Dbfetch
LOCUS NM_001313017 1893 bp mRNA linear INV 22-NOV-2023
DEFINITION Caenorhabditis elegans C-type lectin domain-containing protein
(clec-199), partial mRNA.
ACCESSION NM_001313017
VERSION NM_001313017.3
DBLINK BioProject: PRJNA158
KEYWORDS RefSeq.
SOURCE Caenorhabditis elegans
ORGANISM Caenorhabditis elegans
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
Caenorhabditis.
REFERENCE 1 (bases 1 to 1893)
AUTHORS Sulson,J.E. and Waterston,R.
CONSRTM Caenorhabditis elegans Sequencing Consortium
TITLE Genome sequence of the nematode C. elegans: a platform for
investigating biology
JOURNAL Science 282 (5396), 2012-2018 (1998)
PUBMED 9851916
REMARK Erratum:[Science 1999 Jan 1;283(5398):35]
REFERENCE 2 (bases 1 to 1893)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1893)
AUTHORS WormBase.
CONSRTM WormBase Consortium
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics
Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org
REFERENCE 4 (bases 1 to 1893)
AUTHORS Sulson,J.E. and Waterston,R.
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger
Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute
at Washington University, St. Louis, MO 63110, USA
COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This
record is derived from an annotated genomic sequence (NC_003282).
On Apr 15, 2020 this sequence version replaced NM_001313017.2.
COMPLETENESS: incomplete on both ends.
FEATURES Location/Qualifiers
source 1..1893
/organism="Caenorhabditis elegans"
/mol_type="mRNA"
/strain="Bristol N2"
/db_xref="taxon:6239"
/chromosome="IV"
gene <1..>1893
/gene="clec-199"
/locus_tag="CELE_C30H6.1"
/db_xref="GeneID:183064"
/db_xref="WormBase:WBGene00007820"
CDS 1..1893
/gene="clec-199"
/locus_tag="CELE_C30H6.1"
/standard_name="C30H6.1o"
/note="Partially confirmed by transcript evidence"
/codon_start=1
/product="C-type lectin domain-containing protein"
/protein_id="NP_001299946.1"
/db_xref="EnsemblGenomes-Gn:WBGene00007820"
/db_xref="EnsemblGenomes-Tr:C30H6.1o"
/db_xref="GeneID:183064"
/db_xref="GOA:A0A0K3AV10"
/db_xref="InterPro:IPR001304"
/db_xref="InterPro:IPR016186"
/db_xref="InterPro:IPR016187"
/db_xref="UniProtKB/TrEMBL:A0A0K3AV10"
/db_xref="WormBase:WBGene00007820"
/translation="MNRFFCLTVLFSYLYRFTFSANDNAKIDNLVARQYLFSNFVANN
REALKKSDGSDERWLFKFMNENSIIPPTSNSKSGSLADSGQAGLVLADAIGTAKCASG
WTRWTGNGCCYKEMASPMLSWYASEDWCYSQKAGAHLASVHSRAEAEWLNYQYKLWWS
KMDDWIGLRRNCDNTAWAWTDGTPVDFLWWQPNYPIYGGIEDSCTAMWDSTVLRGMYD
FYPGQMDDGRSCTGSVAWALCKYDPNTSIISPKWVKADCTTTSTTTTSTTTTTTPTTP
TTTTTTPTTTTTETTTTPTTETTTTPTTTTPTTTTTTPTTTTTETTTTPTTTTTETTT
TPTTTTTTPTTTTTETTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTT
TTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTTSETTT
TTPTTTTQTTTKPTTTTTTPTTAKTTKSTTTTTKTTKTTSTPTTTTTTPKTPFDTSKC
TVMCSTGWVYYNNLCYAKLQGPGRLNDFNKECISYGGKIAEIPDAQVNDVLRKSFGTN
INDEEAWVISSGYNNVASGYTAAADSCIAMTLSQKISGSVAQRGTWRPYACSLAKNFG
ICQKPI"
ORIGIN
1 atgaatcggt ttttttgttt gactgttttg ttttcctact tatacagatt tacattttct
61 gcaaatgata atgctaaaat tgataacctt gtcgctcgtc aatatttatt ctcgaacttt
121 gttgcgaaca acagagaagc tttgaaaaaa tcggacggtt ctgatgaacg ctggctattt
181 aaatttatga acgaaaattc tataattcca ccaacttcaa actcaaaaag tggcagccta
241 gcagactctg gccaggctgg tcttgttctt gctgatgcta ttggaacagc aaaatgtgca
301 tctggttgga cgagatggac tggaaatgga tgttgctata aggaaatggc gtctccgatg
361 ctttcgtggt atgcttcaga agattggtgt tatagtcaaa aagctggagc acatttagct
421 tcagttcata gcagggcaga agctgagtgg ctaaattacc aatataaact ttggtggtct
481 aaaatggacg attggatcgg gttgagaaga aactgtgaca atacagcttg ggcatggacc
541 gatggcactc cggtggattt cctctggtgg caaccgaatt atccgattta tggcggaata
601 gaggacagtt gtactgctat gtgggactct acggttctcc gtggaatgta tgatttctac
661 ccaggacaaa tggatgatgg aagatcgtgc acgggcagtg ttgcatgggc gctgtgcaaa
721 tatgatccaa atacttcaat tatttctcca aaatgggtta aggcagattg tactactaca
781 tcgacgacta ctacgtccac aacaacaacc acaactccaa cgactccaac gaccacgacc
841 actacgccaa caacaactac aacggaaacc accacaacgc caacaacgga aactaccacc
901 actcccacaa ccacaacgcc gacaactacg acaacgactc cgacaacaac tacgacggaa
961 accactacaa ctccgacaac cactactacg gaaaccacta caactccgac cactacaacc
1021 acaacaccaa caacaactac tacggaaact acaacaacaa caccaacgac gacgacaacc
1081 actccaacta ccacaacgac aacaccaaca actaccacga cgactcctac aacaacaact
1141 actacaccaa ctaccactac gacggcaccg acaacaacaa ccacaactcc aacgactacc
1201 actacgactc ctacaacaac tactaccgta ccaacaacta caacaacaac tcccactact
1261 acaaccacta caaccactac accaacaaca acaacaacga caccgacaac tacaaccact
1321 ccagcaacga ctactagcga aacaactaca acgacgccaa ctactacaac tcaaaccaca
1381 acgaagccta caactactac aactacacca acgacagcaa aaactacaaa gtccacgaca
1441 accactacaa aaactacaaa aaccacatct accccaacta caaccactac aacacccaaa
1501 actccattcg acacgtcaaa gtgtactgtc atgtgctcaa ctggttgggt gtattataat
1561 aatttatgtt atgcgaaact tcaaggtcct ggtagactca atgatttcaa taaagaatgc
1621 atcagttatg gtggaaaaat tgctgagata ccggatgctc aagtaaatga tgtgttgaga
1681 aaatcattcg gaacaaatat caatgacgaa gaagcgtggg taatttctag tgggtacaac
1741 aacgtggcaa gtggatatac tgctgctgct gattcatgta ttgctatgac tctatctcaa
1801 aaaatcagtg gttcagtggc gcaacgagga acttggagac cttatgcatg ctcacttgcc
1861 aagaattttg gaatttgtca gaaacctatt tga
//