Dbfetch
LOCUS NM_001313089 4693 bp mRNA linear INV 22-NOV-2023 DEFINITION Caenorhabditis elegans 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase (egl-8), mRNA. ACCESSION NM_001313089 VERSION NM_001313089.4 DBLINK BioProject: PRJNA158 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 4693) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 4693) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 4693) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 4693) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003283). On May 27, 2020 this sequence version replaced NM_001313089.3. FEATURES Location/Qualifiers source 1..4693 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="V" gene 1..4693 /gene="egl-8" /locus_tag="CELE_B0348.4" /db_xref="GeneID:178537" /db_xref="WormBase:WBGene00001177" CDS 190..4167 /gene="egl-8" /locus_tag="CELE_B0348.4" /standard_name="B0348.4h" /note="Confirmed by transcript evidence" /codon_start=1 /product="1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase" /protein_id="NP_001300018.1" /db_xref="EnsemblGenomes-Gn:WBGene00001177" /db_xref="EnsemblGenomes-Tr:B0348.4h" /db_xref="GeneID:178537" /db_xref="GOA:A0A0K3AV83" /db_xref="InterPro:IPR000008" /db_xref="InterPro:IPR000909" /db_xref="InterPro:IPR001192" /db_xref="InterPro:IPR001711" /db_xref="InterPro:IPR009535" /db_xref="InterPro:IPR011992" /db_xref="InterPro:IPR015359" /db_xref="InterPro:IPR016280" /db_xref="InterPro:IPR017946" /db_xref="InterPro:IPR035892" /db_xref="InterPro:IPR037862" /db_xref="InterPro:IPR042531" /db_xref="UniProtKB/TrEMBL:A0A0K3AV83" /db_xref="WormBase:WBGene00001177" /translation="MAKEFQFNWKPTIIPELLHGSVFDRYDDESTCLELNAQVRIDEN GFFLRWLIEGKDAVVLDMGQIWEARTGGLPKDGRIMFELEQRGASETIAERTIWITHG QDLVNVQSFFLVAESVELAKTCRAGINDILKSSRIRHVCPTTQLMKYHTWLTMNVNER RKIPIKLIIKTFSSGKPEKMVQKCLNDLGLGGDKYTPARVINRSMGKKFRNFYKCSRG RKRKEREELDVDILTFEKFQRLYNKICPRTEVQELFVKLSGQKEYLTKERLINFLNEE QRDPRLNEILFPFFDSQRIVALLKKHENDIKYQEDGKMSGDGFLRFLMSDENPPVFLD RIEMFMDMDQPLCHYYINSSHNTYLTGRQYGGKSSSEIYRQVLLSGCRCIELDCWDGT GENKGEPIITHGKAMCTDVFFKDVLVQIRDTAFARSDFPVVLSFENHCSKSNQLKMAK YCMDIFGDMLLSKPFEDAPLDPGVSLPSPNRLRKKILIKNKRLKTDIERHQLDQFLRE GKLDEEDELNETPEVVGEDSVSPPGDQRAHPEVEQPVSSSSPATPSISGPPPCATSSG STSSITITTTGCSTSSSGPSKHILGGEMPAKENDEAHPELKQNFIAKNLKGFGFSKKQ PVLTKEEEERIFAEYHYTGATTNIHPLLSSLVNYTHPVKFSGFDVAEANNLHFHMSSF SESTGLGYLKQSAPEFVNYNKRQSSRIYPKGARVDSSNFLPQIFWNAGCQMVSLNFQT PDVYMQLNMGKFEYNGGSGYLLKPDFLRRPDRTFDPFSESPVDGVIAAHCSVRVISGQ FLSDRKIGTYVEVEMYGLPTDTIRKEHKTKVIPGNGLNPVYNEDPFVFRKVVLPELAV LRFAVYDENGKQLGQRILPLDGLQAGYRHISLRSDTNQSFILSPVLFVQIVIKTYVPD ELSGLVDALADPRAFLSEQKKRQEALAHMGVDDSDIPDVPNTRNMALRHVKQPPRQNG SSADLLANNGQTGSARGDQTSSMASSTIRSPNEQPQPVAVDKFKVDPIEVDDLRRDKA FAKLLKRFQKELDDLRKKHQKQRDSIQKQQPARRRNSSIAWIQTNVDKLITNNRRSTK KEKGSRRSLTASVSSGCGSASGTVTVSVCSPSGASCSGYSTGGPSTPVACNSDGTGSP ATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRHDEEEFELKKVQLKEQFDLLRKLM