Dbfetch

LOCUS       NM_064287               1424 bp    mRNA    linear   INV 22-NOV-2023
DEFINITION  Caenorhabditis elegans C-type LECtin (clec-4), mRNA.
ACCESSION   NM_064287
VERSION     NM_064287.4
DBLINK      BioProject: PRJNA158
KEYWORDS    RefSeq.
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 1424)
  AUTHORS   Sulson,J.E. and Waterston,R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282 (5396), 2012-2018 (1998)
   PUBMED   9851916
  REMARK    Erratum:[Science 1999 Jan 1;283(5398):35]
REFERENCE   2  (bases 1 to 1424)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1424)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  TITLE     Direct Submission
  JOURNAL   Submitted (29-OCT-2023) WormBase Group, European Bioinformatics
            Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org
REFERENCE   4  (bases 1 to 1424)
  AUTHORS   Sulson,J.E. and Waterston,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger
            Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute
            at Washington University, St. Louis, MO 63110, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by WormBase. This
            record is derived from an annotated genomic sequence (NC_003280).
            
            On Sep 4, 2019 this sequence version replaced NM_064287.3.
FEATURES             Location/Qualifiers
     source          1..1424
                     /organism="Caenorhabditis elegans"
                     /mol_type="mRNA"
                     /strain="Bristol N2"
                     /db_xref="taxon:6239"
                     /chromosome="II"
     gene            1..1424
                     /gene="clec-4"
                     /locus_tag="CELE_Y38E10A.5"
                     /db_xref="GeneID:189654"
                     /db_xref="WormBase:WBGene00012583"
     CDS             60..1337
                     /gene="clec-4"
                     /locus_tag="CELE_Y38E10A.5"
                     /standard_name="Y38E10A.5"
                     /note="Confirmed by transcript evidence"
                     /codon_start=1
                     /product="C-type LECtin"
                     /protein_id="NP_496688.1"
                     /db_xref="EnsemblGenomes-Gn:WBGene00012583"
                     /db_xref="EnsemblGenomes-Tr:Y38E10A.5"
                     /db_xref="GeneID:189654"
                     /db_xref="GOA:Q9NAK5"
                     /db_xref="InterPro:IPR000859"
                     /db_xref="InterPro:IPR001304"
                     /db_xref="InterPro:IPR016186"
                     /db_xref="InterPro:IPR016187"
                     /db_xref="InterPro:IPR018378"
                     /db_xref="InterPro:IPR035914"
                     /db_xref="UniProtKB/TrEMBL:Q9NAK5"
                     /db_xref="WormBase:WBGene00012583"
                     /translation="MQFYSVLLLVSLLLLLTISEASYPPVCTSGFTLINGKCLRIFVD
                     VSTHTAAEKTCKGYGATLVTVKNSIDNRAIADFTGNNANLFWMGLYCFDSDVSKCLWD
                     DATGSAEVYDNFAAGFPHIALGNCVYYSVQGALAGMWLSSDCNDRRSFICELPASHAD
                     PCPYNYNGFCYTFHNTASTYTKGQKICEQECGNLASIHSANENRYIMTFGGRATKEDL
                     LLGGMWPADDVYNWVDGSLWEYENFDPINVRDSVCVIMSNGDSRPIALGMWYSGECKN
                     EYSVVCKRPAGIQCPPNPTIVPVTPMPAVQSFCNSSVMAPSEITSPHFPYNYYNSDFC
                     SYQISTLGSYNVLLRFSTFDTEKVNDVVTVYDGDSTNDPVIGVYAGSFYPFTVISTGN
                     KMLVTFKTDKSNTRQGFSGRITSYSTTESGERD"
ORIGIN      
        1 agacgccgag agctgcttaa atagcaaagt cgcagttttc tccttatagt catttgatta
       61 tgcaatttta ttccgtccta cttctcgttt cccttctatt actgctcaca atcagtgaag
      121 catcttatcc accagtctgc actagtggat tcacattgat caatgggaaa tgtctgagga
      181 tatttgtgga tgtttcgacg catactgcgg ctgagaaaac ctgcaaggga tatggagcga
      241 cactggtgac tgtgaagaat tctattgaca accgagccat cgcggatttc accggaaaca
      301 acgccaacct attctggatg ggactttact gtttcgatag tgacgtttca aagtgcttat
      361 gggatgatgc tactggatcc gctgaggtct atgacaattt tgcggctgga ttcccccaca
      421 tcgccctcgg aaactgcgtt tactactctg tgcaaggcgc cttggcaggc atgtggctga
      481 gcagtgactg caacgatcgc cgatctttca tttgtgaact accggcttct catgcagacc
      541 catgcccata caattacaat ggcttctgct acactttcca caataccgcc tcaacttata
      601 ccaagggcca gaagatttgc gagcaagagt gtggaaactt ggcctcaatt cactctgcta
      661 atgaaaaccg gtacattatg acatttggcg gacgtgctac taaagaagat ctcctactcg
      721 gaggcatgtg gccagctgac gacgtataca attgggtgga tggttcactg tgggagtacg
      781 aaaatttcga tccaataaac gtcagagatt cagtttgcgt cataatgtca aatggtgact
      841 cgagacctat cgcccttgga atgtggtaca gtggagaatg caaaaacgag tatagtgtcg
      901 tctgcaagag acctgccgga atccaatgtc ctccaaaccc aaccatcgtc cccgtgacac
      961 caatgccagc agtccaatcg ttctgcaatt ctagcgttat ggctccaagt gaaatcacat
     1021 caccccactt cccatataac tactataact ctgacttctg cagctatcaa atatccacac
     1081 taggatctta caatgtgctc ctcagatttt caacatttga cactgaaaag gtcaacgatg
     1141 ttgtgacggt ttacgatgga gattccacga atgatcctgt gatcggagtc tatgctggat
     1201 ctttctaccc gttcacagtg atatccaccg ggaacaagat gcttgtcact tttaagacag
     1261 acaaatcaaa tacaagacaa gggttcagcg gacgaattac ttcctattcg acaacagaaa
     1321 gtggagaacg cgattaattt tttgatatat atatagatag catattgtta atttggatat
     1381 aaaaactaat gtatttatat taatgaaaaa cttgttgaag ttaa
//