Dbfetch
LOCUS NM_001313361 3141 bp mRNA linear INV 22-NOV-2023
DEFINITION Caenorhabditis elegans Rho-GAP domain-containing protein (rga-4),
partial mRNA.
ACCESSION NM_001313361
VERSION NM_001313361.3
DBLINK BioProject: PRJNA158
KEYWORDS RefSeq.
SOURCE Caenorhabditis elegans
ORGANISM Caenorhabditis elegans
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
Caenorhabditis.
REFERENCE 1 (bases 1 to 3141)
AUTHORS Sulson,J.E. and Waterston,R.
CONSRTM Caenorhabditis elegans Sequencing Consortium
TITLE Genome sequence of the nematode C. elegans: a platform for
investigating biology
JOURNAL Science 282 (5396), 2012-2018 (1998)
PUBMED 9851916
REMARK Erratum:[Science 1999 Jan 1;283(5398):35]
REFERENCE 2 (bases 1 to 3141)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 3141)
AUTHORS WormBase.
CONSRTM WormBase Consortium
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics
Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org
REFERENCE 4 (bases 1 to 3141)
AUTHORS Sulson,J.E. and Waterston,R.
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger
Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute
at Washington University, St. Louis, MO 63110, USA
COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This
record is derived from an annotated genomic sequence (NC_003283).
On Apr 15, 2020 this sequence version replaced NM_001313361.2.
COMPLETENESS: incomplete on both ends.
FEATURES Location/Qualifiers
source 1..3141
/organism="Caenorhabditis elegans"
/mol_type="mRNA"
/strain="Bristol N2"
/db_xref="taxon:6239"
/chromosome="V"
gene <1..>3141
/gene="rga-4"
/locus_tag="CELE_Y75B7AL.4"
/db_xref="GeneID:178629"
/db_xref="WormBase:WBGene00022286"
CDS 1..3141
/gene="rga-4"
/locus_tag="CELE_Y75B7AL.4"
/standard_name="Y75B7AL.4e"
/note="Confirmed by transcript evidence"
/codon_start=1
/product="Rho-GAP domain-containing protein"
/protein_id="NP_001300290.1"
/db_xref="EnsemblGenomes-Gn:WBGene00022286"
/db_xref="EnsemblGenomes-Tr:Y75B7AL.4e"
/db_xref="GeneID:178629"
/db_xref="GOA:A0A0K3AT49"
/db_xref="InterPro:IPR000198"
/db_xref="InterPro:IPR008936"
/db_xref="UniProtKB/TrEMBL:A0A0K3AT49"
/db_xref="WormBase:WBGene00022286"
/translation="MDTDGIFRKEGNSVRLNRAEVQAIYKGQSDIPNDYSVIDVCTMV
KRFLRDLKPPLLDSEECRARLLKKACQARISDSFLMTRDEMADIFYLEDRTIEQQTPL
LSDVHASTLGYVMRQLYRIAAHSDQHKMSIENLAIVLVGSVFGDGIHDPRKTSQIRRG
SKEDILAQKRQDMSVNTAAVKLLITNANLIGVRRDPYVTSNAMLRSSSAMPRCMSSGY
ETSSSDADCLSSNIAQTAAAALHQRGEAGAGGPSTSLAIHRRDSEAVHKIVTSRKKGE
LLESKKKRSASFLPSFRDLKHRLSNMKRAKSPSPERLMTGHTAAAIEPPLTADTLDLY
TDHRKKVARNESNTMSTGSTASGRQSRSHQNRRGNTNAAPRSGGSGKNTISKMFEHEQ
QQVVPSSGGALRRLSANDQNTDAMRFAKQRVSNEQMSVAEFLISEHQRERECKIQKRN
TVILGEKSRSSKLTNRRHTAPINNNRLRRNRPNTVGAGLPHRKDGGSSLEEKENQADC
EETTDDTLDATNNVDHSEWLLEQKALEARSRRAGRKNKAATTTTTAMRNISTESMMVL
NGSMMAVESTTDVLKADPLVAMDVLKEESSPHTTTTPKNTPKVVLRKDLNDVKRMKQF
CDMATSPMVMDTPTKLSHENGHAWVGTKQVISVTRTPSLSRRQSRARLSYSKATESPL
DMPSSDVRRDSGSLMSPLLKHVTITNNSPPSQVITSSPRTNHLTPKSHTLSPLAVKIE
RSTPLPPPPIPPHSPPHLTPQRTSKVSLDAVSEMKRISISGGHARRPPTPPSHPRVSN
PFSPKLPIRSVTIDNGFELPATASTAAAAAGVPDETQFKLPQLPMPPKKKVSPLLARQ
ATHSSKSTTLSVPNRANLRETKSIDETPTALRSAPPAAQGSSSNQLSPRSSTDYFEFG
KYTNALRSATDEFALPTRKTSVESRPSVAILRSNNCGLVRSRVNHFQEIEHSQRVETS
MSGRLSAMSQSSLRSSNDTHQSSSDRFSDVSDLRNAAFSESTSDSALSTPTATPTTSR
VSTNDAAAAAAAAQHF"
ORIGIN
1 atggacactg acgggatttt ccgcaaggaa ggaaactctg ttcggctgaa tcgcgccgaa
61 gtacaggcaa tctacaaagg gcagagcgac attcctaacg actacagtgt tatcgacgtt
121 tgcacgatgg tgaagcggtt tcttcgcgat ctgaagccac cgctgctcga ttcagaagag
