Dbfetch
LOCUS NM_078139 2470 bp mRNA linear INV 22-NOV-2023 DEFINITION Caenorhabditis elegans ANK repeat-containing protein nipk-1 (nfki-1), mRNA. ACCESSION NM_078139 VERSION NM_078139.5 DBLINK BioProject: PRJNA158 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 2470) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 2470) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 2470) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 2470) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003284). On Sep 4, 2019 this sequence version replaced NM_078139.4. FEATURES Location/Qualifiers source 1..2470 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="X" gene 1..2470 /gene="nfki-1" /locus_tag="CELE_C33A11.1" /db_xref="GeneID:181625" /db_xref="WormBase:WBGene00007877" CDS 3..1838 /gene="nfki-1" /locus_tag="CELE_C33A11.1" /standard_name="C33A11.1" /note="Confirmed by transcript evidence" /codon_start=1 /product="ANK repeat-containing protein nipk-1" /protein_id="NP_510540.1" /db_xref="EnsemblGenomes-Gn:WBGene00007877" /db_xref="EnsemblGenomes-Tr:C33A11.1.1" /db_xref="EnsemblGenomes-Tr:C33A11.1.2" /db_xref="GeneID:181625" /db_xref="GOA:G5EDE9" /db_xref="InterPro:IPR002110" /db_xref="InterPro:IPR020683" /db_xref="InterPro:IPR028320" /db_xref="InterPro:IPR036770" /db_xref="UniProtKB/Swiss-Prot:G5EDE9" /db_xref="WormBase:WBGene00007877" /translation="MATVAPKGNCLVARAIPSDSHADQLTDLLCKLSVNGDANQKSVN KFESQHGVTPSDFRDIQNIRSSALAKKTKTSKFQLDGVTLFADLTPNSKSKKKTENQE TKEKDEEAEEKKDGPPKDDKELKMKKEKEQEDENAELDEQKKDGDLLGRGPVHNVRVA TGGSHPYHRAQIPYGCAAQTPITDISAYTGYGSGYECGSTWSLSPDTTIGSISASTTP DTVLSSDGYGSASPPQHSPKESLQSPFSDISSADTSRVLTPENNELPESLQDFILQYS NQYTKEESIRGRPPSADSGVSSPMSARSAPYASPHVPQGTCSGPTTPSFNQTRLSPRT SENGITAKQRLNAIIPESDLATGFHWACTTWKNVLTNRDADGDTPLHIVAAHNDLGKI YALCETLRKTMNENDDNVFNVSNNFGETPLYVAVLQRSIEVVEYLLELGASPNSRSSR AVGDSPLHFATARGMNNMVEALLSKREIRVNETNDDGQTSLLCAVKMHGMMDEQTQHK IDNKSIIEMLIKAGADPTIAETSTGKTIVHHAVDKMDVELLDFLKTVVNEDTFTELAN LSDFHGDTAVDLLCSSTQNEDTNNVRENLYIRLLTSGAVPNKSRA" ORIGIN 1 ccatggcaac cgttgccccc aagggaaact gccttgtcgc tcgggcgata ccgtccgata 61 gccacgccga ccagctcacc gatctgttgt gcaaactgtc cgtcaatggt gacgcgaacc 121 aaaaaagtgt caataagttc gaatcgcagc acggcgtaac cccatcggat ttccgtgaca 181 ttcaaaacat cagatcatct gctttggcga agaagacaaa aacttccaaa ttccagcttg 241 acggggtgac tctgttcgct gatctcactc caaacagcaa gtctaaaaag aagactgaaa 301 accaggaaac caaagaaaaa gatgaagaag ccgaggaaaa gaaagatgga ccgccaaaag 361 atgacaaaga gctcaagatg aaaaaagaaa aagagcagga agatgaaaac gcggaactcg 421 acgaacagaa aaaagatggc gatcttttag gcagaggccc agtgcacaat gttcgtgttg 481 ccacaggagg aagtcatcca tatcacagag cccaaatacc ttatggatgc gccgcacaaa 541 cacctatcac cgacatttca gcatacactg gctacggtag cggctatgaa tgcggaagca 601 cttggtcgct aagcccagac accacgattg ggtcgatatc cgcgtcgaca actcctgaca 661 ctgtgttgtc atctgatgga tacggatcag catctccgcc tcaacacagt ccaaaagaat 721 cgttgcagag tccgttttcc gacatctcgt ctgctgatac ttcgcgcgtc ctgaccccgg 781 agaataacga gttgccggag agtctgcagg atttcatcct gcaatactcg aaccagtaca 841 ccaaagagga gagcatccga ggacgtccac catctgcaga ttctggggtg tcgtctccga 901 tgtcggctcg ttcagctcca tatgcatcac cacacgtgcc acaaggaacc tgcagtggcc 961 caactacgcc gtcgttcaac cagacccgcc tcagtcctcg cactagcgaa aatggaatca 1021 cagctaaaca gcgtctcaac gctattattc ctgaatccga tcttgcaact ggatttcact 1081 gggcctgcac tacatggaag aacgtgctta ctaaccgcga tgcagatggc gacactccac 1141 tccatattgt tgcagctcac aatgacctcg gtaaaattta cgcgttgtgt gagactcttc 1201 gtaagacgat gaacgaaaac gacgacaatg tgttcaatgt gagcaataac tttggagaga 1261 caccacttta tgtcgcggtt ttgcaaagaa gcattgaggt tgttgagtac ttgcttgagc 1321 ttggagcttc tccaaacagt cgtagctctc gcgcagttgg agattcacca cttcatttcg 1381 ccacagctcg tggaatgaac aatatggttg aggccctgct cagcaagcga gagattcgtg 1441 tgaatgaaac caatgatgat ggtcaaactt cactgttgtg tgcggttaaa atgcatggaa 1501 tgatggatga gcagacacag cacaaaattg acaacaagtc catcatcgaa atgctcatca 1561 aggctggagc agatccaacg attgctgaaa cttcaactgg aaagacaatt gtacatcatg 1621 ctgtcgacaa gatggacgtg gaacttttag atttcttaaa aaccgttgtc aacgaagaca 1681 cgttcaccga gttggcaaat ctctccgact tccatggaga caccgcagtc gaccttttgt 1741 gtagttccac ccagaacgag gacacgaata atgtccgcga aaatctatac atccgactcc 1801 tgacctccgg tgcagtcccg aacaagtcga gagcttgagc tctattcagc ttcattcaca 1861 ttttttttga cgttgttgca taatgccatc aaaaccacct atatttgact cttcgttata 1921 gtttattttt tattttgttg atctcaaaac cacccctcta atctaaaaaa ttaaactttg 1981 aaaataatca aaaaattatt ttttaaaagt acttcattaa aattaatgtg ttcatttttc 2041 cttacaacga ccgttaagct attccactca acgattgtta agtctacagt tcaacctctc 2101 aattgaatat tgaaaataat tatttaaaac gtttacacct ccaacttcaa cgtagtttct 2161 cgttcacatt ctgaagtata tgctagttgc tggtacataa agtccatctc attccttttt 2221 ttcttttctt atttcacgtt tttaccttct ccactcccct tcctctctct ctctcgaaat 2281 tttgtgctat attccccgta ctaggtggta caacgtcaca gtttctctgt tcacccatcc 2341 ccttcaatat tccttcattt ttcacaaaaa caagcagctt ctgtcatttt tcgcattttt 2401 attctttgtt gctaacctgt cctatgtaga taaaacagga agaatgaagt tcaggaataa 2461 aatattaacc //