Dbfetch
LOCUS NM_001313097 4212 bp mRNA linear INV 22-NOV-2023 DEFINITION Caenorhabditis elegans 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase (egl-8), partial mRNA. ACCESSION NM_001313097 VERSION NM_001313097.3 DBLINK BioProject: PRJNA158 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 4212) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 4212) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 4212) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 4212) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003283). On Apr 15, 2020 this sequence version replaced NM_001313097.2. COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..4212 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="V" gene <1..>4212 /gene="egl-8" /locus_tag="CELE_B0348.4" /db_xref="GeneID:178537" /db_xref="WormBase:WBGene00001177" CDS 1..4212 /gene="egl-8" /locus_tag="CELE_B0348.4" /standard_name="B0348.4p" /note="Confirmed by transcript evidence" /codon_start=1 /product="1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase" /protein_id="NP_001300026.1" /db_xref="EnsemblGenomes-Gn:WBGene00001177" /db_xref="EnsemblGenomes-Tr:B0348.4p" /db_xref="GeneID:178537" /db_xref="GOA:A0A0K3AUM3" /db_xref="InterPro:IPR000008" /db_xref="InterPro:IPR000909" /db_xref="InterPro:IPR001192" /db_xref="InterPro:IPR001711" /db_xref="InterPro:IPR009535" /db_xref="InterPro:IPR011992" /db_xref="InterPro:IPR015359" /db_xref="InterPro:IPR016280" /db_xref="InterPro:IPR017946" /db_xref="InterPro:IPR035892" /db_xref="InterPro:IPR037862" /db_xref="InterPro:IPR042531" /db_xref="UniProtKB/TrEMBL:A0A0K3AUM3" /db_xref="WormBase:WBGene00001177" /translation="MAKEFQFNWKPTIIPELLHGSVFDRYDDESTCLELNAQVRIDEN GFFLRWLIEGKDAVVLDMGQIWEARTGGLPKDGRIMFELEQRGASETIAERTIWITHG QDLVNVQSFFLVAESVELAKTCRAGINDILKSSRIRHVCPTTQLMKYHTWLTMNVNER RKIPIKLIIKTFSSGKPEKMVQKCLNDLGLGGDKEREELDVDILTFEKFQRLYNKICP RTEVQELFVKLSGQKEYLTKERLINFLNEEQRDPRLNEILFPFFDSQRIVALLKKHEN DIKYQEDGKMSGDGFLRFLMSDENPPVFLDRIEMFMDMDQPLCHYYINSSHNTYLTGR QYGGKSSSEIYRQVLLSGCRCIELDCWDGTGENKGEPIITHGKAMCTDVFFKDVLVQI RDTAFARSDFPVVLSFENHCSKSNQLKMAKYCMDIFGDMLLSKPFEDAPLDPGVSLPS PNRLRKKILIKNKRLKTDIERHQLDQFLREGKLDEEDELNETPEVVGEDSVSPRSGGS GGTGAPEEVDDDTSDDDDDPSVQTSLNVMRTIPTVNTTSNNGSNRSARSSLDTPSPSG GSLMVPDRATSTATSIKNAVLARSPNFSSLRQKLSFKRRQSPLAGDQRAHPEVEQPVS SSSPATPSISGPPPCATSSGSTSSITITTTGCSTSSSGPSKHILGGEMPAKENDEAHP ELKQNFIAKNLKGFGFSKKQPVLTKEEEERIFAEYHYTGATTNIHPLLSSLVNYTHPV KFSGFDVAEANNLHFHMSSFSESTGLGYLKQSAPEFVNYNKRQSSRIYPKGARVDSSN FLPQIFWNAGCQMVSLNFQTPDVYMQLNMGKFEYNGGSGYLLKPDFLRRPDRTFDPFS ESPVDGVIAAHCSVRVISGQFLSDRKIGTYVEVEMYGLPTDTIRKEHKTKVIPGNGLN PVYNEDPFVFRKVVLPELAVLRFAVYDENGKQLGQRILPLDGLQAGYRHISLRSDTNQ SFILSPVLFVQIVIKTYVPDELSGLVDALADPRAFLSEQKKRQEALAHMGVDDSDIPD