SEAQKNQMLALKLRLEAEGKDLKQTQTKKSMEDAKVIQLDKGIKTKAERDRRVKELNE KNLKMFVEERKRLAMKAQKHEEQLTKRHLDQLEQLDKDFHKALDAEVGNYKEEQLAAQ PTSVV" ORIGIN 1 ttttcagcca gacccctctc cacacgtact ctatatcggc tcaacacaca cggaggagag 61 ccacgtggca gggaaagacg acggcgcaac gtcgtcgcgt cgccttcttc gcatcttctg 121 aatatttcag aagaaggaga attattgtag ttgaagactt tattttttcc tggtaaccgg 181 caagaagaga tggcaaagga gttccagttc aattggaagc ccactattat ccctgaactt 241 cttcatggat cggttttcga tcgatatgat gatgaaagta cgtgtctgga actaaatgct 301 caagttcgaa ttgacgagaa cggtttcttt ctccggtggc tgatcgaagg aaaagatgct 361 gtcgtactcg atatgggcca aatatgggaa gctcgcacgg gcggcctacc caaagacggc 421 cgaattatgt tcgaattgga gcagcgcgga gccagcgaaa cgatagctga acgcacgata 481 tggatcacgc atggccagga tttagtcaat gttcagtcgt tttttcttgt cgccgaaagt 541 gtcgagttgg caaaaacgtg tagagcgggc attaatgata ttctaaagtc gtccagaata 601 cgacacgtgt gtccaactac ccaattgatg aaataccata catggctcac catgaatgtc 661 aacgaacgac gaaaaatccc gatcaagttg ataatcaaaa cattttcgtc tggaaaacct 721 gaaaaaatgg ttcaaaagtg tctaaatgac ttgggtcttg gaggcgataa gtacacgccg 781 gcacgggtca tcaatcgatc gatgggcaag aagtttcgga atttctacaa gtgcagtcgg 841 ggacgaaaac gaaaggagcg cgaagaactt gacgtcgaca tcctcacctt tgaaaaattc 901 cagaggctct ataacaagat ttgtccgaga accgaagttc aagagctgtt tgttaaatta 961 tccggacaga aagagtacct aaccaaagag cgactcatca attttctgaa tgaagaacaa 1021 cgtgatccac gactcaacga gatcctcttc ccattttttg attctcagcg tatcgttgcg 1081 cttctcaaaa aacacgaaaa cgacataaaa tatcaagaag atggaaaaat gtccggtgac 1141 gggtttctcc gattcctgat gtcagacgag aacccgccag tgtttctaga ccgaattgaa 1201 atgtttatgg atatggatca accgctgtgt cactactaca tcaatagttc ccataacacg 1261 tatcttaccg gacggcagta tggtggaaaa tcgtcttctg agatttatcg acaagttttg 1321 ctcagcggat gtaggtgtat tgagcttgat tgttgggatg gtactggtga aaataaagga 1381 gaacccatta tcactcacgg aaaggccatg tgcacagacg tgttcttcaa ggacgtcctg 1441 gtacaaattc gagacaccgc atttgcccgg tcggattttc cagtggtcct ttccttcgaa 1501 aaccattgct caaaatcaaa tcagctgaaa atggccaaat attgtatgga catttttgga 1561 gatatgctgc tgtccaaacc gtttgaagat gcgcctcttg accccggagt ctccctacct 1621 tctccaaacc gcctgcgaaa gaagatcctt atcaaaaata agcgattaaa aaccgacatc 1681 gaacgtcacc aacttgacca atttctgcgg gaaggcaaac tggacgagga ggacgagctg 1741 aatgagacgc ccgaagttgt cggagaggac tccgtatcac ctccaggcga tcagcgtgct 1801 catccggaag tcgagcaacc cgtgagctca tcctctccag ccacaccgtc catcagcgga 1861 cccccgccgt gtgccacgtc atcaggttca acgtcatcaa tcactattac cacaacggga 1921 tgctccacgt catcgtcggg accctcaaaa catattctag ggggtgaaat gcccgccaag 1981 gaaaacgacg aagcacatcc ggagctaaag cagaatttca ttgctaaaaa tttgaaagga 2041 ttcgggtttt cgaaaaaaca accggtactg acaaaagaag aagaggagcg gattttcgcc 2101 gagtatcatt ataccggggc aactacgaat atacatccgt tactctcttc actggtcaat 2161 tatacacatc ctgtcaagtt ttctggattt gacgttgcgg aagccaacaa cctgcacttc 2221 cacatgtcct cattttctga gtcaaccggt ctcggctacc taaaacaatc ggcgccggaa 2281 tttgtgaact