Dbfetch
LOCUS NM_071382 1680 bp mRNA linear INV 22-NOV-2023
DEFINITION Caenorhabditis elegans Intermediate filament protein ifc-1 (ifc-1),
mRNA.
ACCESSION NM_071382
VERSION NM_071382.7
DBLINK BioProject: PRJNA158
KEYWORDS RefSeq.
SOURCE Caenorhabditis elegans
ORGANISM Caenorhabditis elegans
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
Caenorhabditis.
REFERENCE 1 (bases 1 to 1680)
AUTHORS Sulson,J.E. and Waterston,R.
CONSRTM Caenorhabditis elegans Sequencing Consortium
TITLE Genome sequence of the nematode C. elegans: a platform for
investigating biology
JOURNAL Science 282 (5396), 2012-2018 (1998)
PUBMED 9851916
REMARK Erratum:[Science 1999 Jan 1;283(5398):35]
REFERENCE 2 (bases 1 to 1680)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1680)
AUTHORS WormBase.
CONSRTM WormBase Consortium
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics
Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org
REFERENCE 4 (bases 1 to 1680)
AUTHORS Sulson,J.E. and Waterston,R.
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger
Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute
at Washington University, St. Louis, MO 63110, USA
COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This
record is derived from an annotated genomic sequence (NC_003283).
On Sep 4, 2019 this sequence version replaced NM_071382.6.
FEATURES Location/Qualifiers
source 1..1680
/organism="Caenorhabditis elegans"
/mol_type="mRNA"
/strain="Bristol N2"
/db_xref="taxon:6239"
/chromosome="V"
gene 1..1680
/gene="ifc-1"
/locus_tag="CELE_F37B4.2"
/db_xref="GeneID:178747"
/db_xref="WormBase:WBGene00002055"
CDS 3..1505
/gene="ifc-1"
/locus_tag="CELE_F37B4.2"
/standard_name="F37B4.2"
/note="Confirmed by transcript evidence"
/codon_start=1
/product="Intermediate filament protein ifc-1"
/protein_id="NP_503783.1"
/db_xref="EnsemblGenomes-Gn:WBGene00002055"
/db_xref="EnsemblGenomes-Tr:F37B4.2"
/db_xref="GeneID:178747"
/db_xref="WormBase:WBGene00002055"
/translation="MSLYGGIPTNLVSGMSSAGAICTTQIRDAREREKREIGLLNDRL
ADYIEKVRFLKAQNHVLSHDIEILRRGFSGGGHISSFFESEISNCTVISERILSSRTK
FQADITGLEGEIEIYRKKWLEALKVVRSHREDHHVNLDKLAEVEAQIALFNRKIRIVE
EDVLRIRRETGGIQNDIGRIHSQIHAEIALKNERHHSVQMLLQRVQVIQTENSSRIEQ
ELIYIHRDTTLENRDYFRQELQAAMRDIRANYEAMSIRSREDIEIAYRKRIDEIRVIP
AHVHIEDYREELLSIRTTLSTTHSRLAEIESRNAWLLTTITDLKHQQAEEARIFEATL
DAKQATYEQFKERCTELSIQMEKLCDHETSLQAELERYRVLLNGANVTTYVSNSTGAA
GYRSSTHVATTTTTTTNGYSSGYTAGGYTSGGYTTGGYTRGITAGGAVGGISTGGYIG
RSSSSHGISVGGNIGGVSVGGHINGYHASGDISAAGRHHESSYSYSSSNN"
ORIGIN
1 tcatgtcctt gtacggaggt attccgacga atttggtgag cggcatgtca tctgccggag
61 ccatttgcac aacgcaaatc agggatgctc gtgagcgtga gaagagagag atcgggctct
121 tgaacgatcg cttggctgat tatatcgaaa aggttcgctt cctcaaagca caaaaccatg
181 tgctctccca tgacattgag attcttcgca gaggattctc gggcggtggc cacatttcaa
241 gcttcttcga gtcagaaatt tcgaactgca cagtcatttc tgagcgaatc ttgtcatcgc
301 gcacaaagtt ccaagccgac attaccgggc tagagggaga gatcgagatc taccgcaaga
361 agtggcttga ggctctcaaa gttgtgagat ctcatcgcga ggatcatcat gtcaatttgg
421 acaagctcgc cgaggttgaa gcccaaatcg cgctgttcaa tcgcaagatc cgtattgttg
481 aggaggatgt gctcagaatt cgtcgagaga ctggtggcat tcaaaatgat attggcagaa
541 ttcattcgca aattcacgct gagatcgcgt tgaaaaacga acgccaccac agtgtccaga
601 tgcttctcca acgcgtccag gttatccaaa ccgaaaactc atccagaatc gagcaggagc
661 tcatctacat ccaccgtgat accacactcg aaaaccgaga ctacttccga caagagttgc
721 aggcggcgat gagagacatt cgtgccaact atgaagcgat gagcattcgt tcccgcgagg
781 acattgaaat cgcctaccgc aagagaatcg atgagatcag agttatccca gcacacgtac
841 atattgaaga ctacagggag gaactgttat ccattcgaac gacacttagc acgacgcaca
901 gtagattagc ggagattgag agcagaaacg cgtggctctt gacgacgatc acagatctta
961 aacaccaaca agcagaggaa gcaagaatct tcgaggcaac cctggacgca aagcaagcaa
1021 cctatgaaca gttcaaggag cgctgcacgg aactcagcat acagatggag aagctttgcg
1081 atcatgaaac gtcgctacaa gcagagctgg aacgctacag agtactgctc aacggagcca
1141 acgtgacaac ctatgtgtcc aactcgactg gagccgctgg ttaccgatcc tccacccacg
1201 tcgccactac tacaaccaca acgaccaatg ggtattctag tggatacacg gctggaggct
1261 acacatccgg aggctacaca accggaggat acactcgtgg aatcaccgcc ggtggtgctg
1321 tcggcggaat atccactggc ggatacatcg gacggtcctc ctcctcacac ggaatatccg
1381 tcggtggtaa cattggcggt gtctcagttg gaggtcacat caatggctac catgcttcgg
1441 gagacatcag tgcagctggt agacaccacg agagctccta ctcctactct tcgtccaaca
1501 actaggcagt gaatcgaaac tgttcattgc cgtcaaatag tgttgttcca tacaatacca
1561 atcagctttt tctgtttttt gttgttgttc tagaaaactt tcaaagcgtg atggcgatag
1621 aaagtttcaa attcctgtct tgttcaaaaa caaatgtatc aaataaattg ttgtcatgtc
//