VPNTRNMALRHVKQPPRQNGSSADLLANNGQTGSARGDQTSSMASSTIRSPNEQPQPV AVDKFKVDPIEVDDLRRDKAFAKLLKRFQKELDDLRKKHQKQRDSIQKQQPARRRNSS IAWIQTNVDKLITNNRRSTKKEKGSRRSLTASVSSGCGSASGTVTVSVCSPSGASCSG YSTGGPSTPVACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRHDEE EFELKKVQLKEQFDLLRKLMSEAQKNQMLALKLRLEAEGKDLKQTQTKKSMEDAKVIQ LDKGIKTKAERDRRVKELNEKNLKMFVEERKRLAMKAQKHEEQLTKRHLDQLEQLDKD FHKALDAEVGNYKEEQLAAQPTSVV" ORIGIN 1 atggcaaagg agttccagtt caattggaag cccactatta tccctgaact tcttcatgga 61 tcggttttcg atcgatatga tgatgaaagt acgtgtctgg aactaaatgc tcaagttcga 121 attgacgaga acggtttctt tctccggtgg ctgatcgaag gaaaagatgc tgtcgtactc 181 gatatgggcc aaatatggga agctcgcacg ggcggcctac ccaaagacgg ccgaattatg 241 ttcgaattgg agcagcgcgg agccagcgaa acgatagctg aacgcacgat atggatcacg 301 catggccagg atttagtcaa tgttcagtcg ttttttcttg tcgccgaaag tgtcgagttg 361 gcaaaaacgt gtagagcggg cattaatgat attctaaagt cgtccagaat acgacacgtg 421 tgtccaacta cccaattgat gaaataccat acatggctca ccatgaatgt caacgaacga 481 cgaaaaatcc cgatcaagtt gataatcaaa acattttcgt ctggaaaacc tgaaaaaatg 541 gttcaaaagt gtctaaatga cttgggtctt ggaggcgata aggagcgcga agaacttgac 601 gtcgacatcc tcacctttga aaaattccag aggctctata acaagatttg tccgagaacc 661 gaagttcaag agctgtttgt taaattatcc ggacagaaag agtacctaac caaagagcga 721 ctcatcaatt ttctgaatga agaacaacgt gatccacgac tcaacgagat cctcttccca 781 ttttttgatt ctcagcgtat cgttgcgctt ctcaaaaaac acgaaaacga cataaaatat 841 caagaagatg gaaaaatgtc cggtgacggg tttctccgat tcctgatgtc agacgagaac 901 ccgccagtgt ttctagaccg aattgaaatg tttatggata tggatcaacc gctgtgtcac 961 tactacatca atagttccca taacacgtat cttaccggac ggcagtatgg tggaaaatcg 1021 tcttctgaga tttatcgaca agttttgctc agcggatgta ggtgtattga gcttgattgt 1081 tgggatggta ctggtgaaaa taaaggagaa cccattatca ctcacggaaa ggccatgtgc 1141 acagacgtgt tcttcaagga cgtcctggta caaattcgag acaccgcatt tgcccggtcg 1201 gattttccag tggtcctttc cttcgaaaac cattgctcaa aatcaaatca gctgaaaatg 1261 gccaaatatt gtatggacat ttttggagat atgctgctgt ccaaaccgtt tgaagatgcg 1321 cctcttgacc ccggagtctc cctaccttct ccaaaccgcc tgcgaaagaa gatccttatc 1381 aaaaataagc gattaaaaac cgacatcgaa cgtcaccaac ttgaccaatt tctgcgggaa 1441 ggcaaactgg acgaggagga cgagctgaat gagacgcccg aagttgtcgg agaggactcc 1501 gtatcacctc gaagcggcgg gagcggtggc accggagccc cggaagaagt ggatgatgac 1561 acgtccgacg acgacgatga cccgtcggtt cagacatcgc tgaacgtgat gcgcaccatc 1621 ccgaccgtga acaccacatc gaacaacgga tcgaatcgat cggcaagaag ttcactggac 1681 accccatccc catccggtgg gagcctgatg gttccagata gggcaacatc gacagcgacg 1741 tcgatcaaga acgccgtgct cgcgaggtct ccgaacttct cctcgttgag acaaaagttg 1801 tcgttcaagc ggagacaatc accactagca ggcgatcagc gtgctcatcc ggaagtcgag 1861 caacccgtga gctcatcctc tccagccaca ccgtccatca gcggaccccc gccgtgtgcc 1921 acgtcatcag gttcaacgtc