Dbfetch

LOCUS       NM_067512               1798 bp    mRNA    linear   INV 22-NOV-2023
DEFINITION  Caenorhabditis elegans Sphingosine-1-phosphate lyase (spl-1), mRNA.
ACCESSION   NM_067512
VERSION     NM_067512.8
DBLINK      BioProject: PRJNA158
KEYWORDS    RefSeq.
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 1798)
  AUTHORS   Sulson,J.E. and Waterston,R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282 (5396), 2012-2018 (1998)
   PUBMED   9851916
  REMARK    Erratum:[Science 1999 Jan 1;283(5398):35]
REFERENCE   2  (bases 1 to 1798)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1798)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  TITLE     Direct Submission
  JOURNAL   Submitted (29-OCT-2023) WormBase Group, European Bioinformatics
            Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org
REFERENCE   4  (bases 1 to 1798)
  AUTHORS   Sulson,J.E. and Waterston,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger
            Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute
            at Washington University, St. Louis, MO 63110, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by WormBase. This
            record is derived from an annotated genomic sequence (NC_003282).
            
            On May 27, 2020 this sequence version replaced NM_067512.7.
FEATURES             Location/Qualifiers
     source          1..1798
                     /organism="Caenorhabditis elegans"
                     /mol_type="mRNA"
                     /strain="Bristol N2"
                     /db_xref="taxon:6239"
                     /chromosome="IV"
     gene            1..1798
                     /gene="spl-1"
                     /locus_tag="CELE_Y66H1B.4"
                     /db_xref="GeneID:176857"
                     /db_xref="WormBase:WBGene00004981"
     CDS             7..1665
                     /gene="spl-1"
                     /locus_tag="CELE_Y66H1B.4"
                     /standard_name="Y66H1B.4"
                     /note="Confirmed by transcript evidence"
                     /codon_start=1
                     /product="Sphingosine-1-phosphate lyase"
                     /protein_id="NP_499913.1"
                     /db_xref="EnsemblGenomes-Gn:WBGene00004981"
                     /db_xref="EnsemblGenomes-Tr:Y66H1B.4"
                     /db_xref="GeneID:176857"
                     /db_xref="WormBase:WBGene00004981"
                     /translation="MDSVKHTTEIIVDLTKMHYHMINDRLSRYDPVVLVLAAFGGTLV
                     YTKVVHLYRKSEDPILKRMGAYVFSLLRKLPAVRDKIEKELAAEKPKLIESIHKDDKD
                     KQFISTLPIAPLSQDSIMELAKKYEDYNTFNIDGGRVSGAVYTDRHAEHINLLGKIYE
                     KYAFSNPLHPDVFPGARKMEAELIRMVLNLYNGPEDSSGSVTSGGTESIIMACFSYRN
                     RAHSLGIEHPVILACKTAHAAFDKAAHLCGMRLRHVPVDSDNRVDLKEMERLIDSNVC
                     MLVGSAPNFPSGTIDPIPEIAKLGKKYGIPVHVDACLGGFMIPFMNDAGYLIPVFDFR
                     NPGVTSISCDTHKYGCTPKGSSIVMYRSKELHHFQYFSVADWCGGIYATPTIAGSRAG
                     ANTAVAWATLLSFGRDEYVRRCAQIVKHTRMLAEKIEKIKWIKPYGKSDVSLVAFSGN
                     GVNIYEVSDKMMKLGWNLNTLQNPAAIHICLTINQANEEVVNAFAVDLEKICEELAAK
                     GEQKADSGMAAMYGMAAQVPKSVVDEVIALYIDATYSAPPSTSN"
ORIGIN      
        1 gttacaatgg attcggttaa gcacacaacc gaaattattg tcgacttgac aaaaatgcac
       61 tatcacatga taaatgatag actttctcgg tatgatccgg ttgttctagt gttggccgct
      121 tttgggggta cccttgtcta tacaaaagtc gtccatttgt accgaaaaag cgaggatcca
      181 attttgaaac gcatgggagc ttatgtattc tcacttcttc gaaaacttcc agctgttcgg
      241 gataaaatcg aaaaagagct ggctgctgag aagccaaagc ttattgaatc gattcataag
      301 gatgataagg acaagcaatt catttccact cttcccatcg ctccattatc tcaggactca
      361 attatggaac tggcgaaaaa atatgaggat tacaacacat ttaacattga cggaggacga
      421 gtatctggag cggtttatac tgatcgtcat gctgaacaca ttaatttgct tggaaagatt
      481 tacgaaaagt atgcgttctc gaatcccctc caccctgacg tctttccggg agctcgtaaa
      541 atggaggcag aacttattcg aatggttctg aacctgtata atggaccaga agattctagt
      601 ggaagtgtaa cttctggtgg tactgaaagt attattatgg catgcttttc gtatcgaaat
      661 cgtgcacact ctcttggcat tgaacatcca gttattttgg catgtaaaac agctcacgcg
      721 gcatttgata aggccgccca tctatgcgga atgcgtcttc gccacgttcc agttgattcg
      781 gataatcgtg tcgatttaaa agaaatggag agactaattg attcgaatgt ttgtatgttg
      841 gttggctcag cgcctaactt cccatcaggc acaattgatc caattccgga aattgctaag
      901 ctcggcaaaa agtatggaat cccggtccac gtggacgcat gtcttggtgg attcatgatt
      961 ccatttatga atgacgccgg atacctgatt cctgtattcg atttcagaaa tcccggtgtt
     1021 acatctattt cgtgtgatac tcataagtac ggatgcacac cgaaaggttc atcgattgtc
     1081 atgtatcgtt ccaaggaact tcatcacttc cagtatttct cggttgccga ttggtgtgga
     1141 ggcatctatg ccaccccgac tattgcagga tcccgagctg gagccaacac tgccgtcgcc
     1201 tgggccacac ttttatcctt cggtcgagac gaatatgttc gaagatgtgc tcaaattgtg
     1261 aagcatacac gaatgctggc cgagaaaatt gagaaaatca aatggatcaa gccttatgga
     1321 aaatcggatg tttcattggt ggcgttctcc ggaaatggtg tgaatatcta cgaagtttct
     1381 gacaaaatga tgaagctcgg atggaatttg aacactctgc agaatccagc ggcaatccac
     1441 atttgtttga caatcaatca agcgaacgag gaagttgtga atgcgttcgc cgtcgacctt
     1501 gagaagattt gtgaagaact cgctgcaaaa ggtgaacaaa aagctgacag tggaatggct
     1561 gcgatgtatg gaatggctgc gcaagtacca aaatcagtag tggacgaggt tatcgctctg
     1621 tacattgacg caacttattc agctccacct tcaacttcta attaattact ttttccattg
     1681 aattttctct atttgcacca atatatctgt gatttttttt gtagtaaata aatatatact
     1741 attctgtgat ttttttctgt agtaaataaa tatatatacc aattataacg aattaatt
//