Dbfetch
LOCUS NM_001332623 2372 bp mRNA linear PLN 20-OCT-2022 DEFINITION Arabidopsis thaliana NHL domain-containing protein (AT1G23880), mRNA. ACCESSION NM_001332623 VERSION NM_001332623.1 DBLINK BioProject: PRJNA116 BioSample: SAMN03081427 KEYWORDS RefSeq. SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 2372) AUTHORS Theologis,A., Ecker,J.R., Palm,C.J., Federspiel,N.A., Kaul,S., White,O., Alonso,J., Altafi,H., Araujo,R., Bowman,C.L., Brooks,S.Y., Buehler,E., Chan,A., Chao,Q., Chen,H., Cheuk,R.F., Chin,C.W., Chung,M.K., Conn,L., Conway,A.B., Conway,A.R., Creasy,T.H., Dewar,K., Dunn,P., Etgu,P., Feldblyum,T.V., Feng,J., Fong,B., Fujii,C.Y., Gill,J.E., Goldsmith,A.D., Haas,B., Hansen,N.F., Hughes,B., Huizar,L., Hunter,J.L., Jenkins,J., Johnson-Hopson,C., Khan,S., Khaykin,E., Kim,C.J., Koo,H.L., Kremenetskaia,I., Kurtz,D.B., Kwan,A., Lam,B., Langin-Hooper,S., Lee,A., Lee,J.M., Lenz,C.A., Li,J.H., Li,Y., Lin,X., Liu,S.X., Liu,Z.A., Luros,J.S., Maiti,R., Marziali,A., Militscher,J., Miranda,M., Nguyen,M., Nierman,W.C., Osborne,B.I., Pai,G., Peterson,J., Pham,P.K., Rizzo,M., Rooney,T., Rowley,D., Sakano,H., Salzberg,S.L., Schwartz,J.R., Shinn,P., Southwick,A.M., Sun,H., Tallon,L.J., Tambunga,G., Toriumi,M.J., Town,C.D., Utterback,T., Van Aken,S., Vaysberg,M., Vysotskaia,V.S., Walker,M., Wu,D., Yu,G., Fraser,C.M., Venter,J.C. and Davis,R.W. TITLE Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana JOURNAL Nature 408 (6814), 816-820 (2000) PUBMED 11130712 REFERENCE 2 (bases 1 to 2372) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 2372) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (18-JUL-2017) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter REFERENCE 4 (bases 1 to 2372) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter REFERENCE 5 (bases 1 to 2372) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003070). FEATURES Location/Qualifiers source 1..2372 /organism="Arabidopsis thaliana" /mol_type="mRNA" /db_xref="taxon:3702" /chromosome="1" /ecotype="Columbia" gene 1..2372 /locus_tag="AT1G23880" /gene_synonym="T23E23.5; T23E23_5" /db_xref="Araport:AT1G23880" /db_xref="GeneID:838999" /db_xref="TAIR:AT1G23880" CDS 935..2200 /locus_tag="AT1G23880" /gene_synonym="T23E23.5; T23E23_5" /codon_start=1 /product="NHL domain-containing protein" /protein_id="NP_001321768.1" /db_xref="Araport:AT1G23880" /db_xref="GeneID:838999" /db_xref="TAIR:AT1G23880" /translation="MVKFENGYSVETVLDGSKLGIEPYSIQVLSNGELLILDSQNSNI YQISSSLSLYSRPRLVTGSPEGYPGHVDGRLRDARLNNPKGLTVDDRGNIYVADTVNN AIRKISEAGVTTIAGGKMVRGGGHVDGPSEDAKFSNDFDVVYLGSSCSLLVIDRGNQA IREIQLHFDDCADQYGSGFPLGIAVLVAAVFFGYMLALLQRRLSSIVSYHTDQEVFEA VPDQDPIKPVRPPLILTGDEQEKQEESFLGTLQIFISNAWVFSVELFSGMFPGLRKKQ TVGLNFNHQETKHSAFSTTSWPIQESFVIHNKDEPPPVESRNATPGKIYPFMSKDATE KMQQLRQSRALYRSLDAEFLQEQQQEKHQQYHHRHHSTIPYTLYEQSSEKTNEIVFGP GQEQDQMNTHQNIHHRAHQFVSYPYGYYS" ORIGIN 1 atctctctca ctgttgtttt cttgtttctt tagaatcgca gttttttgct ctctttgtat 61 agaaagtctc