Dbfetch
LOCUS NM_001330804 2208 bp mRNA linear INV 22-NOV-2023 DEFINITION Caenorhabditis elegans ELM2 domain-containing protein (lin-40), partial mRNA. ACCESSION NM_001330804 VERSION NM_001330804.3 DBLINK BioProject: PRJNA158 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 2208) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 2208) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 2208) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 2208) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003283). On Apr 15, 2020 this sequence version replaced NM_001330804.2. COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..2208 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="V" gene <1..>2208 /gene="lin-40" /locus_tag="CELE_T27C4.4" /db_xref="GeneID:178788" /db_xref="WormBase:WBGene00003025" CDS 1..2208 /gene="lin-40" /locus_tag="CELE_T27C4.4" /standard_name="T27C4.4e" /note="Confirmed by transcript evidence" /codon_start=1 /product="ELM2 domain-containing protein" /protein_id="NP_001317834.1" /db_xref="GeneID:178788" /db_xref="GOA:A0A168H9W7" /db_xref="InterPro:IPR000679" /db_xref="InterPro:IPR000949" /db_xref="InterPro:IPR001005" /db_xref="InterPro:IPR001025" /db_xref="InterPro:IPR009057" /db_xref="InterPro:IPR017884" /db_xref="InterPro:IPR040138" /db_xref="UniProtKB/TrEMBL:A0A168H9W7" /db_xref="WormBase:WBGene00003025" /translation="MEEDEECPAPVGQGRTSSTEEPSASDAPAATAKDKKEEKEAKEN AKNLKETAEAEATKLIDWGDGGLPLGVDKLTPDQRLKLRQHEIFMTRQSEILPAAAIR GKCRVVLLGDGEEAQNYLPLDDTFYHSLVYDPNAQTLLADKGAIRVGEKYQAVVDEWM EPADREAKEAKVLAEKVKKEEEEAKLKAEAEEDTENDGLTIAEDEEMPELKNEEKEET KVEEEATTTDSEGEVGEVLVWHPHHALTDRDIDQYMIVARSVGLFARAIDGASAPKLP TLQLAAAFASRDVTIFHAHAILHQANYDVGQAVKYLVPVASRDTYPCQVDDSSGLQTK TLGGPILCRDQLEEWSTPEMNLFEDALDKVGKDFNEIRAEYLPWKSIRDIVEYYYLMK ASNRYTDRKKNKPSAGGGSSTTTDEKFTNIYIPPFNKPIAASILPYNTSQTTLMNNDN PCENCGTLDALNWYQWGGVGDKKVLCSTCWIQWKKFAGLNQKHELERFDKTRPPPVEP VAPTPAASNGTPASQKAAATAAVNTLTPQQQQQQRAAAANMLMTLNSGDKQNLLNVAK EALARGQITQEQFLQLQKNFAQKIQAQIQQQIQQQQQRQAQTTPQVVATPRKKTTPAT KPAIVFYTTICRRAVRRILPKSAFNLRKLSRRPNLAIDDEKILRAMIMLDKKHLLQSA QAAAGDKRSLIVESEFHKGITHLQHALTQAATGKRSAPQAVASGEPSAKMAKN" ORIGIN 1 atggaagagg acgaagaatg cccggccccg gttgggcagg gaagaaccag ctcgactgag 61 gagccatcgg cgtcggatgc tccagcagcg accgcaaagg acaaaaaaga agaaaaagaa 121 gccaaggaaa acgcgaaaaa cctcaaggag actgccgaag cagaagccac gaagctcatt 181 gactggggtg atggaggcct tccgctcgga gtcgacaagc tcaccccgga tcagaggctg 241 aagctccgac agcatgagat ctttatgacg aggcaatcgg agatccttcc agcagcggcg 301 attcgtggaa agtgtcgagt cgttcttctg ggagatggtg aagaggctca gaactacctg 361 cctctggatg ataccttcta tcattccctt gtctatgacc cgaatgcgca gactttgctg 421 gctgataagg gtgctattag ggttggcgag aagtatcagg cggtggtgga tgagtggatg 481 gagcccgccg atcgggaggc gaaggaggcg aaggtgctgg ccgagaaggt taagaaggag 541 gaagaggagg caaagttgaa ggctgaagcc gaggaggaca ctgagaatga tgggttgacg 601 atcgccgagg atgaggagat gccggagctg aagaatgagg aaaaggaaga gaccaaggtg 661 gaagaggaag ctaccaccac cgattccgaa ggtgaagtag gtgaagtcct cgtctggcac 721 ccgcaccacg ctctcaccga ccgtgacatt gatcagtaca tgattgtggc ccgatcagtc 781 ggcctattcg cccgagccat cgatggagct tccgcgccga agcttccgac tcttcagcta 841 gccgccgcct tcgcctcccg tgacgtcacc atcttccacg cccacgcgat ccttcatcag 901 gccaactatg atgtcgggca ggctgtcaag tacctggtcc cagtggcctc tcgagacacg 961 tacccgtgcc aggtcgatga ttcaagcggc ctgcagacta agacccttgg cggaccgatt 1021 ttgtgtcggg atcagctgga agagtggtcg acgcccgaga tgaatctgtt cgaggatgcg 1081 ctggataagg tgggcaagga tttcaatgag atccgcgccg agtaccttcc gtggaagtcg 1141 attcgggaca ttgtcgagta ctattacctt atgaaggcct ccaatcgata cacagatcgc 1201 aagaagaaca agccatcggc gggtggtgga agctcgacga cgacggacga gaagttcacc 1261 aacatctaca ttccgccgtt caacaagccg atcgccgcct cgattcttcc gtacaacact 1321 agccagacga cgctgatgaa caacgacaat ccgtgtgaga attgcgggac gctggacgct 1381 ctcaactggt atcagtgggg aggtgtcggc gataagaagg ttctgtgctc gacgtgttgg 1441 attcagtgga agaagttcgc cgggctcaat cagaagcacg agctcgagcg gttcgacaag 1501 acgcggccgc caccggtgga gccggtagcg ccgacgccag cggcctcaaa tggaactcca 1561 gcttctcaga aggcggctgc cacggcggcg gtgaacacgt tgactccaca acaacagcag 1621 cagcagcgcg ctgccgccgc caacatgctc atgacgctga acagtggtga taagcagaat 1681 ttgttgaatg tggcaaagga ggcgctggca cgtggccaaa tcacccagga gcaatttcta 1741 cagctacaga agaatttcgc tcagaaaatc caggcacaaa ttcaacaaca gattcagcag 1801 cagcaacagc ggcaggcgca aacgacgccg caagtggtcg caacgcccag gaaaaagacg 1861 actccagcca caaaaccggc catcgtcttt tacacgacaa tctgccgacg agcggttcgc 1921 cggattttgc cgaaaagcgc gttcaacctg agaaaattgt cccgtcggcc gaacctcgcc 1981 atcgatgatg agaagatcct cagagctatg attatgctcg acaagaagca ccttctgcag 2041 tcggcgcagg cagccgcagg cgataagaga agcctgattg tcgagtcgga attccataag 2101 ggaatcacac atttacaaca cgctctgact caagctgcaa ccggcaagcg aagcgccccg 2161 caggccgtgg catcaggcga gccgtccgcc aaaatggcaa agaactaa //