Dbfetch
LOCUS NM_001313487 5097 bp mRNA linear INV 22-NOV-2023 DEFINITION Caenorhabditis elegans Formin HOmology Domain (fhod-1), partial mRNA. ACCESSION NM_001313487 VERSION NM_001313487.3 DBLINK BioProject: PRJNA158 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 5097) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 5097) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 5097) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 5097) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003279). On Apr 15, 2020 this sequence version replaced NM_001313487.2. COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..5097 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="I" gene <1..>5097 /gene="fhod-1" /locus_tag="CELE_C46H11.11" /db_xref="GeneID:172133" /db_xref="WormBase:WBGene00016735" CDS 1..5097 /gene="fhod-1" /locus_tag="CELE_C46H11.11" /standard_name="C46H11.11e" /note="Product from WormBase gene class fhod; Confirmed by transcript evidence" /codon_start=1 /product="Formin HOmology Domain" /protein_id="NP_001300416.1" /db_xref="EnsemblGenomes-Gn:WBGene00016735" /db_xref="EnsemblGenomes-Tr:C46H11.11e" /db_xref="GeneID:172133" /db_xref="InterPro:IPR011989" /db_xref="InterPro:IPR014768" /db_xref="InterPro:IPR015425" /db_xref="InterPro:IPR016024" /db_xref="InterPro:IPR042201" /db_xref="UniProtKB/TrEMBL:A0A0K3AU72" /db_xref="WormBase:WBGene00016735" /translation="MRSHCSPATASYAPPVVKSRGLRTYDIDVGGSAPRASSLRATPI DLDFPVIQKSSIAFAKPTTISTLEPTSFAKPYIPSGYLSSSVKTANQEVFAKPYIPST SSECFAKPYSNLKSSEELTKPYEPSTVSAKPYISSSEASSTKPYSSSFFSKPKEPEVK VQPSSSMFSRKMFTPSTSSAPKPYEPSTSSTFQFPEIKPKWYTSPVAEPLIRPYNSKP IDTPVSYKPSTTKAYVSPFRESEVPPISSLSTHVSDESLARNASILSVSNELPLIVKP LRRNFSEQRRTTLVEPPAIPMPSESFCSSLPRNFHRPTVLHCAAPVVIGTDTSEAIPF IDEDPPPSSLPAVPSQSSYIAPPTIKPSVQSNSSLHRREDSGYRSMENIRKMSIPEAA QPVVAMITPYTSKEPTSSKVESQDSVEDFHEDPFDWGDEYLNSGAKRRCSLVLRTQTS LRVKTIIDKLLNCSGRDQRRALFSLKQIFQDDQDLVHEFVQNQGLDCMIRLGRTADQN HQNYILRALGQLMLYVDGMNGIIAHNGTIQWLYELLDSPLYIDEERKEMSPFRLEWFR LVVKTALKLLLVFIEYNDNNALLVLTAIQTVDKSKGQADWSGLMKVLTEKDSPDAETL VYGMTVVNKALHGIPDRDTYYDAVDTLDTLGMEDAIKSMSRSNNKELEEQCRLYEREL KEEDERGDNDEDVVKMRSSADTFKNQSRRSSQGSHDSAITMGSEEDGSRCSPDRDKQT PSPAPSSHIIPSSPLIPPTPSACNTLERRSRAFEHEMPEDRETALEKLNRSLHNRREM EKQKAEEARRKEAERIEEIERMRQQAEERRRREREEEERRKREEEEAEKQRKREEREV RFSKNDISPTTSSGVADDKKATMRRRHDEARRRQLEHEQFTANRTLFNKIDIGAAPRI PSPVSPTVSSWQPPVREDIQPTTSTATNNNDIGSIRSKNIPAPIQLVQENQENEIPKE TDESESSKSVKAPPPSFPTLFSPTESKTMDFSEVAPQEPEPEKVAPPPPRAKIEDTGS GNSFADMLQKRAARSAEANRGTFEKKESEAEMQWKKAAENLEKRPLIINDLDFSQFHG VEYQQDPLQLARMAKMKEMAENGMRGGPVGVGVPPPPPPPSAIPLPPRLQGGIPPPPP LGIIPPPPPPGNLLMNGINRGDISPAANKGVLKLHWKPATVEQPDGIPSLKQKGSFWN TVDGAVPTFDAKKIVQLFETKKEKEAPVKKVAETKTQTLSVLPLKRSQAINIGLTKLP PINVIPAAIMKFDSLVLNKDGIEKILKTMMPSPKEIEEIEIKAAENPEMTLGNAEQLL LKLSQIPCLLERLRLWLFTLDYKNSEKDIAEPLMDMQLAMKEMEESRTFKVAMGMLLA IGNSLSGTDIKGFYLDYLTKASEVKDPVYKHTLTYHLAEYMVEHFSEGTDLYSEFGAV ARSARVDYKELLDNLIRLEKDCKSSWECLATISKNDNSNMKQKINDYLADVAQRIHQL KAIYTVTKNRWHSFLLYFGYSVDEIPNQTPNDVFKMVTEFSLEYRTTRDKILQQRKRL AEKRERNKTRGKIWALEGSSAEGGAGDAAPLRRRNHGPGTVAPVQNSQQRHDDMSKML