Dbfetch
LOCUS NM_001307771 808 bp mRNA linear INV 22-NOV-2023
DEFINITION Caenorhabditis elegans Homeobox protein unc-42 (unc-42), mRNA.
ACCESSION NM_001307771
VERSION NM_001307771.2
DBLINK BioProject: PRJNA158
KEYWORDS RefSeq.
SOURCE Caenorhabditis elegans
ORGANISM Caenorhabditis elegans
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
Caenorhabditis.
REFERENCE 1 (bases 1 to 808)
AUTHORS Sulson,J.E. and Waterston,R.
CONSRTM Caenorhabditis elegans Sequencing Consortium
TITLE Genome sequence of the nematode C. elegans: a platform for
investigating biology
JOURNAL Science 282 (5396), 2012-2018 (1998)
PUBMED 9851916
REMARK Erratum:[Science 1999 Jan 1;283(5398):35]
REFERENCE 2 (bases 1 to 808)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 808)
AUTHORS WormBase.
CONSRTM WormBase Consortium
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics
Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org
REFERENCE 4 (bases 1 to 808)
AUTHORS Sulson,J.E. and Waterston,R.
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger
Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute
at Washington University, St. Louis, MO 63110, USA
COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This
record is derived from an annotated genomic sequence (NC_003283).
On May 27, 2020 this sequence version replaced NM_001307771.1.
FEATURES Location/Qualifiers
source 1..808
/organism="Caenorhabditis elegans"
/mol_type="mRNA"
/strain="Bristol N2"
/db_xref="taxon:6239"
/chromosome="V"
gene 1..808
/gene="unc-42"
/locus_tag="CELE_F58E6.10"
/db_xref="GeneID:192081"
/db_xref="WormBase:WBGene00006778"
CDS 56..697
/gene="unc-42"
/locus_tag="CELE_F58E6.10"
/standard_name="F58E6.10d"
/note="Confirmed by transcript evidence"
/codon_start=1
/product="Homeobox protein unc-42"
/protein_id="NP_001294700.1"
/db_xref="EnsemblGenomes-Gn:WBGene00006778"
/db_xref="EnsemblGenomes-Tr:F58E6.10d"
/db_xref="GeneID:192081"
/db_xref="GOA:N1NVB9"
/db_xref="InterPro:IPR001356"
/db_xref="InterPro:IPR009057"
/db_xref="InterPro:IPR017970"
/db_xref="UniProtKB/TrEMBL:N1NVB9"
/db_xref="WormBase:WBGene00006778"
/translation="MYYYDGAFKKIKTEGLGGSVFGSSIAGVTNTPARRRHRTTFTQE
QLQELDAAFQKSHYPDIYVREELARITKLNEARIQVWFQNRRAKHRKHEKQLNKAINP
PHSFLSNPANTLMRQGMYPAALNRDGFWYQSYQRPMPYPTASPSYSNSFTNPIANFGH
SITSFQADDEFYQKSLALRMTTTPSAATAATSLANINYQQTQPSEASTNPPSI"
ORIGIN
1 ttactatttt agtacttgtg tgagcagatt taggaattaa caactcaatc taacaatgta
61 ttattatgat ggcgccttca aaaagattaa aaccgaagga ctcggtggct cggtatttgg
121 atcttcgatt gctggggtca cgaacacgcc tgcaaggcgg agacatcgga cgacattcac
181 tcaggaacaa cttcaggagc ttgatgctgc attccaaaag agtcactatc cggatatcta
241 cgttcgagag gaattggcaa ggatcaccaa gttgaatgaa gctcgaatac aggtgtggtt
301 ccaaaatcgg cgagcaaaac atcggaagca tgaaaaacaa ttgaataagg caatcaatcc
361 cccgcactca ttcctatcca atccagcgaa tactttgatg cgacaaggaa tgtacccagc
421 tgcattgaat cgtgacggtt tttggtatca atcatatcaa cgaccaatgc catacccaac
481 agcttctcct tcatattcca actcgttcac taatcccatt gcaaatttcg gtcattccat
541 cacctctttc caagctgacg acgagttcta ccagaaaagt ttggcacttc gaatgacgac
601 gacaccatcg gccgctacag ctgctacctc acttgctaat attaactacc agcagacaca
661 accatctgaa gctagtacca accctccttc aatctagtca ttaacattac aaccagacat
721 ttctaatctc caaagttaac agaaaatcca ataatttatg attgcgtgtg aaatcaattg
781 aacaaataat aaagagatct cactgata
//