Dbfetch
LOCUS NM_075830 1749 bp mRNA linear INV 22-NOV-2023
DEFINITION Caenorhabditis elegans AMP-dependent synthetase/ligase
domain-containing protein (C25G6.3), partial mRNA.
ACCESSION NM_075830
VERSION NM_075830.4
DBLINK BioProject: PRJNA158
KEYWORDS RefSeq.
SOURCE Caenorhabditis elegans
ORGANISM Caenorhabditis elegans
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
Caenorhabditis.
REFERENCE 1 (bases 1 to 1749)
AUTHORS Sulson,J.E. and Waterston,R.
CONSRTM Caenorhabditis elegans Sequencing Consortium
TITLE Genome sequence of the nematode C. elegans: a platform for
investigating biology
JOURNAL Science 282 (5396), 2012-2018 (1998)
PUBMED 9851916
REMARK Erratum:[Science 1999 Jan 1;283(5398):35]
REFERENCE 2 (bases 1 to 1749)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1749)
AUTHORS WormBase.
CONSRTM WormBase Consortium
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics
Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org
REFERENCE 4 (bases 1 to 1749)
AUTHORS Sulson,J.E. and Waterston,R.
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger
Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute
at Washington University, St. Louis, MO 63110, USA
COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This
record is derived from an annotated genomic sequence (NC_003284).
On Sep 4, 2019 this sequence version replaced NM_075830.3.
COMPLETENESS: incomplete on the 3' end.
FEATURES Location/Qualifiers
source 1..1749
/organism="Caenorhabditis elegans"
/mol_type="mRNA"
/strain="Bristol N2"
/db_xref="taxon:6239"
/chromosome="X"
gene 1..>1749
/gene="C25G6.3"
/locus_tag="CELE_C25G6.3"
/db_xref="GeneID:182919"
/db_xref="WormBase:WBGene00016108"
CDS 13..1749
/gene="C25G6.3"
/locus_tag="CELE_C25G6.3"
/standard_name="C25G6.3"
/note="Partially confirmed by transcript evidence"
/codon_start=1
/product="AMP-dependent synthetase/ligase
domain-containing protein"
/protein_id="NP_508231.2"
/db_xref="EnsemblGenomes-Gn:WBGene00016108"
/db_xref="EnsemblGenomes-Tr:C25G6.3"
/db_xref="GeneID:182919"
/db_xref="GOA:Q18176"
/db_xref="InterPro:IPR000873"
/db_xref="InterPro:IPR042099"
/db_xref="UniProtKB/TrEMBL:Q18176"
/db_xref="WormBase:WBGene00016108"
/translation="MTDFNIDQYEITVTVDDSSSAKDEDEGTIKPKLYPDLKKLNKTT
EDNDKTTDCTIVLKPSPTPTQENTETPENPPEKAPENANFREWLLDNLSYHRNYNPAK
IALIEEISEVRCVTYEELVDGSKRTANYMSHHGVKNGDRILMCMENTVEYVLYQLGGF
LLGAIPVLINPSHIASEKLSDIGCTTAIVDFEHYGHMLRISQSTLQSIERVFVLAEDI
AAISLARHVWVIDAFGFLGFPPNYVCDQFIEESNDSVAFIIPGSLENDQYISHSQESG
FHLCHDYFEQLFGMLKKTEQLGSKNHLITDGLHCHDALSYLYTILTKGESCILAESTM
DVWRASLLDRIAGIIEQYKVTLLFSNSQLLKCFIKYEVHKIYNLSSLEIVANHGAVVS
VATAKKVKKILDVTLIQAYSAAEFGVASFGDFDETLDKQLVNCGHSIDDVKIKVIAHM
ETDKEMAKGKWGQVILSGRQLLKEYIGNKELNTSRKFGKSWFKTGDYGMIDENDRVHI
EGAISDLITAQNKLVSSEMMESIICEHKMVHDVVVMQNDQHVWCGVLLKNENETPSGE
TLEKLLKSKKVK"
ORIGIN
1 actcctcaac aaatgaccga cttcaatatt gatcaatacg agattacggt cacagtcgat
61 gatagttcca gcgctaagga cgaagacgag ggcacgatca agcctaagtt gtatcctgat
121 ttaaaaaagc taaacaaaac caccgaagat aacgataaaa cgacagattg tacgatagtt
181 ttaaagccga gcccgacacc gacccaggaa aacacagaaa ccccagaaaa tcctcctgaa
241 aaggctccag aaaatgcgaa cttccgagaa tggcttcttg acaatttgag ctatcacaga
301 aactataatc cagcgaaaat tgcattgatc gaagaaatct cagaagtacg atgtgtaacc
361 tatgaggaac ttgtcgatgg gtccaaacga actgcaaact acatgtcaca tcacggtgtt
421 aaaaacggag atcgaatctt aatgtgcatg gagaacactg tggagtacgt gttgtaccaa
481 ctcggtggct tcctgcttgg tgcgattcca gtactaatca atccaagcca tattgcttcc
541 gaaaaactca gcgacatcgg ctgcacaaca gctatcgtgg attttgagca ctacggccac
601 atgctcagaa tttcacaaag tacacttcaa agtattgaga gagtgttcgt tttggccgag
661 gatattgctg cgattagtct tgctcggcac gtttgggtga ttgatgcttt tgggttttta
721 ggattcccac caaactatgt ctgcgaccag tttattgaag aatcgaatga cagtgtggca
781 tttattatac ccggaagtct ggaaaacgat caatacatct cacattcaca ggaaagtgga
841 ttccacctgt gccacgacta cttcgagcag ctatttggta tgctaaaaaa aactgaacag
901 cttggatcca aaaatcacct aatcactgac gggcttcact gtcatgacgc tttatcctac
961 ctctacacaa tccttacaaa aggcgaaagt tgtatacttg cggagtcgac gatggatgtc
1021 tggagagcgt ctttattaga tcgaatcgct gggattatcg agcaatataa ggttacccta
1081 ctcttctcaa actcccaact gctgaaatgt tttatcaaat atgaagttca caaaatctac
1141 aacttatcat cactcgaaat tgtagccaac catggggctg tggtatcagt ggccactgcc
1201 aaaaaagtca agaaaatctt agacgtcacc cttatccaag catactctgc cgcagagttt
1261 ggtgttgcca gttttggaga ttttgatgaa acattggata agcagctcgt caactgtggg
1321 cactcaattg atgatgtcaa aatcaaagta atagcccata tggaaactga caaggaaatg
1381 gcaaagggga agtgggggca agttattttg agtgggcggc agttgctcaa agagtacatt
1441 ggaaataagg agctgaacac aagtaggaag ttcggaaagt cgtggttcaa aactggtgat
1501 tacggtatga ttgatgagaa tgacagggta catattgaag gtgcaatttc tgatcttata
1561 actgcacaaa acaagctggt ttcttcagag atgatggaaa gtataatatg cgagcataaa
1621 atggtccatg acgtggttgt gatgcaaaat gatcaacatg tgtggtgtgg ggtgctgctg
1681 aaaaatgaaa atgaaactcc aagcggggag acgttggaaa agttgttaaa aagtaagaaa
1741 gttaaatag
//