ASMADDNNSLRRRPAGSNGVNGRNFGGSVKDLVDTESPEDEILNGLVKAATLQTDPRD QRRRARQFNRKSLRRTRTLKMVDGQLETNY" ORIGIN 1 atgcggtcgc attgtagtcc ggcgaccgca tcttatgctc caccagttgt caaatctcga 61 ggactccgaa cttatgatat cgatgtagga ggttcagctc ctcgagcttc ttctcttcgt 121 gcaacaccaa ttgatctaga ttttcctgtg atacaaaaga gcagcatagc ctttgcaaag 181 ccaaccacaa tttctacact ggaacctaca tcttttgcaa aaccgtatat accgagtggt 241 tatttgagta gctcagtaaa aacggcaaat caagaagttt ttgcaaagcc ctacatacct 301 tcaacatctt cagaatgttt tgcaaagcca tatagtaatc taaaatcttc tgaagaattg 361 acgaaaccat atgaaccctc aacagtctct gcaaaaccat atatctcatc atcagaagct 421 tcttctacaa aaccatactc ttcaagtttc ttttctaagc caaaagagcc cgaagtgaag 481 gttcagcctt cgagtagtat gttttcaaga aaaatgttca caccttcgac atcaagtgca 541 ccaaaaccgt acgagccctc cacgtcttct acatttcaat ttccggaaat caaaccaaaa 601 tggtacactt caccagtggc ggaaccgtta ataaggccat acaattcaaa accaattgac 661 actccagtta gctataaacc atccacaaca aaagcgtacg ttagtccatt ccgtgagtcg 721 gaagtaccgc ccatttccag tctatcgacc catgtgtcgg atgaatcact ggccaggaat 781 gcgagtatac tatcggtttc caatgagctt ccactcatcg tcaaacctct tcgtcgtaac 841 ttttcggagc aaagacggac aacattagtg gagccacctg ctataccaat gccatcggag 901 tcattttgta gttctctacc aagaaacttt catcggccaa ctgtgctaca ctgtgcagct 961 ccagttgtca ttggaacgga tacatcggaa gcaattccat tcattgatga agatccacca 1021 ccatcatctc ttccagctgt accatctcaa tcttcatata ttgcacctcc aacaatcaaa 1081 ccatcagtcc aatcaaattc ttctctccat cgtagagaag acagtggcta tcgttcgatg 1141 gaaaatattc gaaaaatgag tattcctgaa gcagcacaac ctgtggttgc gatgataaca 1201 ccatacactt caaaagaacc aacttcctcg aaagttgaat cacaagattc agtagaagat 1261 tttcatgaag atccatttga ttggggagat gaatatttaa attctggggc aaaaagaaga 1321 tgcagcttgg tacttcgaac acaaacttca ttacgcgtca aaactataat tgataagctt 1381 ctgaattgtt ctggacgtga tcaacgacgc gcattattct ccctcaaaca gatattccag 1441 gatgaccaag atcttgttca cgagtttgtt caaaatcaag gtctcgattg catgattcga 1501 ttgggtcgaa ctgctgatca aaaccatcag aattatattc tacgagctct tggacaattg 1561 atgctctatg tggatggaat gaatggaata attgcacata atggaaccat tcagtggctc 1621 tacgagcttc tcgattcacc attgtacatc gatgaagagc gtaaagaaat gtcgccgttt 1681 cgtcttgaat ggttccgact tgttgtaaaa acagctctta aactacttct tgtgtttatc 1741 gaatacaatg acaacaatgc attactggtg ctcacagcca ttcaaaccgt tgacaagtcg 1801 aagggacaag ctgattggtc tggacttatg aaggtgctga ctgaaaaaga ctcaccagat 1861 gctgaaactc ttgtctacgg aatgacagtt gttaataagg ctctgcatgg gattccagac 1921 agagacacgt actacgacgc agtagataca ctagatacac tgggtatgga ggatgctata 1981 aaaagtatga gcagatcgaa caacaaggag ctcgaggagc aatgccggtt gtacgaaagg 2041 gaattgaaag aagaagatga acgaggggat aatgatgaag atgttgtcaa gatgagatct 2101 tccgctgaca cattcaagaa tcaatcccga cgatcgagtc aaggatctca tgattccgca 2161 atcacaatgg gaagtgaaga agatggatca agatgcagtc ctgataggga taaacagacg 2221 ccttctccag caccttcttc acatattata ccatcttctc cacttatccc tccaactcca 2281 agtgcatgta atacacttga gagaagatcc cgagcatttg aacatgaaat gccagaagat 2341 cgggaaacgg cgttggaaaa attgaatagg tcactccata atcggaggga aatggagaag 2401 cagaaagctg aagaagctag acgaaaagag gcagagagaa tcgaggaaat cgagagaatg 2461 aggcaacagg cagaagagag aagacgtaga gaaagagaag aggaagagag aagaaaaaga 