Dbfetch
LOCUS NM_065060 1222 bp mRNA linear INV 22-NOV-2023
DEFINITION Caenorhabditis elegans Platelet-derived growth factor (PDGF) family
profile domain-containing protein (pvf-1), mRNA.
ACCESSION NM_065060
VERSION NM_065060.4
DBLINK BioProject: PRJNA158
KEYWORDS RefSeq.
SOURCE Caenorhabditis elegans
ORGANISM Caenorhabditis elegans
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
Caenorhabditis.
REFERENCE 1 (bases 1 to 1222)
AUTHORS Sulson,J.E. and Waterston,R.
CONSRTM Caenorhabditis elegans Sequencing Consortium
TITLE Genome sequence of the nematode C. elegans: a platform for
investigating biology
JOURNAL Science 282 (5396), 2012-2018 (1998)
PUBMED 9851916
REMARK Erratum:[Science 1999 Jan 1;283(5398):35]
REFERENCE 2 (bases 1 to 1222)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1222)
AUTHORS WormBase.
CONSRTM WormBase Consortium
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics
Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org
REFERENCE 4 (bases 1 to 1222)
AUTHORS Sulson,J.E. and Waterston,R.
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger
Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute
at Washington University, St. Louis, MO 63110, USA
COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This
record is derived from an annotated genomic sequence (NC_003281).
On Sep 4, 2019 this sequence version replaced NM_065060.3.
FEATURES Location/Qualifiers
source 1..1222
/organism="Caenorhabditis elegans"
/mol_type="mRNA"
/strain="Bristol N2"
/db_xref="taxon:6239"
/chromosome="III"
gene 1..1222
/gene="pvf-1"
/locus_tag="CELE_Y39A3CL.6"
/db_xref="GeneID:175327"
/db_xref="WormBase:WBGene00004249"
CDS 257..1171
/gene="pvf-1"
/locus_tag="CELE_Y39A3CL.6"
/standard_name="Y39A3CL.6"
/note="Confirmed by transcript evidence"
/codon_start=1
/product="Platelet-derived growth factor (PDGF) family
profile domain-containing protein"
/protein_id="NP_497461.1"
/db_xref="EnsemblGenomes-Gn:WBGene00004249"
/db_xref="EnsemblGenomes-Tr:Y39A3CL.6"
/db_xref="GeneID:175327"
/db_xref="GOA:Q9N413"
/db_xref="InterPro:IPR000072"
/db_xref="InterPro:IPR029034"
/db_xref="UniProtKB/TrEMBL:Q9N413"
/db_xref="WormBase:WBGene00004249"
/translation="MQNPMILLIFCLFCAVICSRGTDSDIPHEFHKMLKHAKSLNSLL
RDLHVIYSPEMTNRHVEKTDKHGAALSLKSGSMSAQRIVSIQNISDDEMDGYTLFHLQ
SMKDIKQGNDTCNLQSVCVPIPQLSDDPQVLMYPKCYEVKQCVGSCCNSVETCHPGTI
NLVKKHVAELLYIGNGRFMFNMTKEITMEEHTSCSCFDCGSNTPQCAPGFVVGRSCTC
ECANKEERNNCVGNATWNAETCKCECDLKCEEGKILHKDRCDCVRRRQHHGGPRGHHG
HRHHHRSRPIDTEEVQKIGQLKVGRIGG"
ORIGIN
1 cattttggcg ggcggcaatt caaaattcaa ttttatgaaa acatgtactt ttaccaatta
61 gtttccaatt taaaaccaat tttaaaaaat taccaattct ttgcgagaag cttcccattc
121 ccatgactca tggatcacaa gatatcagct caccggagcc cagttgtctc tccaaatcaa
181 ttaaaccagc tgacaagagc ctgaagcaag cactctctac taaacatctc tatcaattaa
241 aatctctctc gaaaccatgc aaaatcccat gattttattg attttttgcc ttttctgtgc
301 agtgatctgc tcccggggta cagattcgga tattccacat gaattccaca aaatgctgaa
361 gcacgccaag agtttgaata gtctactgcg ggatttacac gtgatttaca gtcccgaaat
421 gacaaatcga cacgttgaaa agaccgataa gcatggagcc gccctctccc taaaaagtgg
481 ctcaatgtcg gcgcaacgca tagtttccat tcaaaatatt agcgatgacg aaatggacgg
541 ctacacactg tttcatttac aaagtatgaa ggatattaaa cagggaaatg atacttgtaa
601 tctccaatca gtctgtgttc cgattccaca actgtccgac gatccacagg tgttaatgta
661 cccaaaatgc tatgaggtga aacagtgcgt aggaagctgc tgtaactctg tggagacctg
721 tcatcccgga acaattaatt tggtgaagaa acacgtcgcc gagctacttt acatcggaaa
781 cgggagattc atgttcaata tgacaaagga aatcacaatg gaggagcata cctcgtgttc
841 gtgctttgat tgcggttcta atactccaca atgtgcaccg ggcttcgtgg ttggtagatc
901 atgcacctgt gagtgcgcga acaaagagga acgcaataat tgtgtaggca acgccacgtg
961 gaacgcggag acttgcaaat gtgaatgtga cctgaaatgt gaagagggga aaattttaca
1021 caaggatcgg tgtgattgcg tgagacgcag acaacatcat gggggaccga ggggacatca
1081 tgggcaccgt catcatcacc gttcgagacc tattgatacg gaagaggtac agaagatcgg
1141 gcagttgaag gttggaagga tcggtggatg aaaaaataca ctaatattga tttttttgag
1201 ttttaataaa caattattga gt
//