atcaatcact attaccacaa cgggatgctc cacgtcatcg 1981 tcgggaccct caaaacatat tctagggggt gaaatgcccg ccaaggaaaa cgacgaagca 2041 catccggagc taaagcagaa tttcattgct aaaaatttga aaggattcgg gttttcgaaa 2101 aaacaaccgg tactgacaaa agaagaagag gagcggattt tcgccgagta tcattatacc 2161 ggggcaacta cgaatataca tccgttactc tcttcactgg tcaattatac acatcctgtc 2221 aagttttctg gatttgacgt tgcggaagcc aacaacctgc acttccacat gtcctcattt 2281 tctgagtcaa ccggtctcgg ctacctaaaa caatcggcgc cggaatttgt gaactacaac 2341 aaacgacaat cgagtagaat ttatccgaaa ggagccagag ttgattcttc caattttttg 2401 ccgcaaattt tctggaacgc cggatgtcaa atggtgtcgc tcaactttca aactcccgat 2461 gtctacatgc aattgaacat gggaaaattc gagtacaacg gtggctcggg gtatctgcta 2521 aaaccagatt tcctccgaag acccgacaga acattcgacc cattttccga gagcccggtg 2581 gacggagtga ttgcagcaca ttgtagtgtt cgtgtcatct cgggtcaatt cctatcggat 2641 cgcaaaatcg ggacatacgt tgaggtggaa atgtacggac tacctactga cactattcgt 2701 aaggagcaca agacgaaggt aatacccggg aacggactga atccagttta caacgaggat 2761 ccgtttgtct tccgaaaagt tgtgctcccc gagctcgccg tgctccggtt cgccgtctac 2821 gatgagaacg gcaagcagct gggtcagcgg attcttccgc tggatgggct tcaggcagga 2881 tatcggcata tttcgctgag gtctgacacg aatcagagct tcattctgtc acctgtgctc 2941 tttgtgcaaa ttgtgatcaa gacttatgtg ccggatgagc tcagtggcct cgtcgatgct 3001 ctcgccgacc cacgagcatt cctctcggag cagaaaaaaa ggcaggaagc cctggctcac 3061 atgggtgttg acgatagtga tattcctgat gtgcccaaca ccaggaatat ggctctccga 3121 cacgtgaaac aacctccaag gcagaacgga tcgtcagctg atctgctggc aaacaacggc 3181 caaactgggt cggctagggg tgatcagacc agctcgatgg cttcaagtac tattcggtca 3241 cccaacgaac aaccgcagcc agtggctgtg gataaattta aggttgaccc aatcgaagtt 3301 gacgatttac gacgagacaa agcttttgca aaattgctca agagatttca aaaagagttg 3361 gatgatctca ggaagaaaca tcagaagcag agggatagca ttcaaaaaca gcagccggct 3421 cgccgccgta attcgtccat agcgtggatc caaaccaacg tcgacaagct catcacaaat 3481 aaccgacgtt ccacgaaaaa agaaaaaggc tcaaggagat ccctgacggc ttcagtatca 3541 tctggatgtg gaagtgcatc tggaactgtg actgtcagtg tttgcagtcc ttctggcgcg 3601 agttgcagtg ggtactccac tgggggtcct tcgacaccgg tggcatgtaa ctctgatggt 3661 accgggtctc cagcgactat tggaagtcca gtgccacaag atttggtcaa taatgatagg 3721 gtccgatctc tcgtgaacac tcaaaccgga gaatggtccg ctatggtccg tagacatgac 3781 gaggaagagt ttgagctgaa aaaagtacag ctcaaagagc aattcgatct gctaagaaaa 3841 ctcatgagtg aagctcaaaa gaaccaaatg ttggctctga agctccggtt agaagccgaa 3901 gggaaagatc taaagcagac gcagacgaaa aaaagcatgg aagatgcgaa agttattcaa 3961 ttggacaaag gtattaagac caaggcagaa cgtgatcgtc gtgtcaagga actcaacgag 4021 aagaacctga aaatgtttgt ggaggagagg aagagattag ccatgaaagc ccaaaagcac 4081 gaagagcaac tcacaaaacg acatctcgac cagctcgagc aactagacaa ggatttccat 4141 aaggccttgg atgcggaggt cggcaactac aaagaagagc aactggctgc tcaaccgact 4201 tctgtcgttt ga //