatc aatgtcgtct gactattgaa gctgttgatg 1141 attgtttctg tattagtcga ttgaccataa tttatctcaa agaaaatgtg gatagtcaat 1201 gattagtttg cgattgaa //