2521 gaagaagagg aggcagagaa acagagaaaa cgagaggaac gagaagtcag attctcaaag 2581 aacgatattt ctccaacaac atcttctgga gtagcagatg acaagaaggc gacgatgagg 2641 cgacgacatg atgaagcacg ccgtcggcaa ttggaacatg aacaattcac agcgaatagg 2701 acgttgttta acaaaattga tattggagcc gctccacgaa ttccatcccc agtttcccca 2761 acagtttctt catggcaacc accagtcagg gaggatattc aaccgactac atctactgca 2821 actaataaca acgatatcgg gtctattcgc agcaaaaata ttccggcgcc gattcagttg 2881 gttcaggaaa atcaagagaa cgagattccg aaagaaaccg acgagagtga aagttcgaaa 2941 tcggtaaaag ctccacctcc atcatttcct actttattct cccctaccga atcaaaaaca 3001 atggacttct cagaagttgc acctcaagag cctgaaccag aaaaagtggc accaccgcct 3061 ccgagagcaa agattgaaga cactggaagt ggcaacagtt ttgctgatat gctccaaaaa 3121 cgagccgccc gttcagcaga ggcgaaccgt ggaacttttg aaaagaaaga atccgaagca 3181 gaaatgcaat ggaagaaagc ggcggaaaat cttgaaaaga gaccgctaat catcaatgat 3241 cttgattttt cgcaattcca cggagttgaa tatcaacagg atccattgca gttggcgaga 3301 atggcaaaaa tgaaggaaat ggcggagaat ggaatgcgtg gaggtcctgt tggtgttggt 3361 gttccaccac cacctccacc accatctgct attccattac caccaagatt gcaaggagga 3421 atcccaccac cacctccact tggcatcatt cctccacctc ctcctcctgg caatttgctt 3481 atgaacggta taaatcgagg agatatcagt ccagcagcca acaaaggagt tctgaaatta 3541 cattggaaac cagcgacagt tgaacaaccg gatggaattc catcattaaa acaaaaagga 3601 agcttctgga atacggtcga tggagctgtt ccaacatttg atgctaagaa gattgtacag 3661 ttgtttgaga cgaaaaagga gaaggaagca ccggtcaaga aagtagccga aactaaaact 3721 caaactctat ctgttcttcc tctgaaaaga tcgcaagcca tcaacattgg tctaactaaa 3781 ttgccaccga tcaacgtcat ccctgcagca attatgaaat ttgactcttt ggttttgaac 3841 aaggacggaa tcgaaaaaat tctgaaaaca atgatgccgt caccgaaaga aattgaagaa 3901 attgagatca aggcagcaga gaatccagag atgacgttgg gaaatgctga acaacttctt 3961 ttgaagcttt cacagattcc atgtcttctt gagagacttc gtctttggct attcaccttg 4021 gattataaaa actctgaaaa ggatattgct gagcccctta tggatatgca attggcaatg 4081 aaagaaatgg aagaatcacg aacattcaaa gttgcgatgg gaatgctttt ggccattgga 4141 aactctttat caggaactga tattaagggt ttctatctgg attatttaac aaaagcatca 4201 gaagtaaagg atccagtcta caagcatact ttgacatatc acttggctga atatatggtt 4261 gaacacttct cagagggtac tgatttgtac agtgaatttg gagcagttgc cagaagtgct 4321 cgagttgatt acaaagagct tcttgataat ttgattcgcc tcgagaaaga ctgcaagagc 4381 tcatgggaat gtttggcaac aatcagtaaa aatgataact caaatatgaa gcaaaaaatc 4441 aatgattatc tggcagatgt tgctcaacga attcatcagt taaaggcaat ctatacagtc 4501 acaaagaaca gatggcactc tttccttttg tattttggat attcagttga tgaaattcca 4561 aatcagacac caaatgacgt gttcaaaatg gtaaccgaat tctcgttgga ataccgtacc 4621 acacgagata agattctaca acaacgtaag cggttggcag agaagagaga acgcaataag 4681 acacgtggaa agatatgggc tcttgagggt agctcggcag agggtggagc cggagatgca 4741 gcacctctgc gacgaagaaa tcatggtcca ggaactgtag cgcctgttca aaactctcaa 4801 caaagacacg acgatatgtc gaaaatgttg gcttcaatgg cagatgacaa caattctttg 4861 agaagaagac cagctggatc caatggagtc aatgggcgca actttggtgg aagtgttaaa 4921 gacctggtgg acactgaatc tccagaagat gagattttga atggattggt taaagccgca 4981 acattgcaga ctgatccaag agatcaacga cgtagagcta gacagtttaa tcgaaaatct 5041 cttcgccgta cacgtaccct caaaatggtt gatggacagc tcgaaacaaa ctactag //