acaacaaacg acaatcgagt agaatttatc cgaaaggagc cagagttgat 2341 tcttccaatt ttttgccgca aattttctgg aacgccggat gtcaaatggt gtcgctcaac 2401 tttcaaactc ccgatgtcta catgcaattg aacatgggaa aattcgagta caacggtggc 2461 tcggggtatc tgctaaaacc agatttcctc cgaagacccg acagaacatt cgacccattt 2521 tccgagagcc cggtggacgg agtgattgca gcacattgta gtgttcgtgt catctcgggt 2581 caattcctat cggatcgcaa aatcgggaca tacgttgagg tggaaatgta cggactacct 2641 actgacacta ttcgtaagga gcacaagacg aaggtaatac ccgggaacgg actgaatcca 2701 gtttacaacg aggatccgtt tgtcttccga aaagttgtgc tccccgagct cgccgtgctc 2761 cggttcgccg tctacgatga gaacggcaag cagctgggtc agcggattct tccgctggat 2821 gggcttcagg caggatatcg gcatatttcg ctgaggtctg acacgaatca gagcttcatt 2881 ctgtcacctg tgctctttgt gcaaattgtg atcaagactt atgtgccgga tgagctcagt 2941 ggcctcgtcg atgctctcgc cgacccacga gcattcctct cggagcagaa aaaaaggcag 3001 gaagccctgg ctcacatggg tgttgacgat agtgatattc ctgatgtgcc caacaccagg 3061 aatatggctc tccgacacgt gaaacaacct ccaaggcaga acggatcgtc agctgatctg 3121 ctggcaaaca acggccaaac tgggtcggct aggggtgatc agaccagctc gatggcttca 3181 agtactattc ggtcacccaa cgaacaaccg cagccagtgg ctgtggataa atttaaggtt 3241 gacccaatcg aagttgacga tttacgacga gacaaagctt ttgcaaaatt gctcaagaga 3301 tttcaaaaag agttggatga tctcaggaag aaacatcaga agcagaggga tagcattcaa 3361 aaacagcagc cggctcgccg ccgtaattcg tccatagcgt ggatccaaac caacgtcgac 3421 aagctcatca caaataaccg acgttccacg aaaaaagaaa aaggctcaag gagatccctg 3481 acggcttcag tatcatctgg atgtggaagt gcatctggaa ctgtgactgt cagtgtttgc 3541 agtccttctg gcgcgagttg cagtgggtac tccactgggg gtccttcgac accggtggca 3601 tgtaactctg atggtaccgg gtctccagcg actattggaa gtccagtgcc acaagatttg 3661 gtcaataatg atagggtccg atctctcgtg aacactcaaa ccggagaatg gtccgctatg 3721 gtccgtagac atgacgagga agagtttgag ctgaaaaaag tacagctcaa agagcaattc 3781 gatctgctaa gaaaactcat gagtgaagct caaaagaacc aaatgttggc tctgaagctc 3841 cggttagaag ccgaagggaa agatctaaag cagacgcaga cgaaaaaaag catggaagat 3901 gcgaaagtta ttcaattgga caaaggtatt aagaccaagg cagaacgtga tcgtcgtgtc 3961 aaggaactca acgagaagaa cctgaaaatg tttgtggagg agaggaagag attagccatg 4021 aaagcccaaa agcacgaaga gcaactcaca aaacgacatc tcgaccagct cgagcaacta 4081 gacaaggatt tccataaggc cttggatgcg gaggtcggca actacaaaga agagcaactg 4141 gctgctcaac cgacttctgt cgtttgattt aagattcatg ccaacaactt tttaaacatt 4201 cctcccagta aaacacttct acgaaacgtg tcagtaggcg agcacttgca ttatcgattt 4261 tttttacttt agattatcga tattttccag gaaaaatcga taaatcaata gcattttttt 4321 caaaagagta tcttattcaa ttattaaata gaaaaacccc atgaacaaac aaacagacaa 4381 acaaaatgct taattatcag attcccactc ccgattccgt tccatccaaa tgtttcattc 4441 ctttcctcac aatttttggg tattattttt tttcagaaat tcagattagt ggtatttttt 4501 atatatttta tctgttctcc ccatcccgtt ccgcgtcttg aaaaaaattt cacgaagttc 4561 cgcaaattct ctctctctat tgccactatc tcttcgtgtc cttttcccct gcgattctgg 4621 tattttttga aagtttccta attttttttg atttgaaaat gaaaaaagtt ttaatgaaaa 4681 ttatatattt gag //