181 tgtcgagctc gacttctgaa gaaagcgtgc caagcgagaa tttcggatag tttcctgatg
241 acgcgagacg agatggcaga cattttctac ttggaggatc gcacaatcga gcaacagaca
301 ccgctgctct ccgatgtgca tgcttcaacg ctgggatatg tgatgagaca gctgtacaga
361 atcgccgctc acagtgacca gcacaagatg tcgattgaaa atttggcaat cgttctcgtc
421 ggaagtgtct tcggtgacgg tattcacgat ccgcgcaaaa cttcacagat ccgtcgtggc
481 tcgaaggagg atattttggc gcagaagcgg caggatatga gtgtgaacac ggcggcggtt
541 aaattattga ttactaatgc caatctaatt ggtgtccgtc gtgatccgta cgtgacaagt
601 aacgcgatgc tccgaagctc gagcgcgatg ccacgttgca tgagcagtgg atacgagacg
661 tcgtcgtctg atgcggattg tctatcgtcg aatatcgctc aaacagcagc agcggcgctc
721 caccagagag gagaagctgg agccggcggc ccgtcgacgt cactcgccat tcaccgccga
781 gactcggaag ctgttcacaa aatagtgact tcgcggaaga agggcgagtt gctggagtcg
841 aaaaaaaagc ggtccgcatc gtttctgccg agcttccgcg accttaaaca tcgcttgtcg
901 aacatgaagc gagccaagag cccaagtccg gagcgactca tgactggaca cactgctgct
961 gccatcgagc cgccattgac agcagacaca ctggatttgt acacggatca tcggaaaaag
1021 gtggcgcgaa acgagtcgaa taccatgtcg actggatcaa cggcgtctgg cagacaatcg
1081 agaagccatc agaatcggcg aggcaacacg aacgccgcac cgagaagtgg tggtagcgga
1141 aagaatacga tttcgaaaat gtttgagcac gagcagcagc aagttgtccc cagcagtggt
1201 ggagctcttc gacggctgtc ggctaacgat cagaataccg atgcgatgcg atttgcgaaa
1261 caacgggtgt ccaatgagca gatgagtgtt gcagaatttc tcatatccga gcatcaacgt
1321 gagcgagaat gtaaaatcca gaaacgcaat acagtgatat tgggcgagaa gtcgaggtcc
1381 tctaagctca caaaccgacg tcacacggct cccatcaaca acaataggct ccgcagaaat
1441 cggccgaaca ctgtgggcgc cggcctgcca catcgaaaag atggcggctc atcgctggag
1501 gagaaggaga atcaggcgga ctgcgaggag acgactgatg acaccctgga tgcaacgaac
1561 aatgtggatc attcggagtg gctgctggag cagaaggcac tggaagcgag gtcacggcga
1621 gcgggaagga agaacaaggc cgccaccacc accaccaccg cgatgagaaa tatcagcacg
1681 gaaagtatga tggtgctcaa tggatcgatg atggctgtgg aatcgacgac ggatgtgctg
1741 aaagcagatc cactggtggc gatggatgtg ttgaaagaag agtcgtcgcc acacacgacg
1801 acgacgccaa aaaacacgcc gaaagtcgtg ttgagaaagg atttgaacga tgtgaagagg
1861 atgaagcaat tctgtgacat ggcaacgtcg ccaatggtga tggatacgcc gacgaaactt
1921 tcacacgaga atggtcacgc gtgggttgga accaaacagg ttatatctgt gacgaggacg
1981 cctagcctgt cgcgacggca gagccgagct cgtctctcat actcgaaagc cacagaatct
2041 ccgctcgaca tgccatcatc cgacgttcgg cgagactcgg gctccctgat gtcgccgctg
2101 ttgaagcatg tgacgataac gaacaactcg ccgccttcgc aagtgatcac atcgtctcct
2161 agaaccaatc atctcactcc aaaatcacac acactttctc cattggccgt caaaattgag
2221 cgatctacac ctctgccgcc gccgccgatc cctccacact cgccacccca tcttactccg
2281 caaagaacct cgaaagtctc gttggatgct gtcagcgaga tgaaacgaat ctcgatatcg
2341 ggcggccatg cacgacggcc tccaactcct ccatcacatc cacgcgtgtc gaatccgttc
2401 tcgccgaagc tgcctattcg atctgtgacg atcgacaatg gattcgagct tcctgccact
2461 gcttccactg ctgctgctgc tgctggggta ccagatgaga cacagttcaa gcttccgcaa
2521 ttgccgatgc cgccgaagaa aaaagtgtct ccgctgcttg cccggcaagc cactcactca
2581 tcaaagtcga cgacgctttc ggtgccgaat cgagcgaatc ttcgagaaac gaagagcatc
2641 gatgaaactc cgacagcatt gagatcggca ccaccagcag ctcaaggatc ttcgtcgaat
2701 cagctgtcgc caagatcatc cactgattac ttcgagtttg gaaaatacac aaatgcgttg
2761 agatcggcga ctgatgagtt tgcgctgcca accaggaaaa cgtcagttga atctcgtcct
2821 tcagttgcaa ttctacggag taacaattgc ggtttggtac gatccagagt caatcatttc
2881 caggaaatcg aacattcgca acgcgtcgaa acatcgatga gcggtcgatt gtctgcaatg
2941 tcacaatcat cactccgaag cagcaatgat acacaccaat catcgtcgga tcgtttttcg
3001 gatgtctcgg atcttcggaa tgccgcgttc tctgaatcca cctcggactc ggcgctcagc
3061 actccaactg ccactccaac aacttcacgg gtctcgacga acgatgctgc tgctgctgct
3121 gctgctgcac aacatttcta a
//