tggtggtttg taatttacac ggagtaaccg aatggataaa agtgggtttt 121 gtaattcttt aagtacaagc cactaatttt tgtgagcact aagcaagact aatctaagat 181 tagtaatctt aatgtagtct tttgtgttct tcaaaaacgg tgtcgtttaa gtggttttct 241 tttacatttt ccatacttgg taaatttatc ttttgatttt ctctcgagta aaaattatat 301 aactcagact gtttgacaca catataaaat cttcttgcag agattgttac atattccagt 361 aacaattaca tgtgtaaata ttttgaagat tattccctga ataaaatctt aaattaatca 421 ccaaaaacct taatattttt ttttaattgt tgcgccgacg tttatggcat gaccaatgtg 481 tcacttttct acgcctctct ttctatttta ttttgttgct ttctcttctt cttcaacctt 541 tctccttcct ttttttttct cagattgtca cgaagtgtca ctacttcgtt caacatttta 601 aacattcatc tttctcattt cgctattcgt ctctcctcaa ctttagtaat gagtaggcat 661 tttctgtttc tgggtattat cattcttctc ttctctgcgt ttgttgcttc agctccttca 721 tcaacttcac ctgcgaagat tgttaatagt ttcatctcaa atcatggcac ttccttattg 781 aaatggttat ggtctctctc tttcaaaacc accactaaaa caggttcctt tgataatttt 841 tcctctcttc acggatttag ggttgtaaca gtttgattct gggtttttga tttccttttc 901 tgtttgatgc taatcagctg ttcctacgaa atcgatggtg aaattcgaaa atgggtattc 961 agtggaaacg gtgttagacg gaagcaaact cggtatcgaa ccttattcta ttcaggtctt 1021 atccaatggc gaattgctta ttctggattc tcagaatagt aacatttacc agatttcatc 1081 ttctctttcc ctttatagca gacccaggct agttactggc tcccctgaag gatatccggg 1141 tcatgtggac ggtagattaa gggacgcgag gttgaacaat cctaagggac tcacagttga 1201 tgatagagga aatatctatg ttgcagatac tgtgaataat gctatcagga agatcagtga 1261 agcaggagtc acaaccattg ctggggggaa aatggttcgt gggggaggtc atgtggatgg 1321 tccaagtgaa gatgcaaagt tttcaaatga ttttgatgtt gtttatctcg ggagcagttg 1381 ttccttgcta gtcattgacc gaggaaacca agccatcaga gagattcaac tccattttga 1441 cgactgtgct gatcagtatg gaagtggctt tcctctgggg attgcagttc ttgtagcggc 1501 agttttcttt ggctatatgc tggccttgtt gcaacgtaga ctcagttcta tcgtttcata 1561 tcatactgat caagaagtgt ttgaagctgt gcctgatcaa gatcctataa aaccggtcag 1621 accaccgcta attctaactg gagacgagca agaaaaacaa gaagaaagct tccttggaac 1681 gttgcagata ttcatttcaa atgcttgggt gttttctgtg gagctgttca gtggaatgtt 1741 tcccggtctc agaaagaagc agacagtcgg cttgaacttc aaccatcaag aaacaaagca 1801 ttctgctttt agcacaactt catggccaat tcaagaaagc tttgtaatac acaacaaaga 1861 tgaaccacct cccgtcgagt ccaggaacgc cactcctgga aaaatttatc ctttcatgtc 1921 caaagatgca acagagaaaa tgcaacagct gcgccaaagc cgtgccttgt acagaagctt 1981 ggacgccgaa ttcctccagg agcagcaaca agagaagcat cagcagtatc accataggca 2041 tcactcaaca atcccataca ctctttatga gcagagcagc gagaagacta atgagattgt 2101 gtttgggcca ggccaggagc aagaccagat gaatactcat cagaatatcc accacagagc 2161 tcaccaattt gtgagttacc catatggata ctattcatag acatgagaag ttgcttaata 2221 tgatagtagt agtagagatt gggaattcag gtatagtttt ttaaaatttg ttgagaaggc 2281 acaataggga tttgggtatt tagatctctc ttgtaagaaa agtaccaaag attaatcatt 2341 cttccttgat ataaagaaaa aaagatgagc ac // Unexpected Error when closing connection to refseq from NCBI E-utilities. Non-zero exit status returned (255). STDERR: "http status: 429 Too Many Requests at /nfs/public/rw/es/projects/jdbfetch/util/ncbi_refseq_fetch.pl line 124."