Dbfetch
LOCUS NM_066418 1972 bp mRNA linear INV 22-NOV-2023
DEFINITION Caenorhabditis elegans C-type lectin domain-containing protein 160
(clec-160), partial mRNA.
ACCESSION NM_066418
VERSION NM_066418.8
DBLINK BioProject: PRJNA158
KEYWORDS RefSeq.
SOURCE Caenorhabditis elegans
ORGANISM Caenorhabditis elegans
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
Caenorhabditis.
REFERENCE 1 (bases 1 to 1972)
AUTHORS Sulson,J.E. and Waterston,R.
CONSRTM Caenorhabditis elegans Sequencing Consortium
TITLE Genome sequence of the nematode C. elegans: a platform for
investigating biology
JOURNAL Science 282 (5396), 2012-2018 (1998)
PUBMED 9851916
REMARK Erratum:[Science 1999 Jan 1;283(5398):35]
REFERENCE 2 (bases 1 to 1972)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1972)
AUTHORS WormBase.
CONSRTM WormBase Consortium
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics
Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org
REFERENCE 4 (bases 1 to 1972)
AUTHORS Sulson,J.E. and Waterston,R.
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger
Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute
at Washington University, St. Louis, MO 63110, USA
COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This
record is derived from an annotated genomic sequence (NC_003281).
On Feb 2, 2021 this sequence version replaced NM_066418.7.
COMPLETENESS: incomplete on the 5' end.
FEATURES Location/Qualifiers
source 1..1972
/organism="Caenorhabditis elegans"
/mol_type="mRNA"
/strain="Bristol N2"
/db_xref="taxon:6239"
/chromosome="III"
gene <1..1972
/gene="clec-160"
/locus_tag="CELE_F09G8.8"
/db_xref="GeneID:176167"
/db_xref="WormBase:WBGene00017322"
CDS 1..1920
/gene="clec-160"
/locus_tag="CELE_F09G8.8"
/standard_name="F09G8.8"
/note="Confirmed by transcript evidence"
/codon_start=1
/product="C-type lectin domain-containing protein 160"
/protein_id="NP_498819.2"
/db_xref="EnsemblGenomes-Gn:WBGene00017322"
/db_xref="EnsemblGenomes-Tr:F09G8.8"
/db_xref="GeneID:176167"
/db_xref="WormBase:WBGene00017322"
/translation="MDLKSWILLSCTLLPLSVTSYECYVTPCTRDIIIVVDGSSSMQT
STYVSQEINMITKLTYSWTLDDAKVRLALVGAYLGNEFNGLDYFTDSSLIEKRLQSFR
LAAMQYGLFSGDFNTTVRFLDERYVGPRATFGPRANVQKRIIIFSAHKGASDIASTKS
KLQEFAQLGYAVTIVGIGVSEDVYKGTFYHKFVSVQWFELGVVAQSIIDTITEDGICF
LDQGWTTPKQEICTTSTTTTRAPTTTTTVTTVKGVTGKPATTAKPVPPTHPPFPVGDY
QDCSCTTQSLYIDIIFVIDVSEGMGQGGLMMVKAEINTLVGQMSLDPNIQKHVQVGLI
KYSDKAEVVFKPSDYTNEDEFTEDLWSDPRLEDVDEKSDEVNLHLGLQQAAKMTASMR
NGVRKVIVVYAASYNDEGNDDARQIAANIRETGYAIITVAFVEPESSNLVMKIGEIAS
PRMNFTSFRDDLLVEQMEDALCQVNCYCPNGWKQLVLENRKYGECFFPTKIDASWTAS
KFECPVLSKEHTGNGHLVYVNSELKNTFLNQFYMDNWYPENQENPNYDIGYYYDQATK
KFIWVNGVTNNPYSNWATGHPDVKQGDCVMAKLLKDSKNDFRWNSVSCTSEYGRGLCQ
EAACDTDFYCAPSSN"
ORIGIN
1 atggatttaa aaagttggat tctactttca tgcactttgc tcccattatc tgtcacatct
61 tacgaatgct acgtaacacc ttgcacacgt gatatcatca ttgttgttga tggatctagt
121 tccatgcaga caagcacata tgtttcacaa gaaataaata tgatcaccaa gttaacttat
181 tcgtggactt tggatgatgc aaaagtacga ttggctctgg ttggagccta tttgggaaat
241 gagtttaatg gtttggacta tttcacagat agctctctaa tcgaaaaacg tcttcaatca
301 ttccgattgg cagcaatgca gtatggacta tttagtggtg attttaatac aaccgtccga
361 tttctagacg agcgttatgt tggcccaaga gccacttttg gaccacgagc aaatgttcaa
421 aaacgaataa taatcttttc ggctcataaa ggagcaagtg atattgcatc aacaaagagt
481 aaactacaag agtttgcaca acttggatat gccgttacta ttgttggaat tggagttagt
541 gaggatgttt ataagggtac tttttatcac aagtttgtgt ccgttcaatg gtttgagtta
601 ggagttgttg cacaatcaat tatcgataca attacagagg atgggatttg tttcttagat
661 caaggttgga cgactccaaa gcaggaaata tgcaccacga gcaccacaac aacacgtgct
721 ccaactacaa ctacaacagt aacaactgta aaaggtgtaa ctggaaaacc tgcaacaaca
781 gctaagccag ttccacctac acatccgcca ttcccagtcg gagattatca agactgtagt
841 tgtactacac aaagtctata tattgatata atatttgtga tcgacgtatc agagggaatg
901 ggacaaggtg gacttatgat ggtgaaggcc gagataaata ctttagttgg tcaaatgtca
961 ctggatccaa atattcagaa acatgttcaa gttggactta tcaaatacag tgacaaggca
1021 gaggttgttt ttaaaccatc tgattataca aatgaggatg agttcactga agatttgtgg
1081 tcagatccac gtcttgaaga tgttgatgaa aaatctgacg aggttaatct gcacttgggg
1141 cttcaacagg ctgcaaaaat gaccgcttca atgaggaatg gtgtgaggaa ggttattgtc
1201 gtatatgctg caagttacaa tgacgaagga aacgacgatg cccgccaaat cgctgcaaac
1261 atcagagaga caggttatgc aatcatcaca gtggcatttg tggaaccaga atcttcaaat
1321 ttggttatga aaattggaga aatcgcaagc ccaagaatga acttcacatc ttttcgagat
1381 gacttgttgg ttgaacaaat ggaggatgct ttgtgtcagg tcaactgcta ttgcccaaat
1441 ggatggaaac agttggtatt ggaaaaccga aagtacggag aatgtttctt cccaacgaag
1501 attgatgcca gttggacagc atctaaattc gaatgtccgg tactttcaaa agaacacact
1561 ggaaatggac atttagttta tgtaaattcc gagctcaaaa acacattcct caatcaattc
1621 tacatggata actggtaccc tgaaaatcaa gaaaatccaa actatgacat tggatattac
1681 tatgatcaag ctacgaaaaa gtttatttgg gtgaatggag tgacaaataa tccatattca
1741 aattgggcta ctggacatcc agatgtaaaa caaggagatt gcgtgatggc gaaattattg
1801 aaagactcga aaaatgattt cagatggaac tctgttagtt gtacaagtga atatggaaga
1861 gggctgtgtc aagaagcagc atgtgacacc gatttctact gtgcaccttc aagcaattag
1921 tgatgtcatt ctcaatttga atttaaacag aataaactat ttttaaaagt aa
//