Dbfetch
LOCUS NM_060032 1515 bp mRNA linear INV 22-NOV-2023
DEFINITION Caenorhabditis elegans Homogentisate 1,2-dioxygenase (hgo-1), mRNA.
ACCESSION NM_060032
VERSION NM_060032.7
DBLINK BioProject: PRJNA158
KEYWORDS RefSeq.
SOURCE Caenorhabditis elegans
ORGANISM Caenorhabditis elegans
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
Caenorhabditis.
REFERENCE 1 (bases 1 to 1515)
AUTHORS Sulson,J.E. and Waterston,R.
CONSRTM Caenorhabditis elegans Sequencing Consortium
TITLE Genome sequence of the nematode C. elegans: a platform for
investigating biology
JOURNAL Science 282 (5396), 2012-2018 (1998)
PUBMED 9851916
REMARK Erratum:[Science 1999 Jan 1;283(5398):35]
REFERENCE 2 (bases 1 to 1515)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1515)
AUTHORS WormBase.
CONSRTM WormBase Consortium
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics
Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org
REFERENCE 4 (bases 1 to 1515)
AUTHORS Sulson,J.E. and Waterston,R.
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger
Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute
at Washington University, St. Louis, MO 63110, USA
COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This
record is derived from an annotated genomic sequence (NC_003279).
On Sep 4, 2019 this sequence version replaced NM_060032.6.
FEATURES Location/Qualifiers
source 1..1515
/organism="Caenorhabditis elegans"
/mol_type="mRNA"
/strain="Bristol N2"
/db_xref="taxon:6239"
/chromosome="I"
gene 1..1515
/gene="hgo-1"
/locus_tag="CELE_W06D4.1"
/db_xref="GeneID:172726"
/db_xref="WormBase:WBGene00001843"
CDS 123..1436
/gene="hgo-1"
/locus_tag="CELE_W06D4.1"
/standard_name="W06D4.1"
/note="Confirmed by transcript evidence"
/codon_start=1
/product="Homogentisate 1,2-dioxygenase"
/protein_id="NP_492433.1"
/db_xref="EnsemblGenomes-Tr:W06D4.1"
/db_xref="GeneID:172726"
/db_xref="WormBase:WBGene00001843"
/translation="MSEFDELKYLTGFGNEHATSDPRVPDALPVGQNSPQKCSHGLYA
EQLSGTAFTAPRSQNQRSWLYRIRPSVIHRPFEAMKENDQHWTNNFSSIPPNPNQYRW
NPFPLPTKEGVTFVDNLYTVCGGGDVISRTGLAIHQFSCNASMEHTAMYNSDGDFLIV
PQQGALEITTEFGRLLVNPQEIAVIPQGIRFSVAVRGPSRGYILEVYGTHFQLPDLGP
IGANGLANPRDFEAPVAWFEDLDVEFTIINKYQGSWFQAKQGHSPFDVVGWHGNYVPY
KYDLKKFMVINTVSFDHCDPSIFTVLTAPSVKHGTAIADFVIFPPRWGCADNTFRPPY
YHRNCMSEYMGLITGCYEAKEGGFKPGGGSLHSMMTPHGPDFNCFEMASNADLKPQRV
AEGTMSFMFESSLNMAITNWAVYQNVDKDYYKDWQPLKKHFTMPK"
ORIGIN
1 aattgtgaga catagacatt tagataaggt tttgcacgaa acacctacaa acaaccgtat
61 taggtattct gttcctgtcc gattgactac tttttctgta aggcagaatt tcgaaactag
121 aaatgtcgga attcgatgag ttaaaatacc ttactgggtt cggcaacgaa catgctactt
181 cggatccaag agtacctgat gcattgcctg ttggacaaaa ctcaccgcag aagtgttccc
241 atgggcttta tgcggaacag ctcagtggaa ctgctttcac agctccccga tcacaaaatc
301 aacgttcgtg gctctaccgt attcgtccat cggtaattca ccgaccattc gaggcaatga
361 aagagaatga ccaacattgg accaacaact tttcttcaat ccctccaaat ccaaatcaat
421 atcgctggaa tcctttccca cttccaacaa aagaaggtgt tacttttgtg gataatctct
481 acactgtttg cggtggtgga gatgttatta gtcgcactgg attggcaatt catcaattct
541 cgtgcaacgc cagtatggag catacggcaa tgtataattc tgatggagat ttcttgattg
601 ttccacaaca aggtgccttg gaaatcacca cagagtttgg acgtctgctc gttaatccac
661 aagagattgc tgtgattccc caaggtattc gcttctccgt ggctgttcgt ggaccatctc
721 gtggatacat tttagaagta tacggaactc acttccaact tcctgatctt ggaccaattg
781 gagcaaatgg tcttgccaat ccaagagact ttgaggctcc agtcgcatgg tttgaagatc
841 tcgatgttga atttaccatt atcaacaagt atcaaggatc ctggttccag gccaaacaag
901 gtcattctcc atttgatgtt gttggttggc atggaaacta tgttccatac aagtatgact
961 tgaaaaagtt tatggttatc aatacagttt cattcgatca ttgtgatcca tcgattttta
1021 ctgttctcac agctccatct gtcaagcatg gtaccgctat tgctgatttt gtgatttttc
1081 caccaagatg gggttgtgcc gataacactt tcaggccacc atattatcac agaaactgta
1141 tgtctgagta tatgggatta atcactggat gctatgaagc aaaagaagga ggattcaagc
1201 caggtggtgg ttcccttcat tcaatgatga ctccacatgg acctgatttt aattgttttg
1261 aaatggcatc aaatgctgac cttaaaccac aaagagttgc tgaaggaact atgtctttca
1321 tgtttgaaag ttctttgaac atggccataa ccaactgggc agtttaccaa aatgtggata
1381 aagactacta caaggattgg caaccactca agaaacattt cacaatgcct aaataattcc
1441 aaaatatttg attttgctta tgagattttc gcacagtttt gattttcaaa tttctataaa
1501 aatgtttgct cttcg
//