Dbfetch
LOCUS NM_070375 1902 bp mRNA linear INV 22-NOV-2023
DEFINITION Caenorhabditis elegans HAlF transporter (PGP related) (haf-8),
partial mRNA.
ACCESSION NM_070375
VERSION NM_070375.1
DBLINK BioProject: PRJNA158
KEYWORDS RefSeq.
SOURCE Caenorhabditis elegans
ORGANISM Caenorhabditis elegans
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
Caenorhabditis.
REFERENCE 1 (bases 1 to 1902)
AUTHORS Sulson,J.E. and Waterston,R.
CONSRTM Caenorhabditis elegans Sequencing Consortium
TITLE Genome sequence of the nematode C. elegans: a platform for
investigating biology
JOURNAL Science 282 (5396), 2012-2018 (1998)
PUBMED 9851916
REMARK Erratum:[Science 1999 Jan 1;283(5398):35]
REFERENCE 2 (bases 1 to 1902)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1902)
AUTHORS WormBase.
CONSRTM WormBase Consortium
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics
Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org
REFERENCE 4 (bases 1 to 1902)
AUTHORS Sulson,J.E. and Waterston,R.
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger
Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute
at Washington University, St. Louis, MO 63110, USA
COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This
record is derived from an annotated genomic sequence (NC_003282).
COMPLETENESS: incomplete on both ends.
FEATURES Location/Qualifiers
source 1..1902
/organism="Caenorhabditis elegans"
/mol_type="mRNA"
/strain="Bristol N2"
/db_xref="taxon:6239"
/chromosome="IV"
gene <1..>1902
/gene="haf-8"
/locus_tag="CELE_Y57G11C.1"
/db_xref="GeneID:190369"
/db_xref="WormBase:WBGene00001818"
CDS 1..1902
/gene="haf-8"
/locus_tag="CELE_Y57G11C.1"
/standard_name="Y57G11C.1"
/note="Product from WormBase gene class haf;
Partially confirmed by transcript evidence"
/codon_start=1
/product="HAlF transporter (PGP related)"
/protein_id="NP_502776.1"
/db_xref="EnsemblGenomes-Gn:WBGene00001818"
/db_xref="EnsemblGenomes-Tr:Y57G11C.1"
/db_xref="GeneID:190369"
/db_xref="GOA:O18227"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR011527"
/db_xref="InterPro:IPR017871"
/db_xref="InterPro:IPR027417"
/db_xref="InterPro:IPR036640"
/db_xref="InterPro:IPR039421"
/db_xref="UniProtKB/TrEMBL:O18227"
/db_xref="WormBase:WBGene00001818"
/translation="MRISCSKSVPFSDLININTGAAGEIVDKNDDEEENRLPLSEHLW
EIVKLCGKQWRWFVPAYTLLILDCALNLIEPALYGQMMTNAIQMKSFDIIKRACLLLA
LIQFSEATCKSACYFFMQYAEKLTARNIRIQLFRSILHQEISFFDENKTGQLVSRITH
DSESISNTLPVHIETLVNNLFMFFGSIPIMFCYSWQLTLTSFIEFPITLLMTRYYGLA
VEKLSEKENDATAASNETVEEVLSAIRTVRSFAAENFEQKRYTKNTEDWFKISTKTVT
LGTIYNYFWALMLRSQDVIRYLYGGYLALNGRMAPEALLTFIFYHWRLHTAINAFSSL
FSGVMKTIGLSRKVIHLINRKPQLDYDFGTETPEIQGKIEFEVVEFAYPTRKTVNVIN
GINLSIESGKTVALVGPSGNGKSTLVSLIQQFYTPQSGRILTDGIPIQNINHQHYHSN
IALVAQEPTLFSGTIRENILFGIENGTEEAMLKAAEMANVHEFVSKMDDGYDTKCGEK
GVQMSGGQKQRIAIARALIRNPRVLILDEATSALDSESEGMVQEALNKCAKERTVIVI
AHRLSTVRKAQKIAVIENGSVKEMGCHDELMENQDGLYYKLVSKQLGSIVDTNIFNCF
DMLIFFVLF"
ORIGIN
1 atgcgaatca gttgttcaaa atcagtgcct ttttcagatt taataaatat aaatacaggc
61 gctgccgggg aaatcgtgga taaaaatgac gatgaagaag aaaaccgact cccattatcc
121 gaacatttat gggaaattgt gaagttatgt gggaagcagt ggagatggtt tgttccagca
181 tatacacttc tgattctgga ttgtgctttg aaccttatcg aaccagcctt gtatggtcaa
241 atgatgacaa atgcgattca aatgaaatct tttgatatta tcaaacgagc ctgcctactg
301 ctggcactca tccaattctc agaagctaca tgcaaatcgg cttgttactt tttcatgcaa
361 tacgctgaaa agttaactgc aaggaatatt cgtatccaac ttttccgttc aattctccat
421 caggaaatct cattttttga tgagaataaa acaggacaat tggtgtcaag aatcacacat
481 gactcggaat ccatttcaaa tactcttcca gttcacattg aaacacttgt caacaatcta
541 ttcatgtttt ttggatccat tccaatcatg ttttgttatt catggcagtt gacattaact
601 tcattcattg aatttccaat tactctgtta atgacaagat attatggatt ggcagtggag
661 aagctatcag aaaaggaaaa tgatgcaact gcagcttcaa atgaaactgt tgaagaagta
721 ctttcagcta tccgaacagt tagatcattc gctgctgaga atttcgaaca aaaacgatac
781 actaagaata cggaagactg gttcaagatt agcacaaaga ctgtgacact tggaactatc
841 tacaactatt tttgggctct tatgttacgt tcgcaagatg ttattcgata tttatatgga
901 ggatatttgg cattaaatgg gagaatggct ccggaggcat tgctaacttt tatcttttat
961 cactggagac ttcatactgc gatcaatgcg ttcagttccc tattctctgg cgtcatgaaa
1021 accattggtc tatcccgaaa agtgatacat ctgatcaata gaaaaccaca acttgactat
1081 gattttggga ctgaaactcc agaaattcaa ggaaaaattg agtttgaagt agttgaattt
1141 gcatatccga ctcggaaaac agtaaatgta ataaatggaa tcaacttatc aattgaatca
1201 ggaaaaactg ttgccttggt tggaccgagt ggaaatggga aatctacttt ggtttcttta
1261 attcaacaat tttatactcc acaatctgga agaatattga ctgatggaat tccaattcag
1321 aatattaatc atcaacatta tcactcaaat attgcccttg ttgctcaaga accaacatta
1381 ttctcaggaa ctatcagaga aaatattctt tttggaattg aaaatggaac agaagaagct
1441 atgttgaaag ccgctgaaat ggcaaatgtt catgaatttg tgtcaaaaat ggatgatgga
1501 tatgatacaa agtgtggaga gaagggtgtt caaatgtctg gaggtcagaa gcaacgaatt
1561 gcaatcgcaa gagctcttat cagaaatcca cgtgttttaa tccttgatga agccacgtca
1621 gcattagatt cagaatctga aggaatggtt caagaagcat tgaataaatg tgcaaaagaa
1681 cgtactgtta tagtgattgc acatcgcctt tcaactgtac gaaaagccca gaaaattgct
1741 gtaattgaaa atggaagtgt gaaggagatg ggatgtcatg atgaattgat ggagaatcag
1801 gatgggcttt actacaaatt agttagcaag caacttggtt caattgttga tacaaatatt
1861 tttaactgct tcgatatgct aatatttttt gtcctttttt ag
//