Dbfetch
LOCUS NM_001307759 4028 bp mRNA linear INV 22-NOV-2023 DEFINITION Caenorhabditis elegans Ubiquitin carboxyl-terminal hydrolase 7 (math-33), mRNA. ACCESSION NM_001307759 VERSION NM_001307759.4 DBLINK BioProject: PRJNA158 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 4028) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 4028) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 4028) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 4028) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003283). On May 27, 2020 this sequence version replaced NM_001307759.3. FEATURES Location/Qualifiers source 1..4028 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="V" gene 1..4028 /gene="math-33" /locus_tag="CELE_H19N07.2" /db_xref="GeneID:179538" /db_xref="WormBase:WBGene00010406" CDS 112..3519 /gene="math-33" /locus_tag="CELE_H19N07.2" /standard_name="H19N07.2p" /note="Partially confirmed by transcript evidence" /codon_start=1 /product="Ubiquitin carboxyl-terminal hydrolase 7" /protein_id="NP_001294688.1" /db_xref="EnsemblGenomes-Gn:WBGene00010406" /db_xref="EnsemblGenomes-Tr:H19N07.2p" /db_xref="GeneID:179538" /db_xref="GOA:N1NSE3" /db_xref="InterPro:IPR001394" /db_xref="InterPro:IPR002083" /db_xref="InterPro:IPR008974" /db_xref="InterPro:IPR018200" /db_xref="InterPro:IPR024729" /db_xref="InterPro:IPR028889" /db_xref="InterPro:IPR029346" /db_xref="InterPro:IPR038765" /db_xref="UniProtKB/TrEMBL:N1NSE3" /db_xref="WormBase:WBGene00010406" /translation="MQCSPDPEDLLIVPTHDIPSYDESLDPFGPEGHLSLDIDCFSKF MSRSDNRIMSKPIIVRGIPWRILAICRGSRNQQGSRHSMNSRVNRSNFNFGFFLQCNN DELLQKRGMWRCYGTAVLEVLNADGPSIQKKIHHSFHNTEVDWGFSNYDQYDTLCNPK DGYVVNDTIKLRCRFTADVPTGANYMWDSKRHTGCIGLRNQGATCYMNSILQSFYFTT GFRRAVYNMDVGTEPNESNIVLAMQRVFYELQMASEAVETNSLTRAFGWDKLDAFNQH DVQEFCRVLLDNLETKMKGTSEEKSIPNLFRGNMKSYIKCLDVDYESSRTESFYDVQL NVLGMDSLERAFEAYTTSEILDDENKYDAGDHGLQRAEKGVKFVELPPILHVQLMRFQ YCGVEQKINERFSFPEKMNLASCCELGPMLTEEDCVYSLHAVLVHSGEFHGGHYVTYI NVNLHESAVDPTSSAKWCKFDDDVVSRTTTDDAIVSNFGGEKTMNSSAYMLVYVRDNA IDQFLAPIPDSQIPQSVSRTFEMERLHRNREKKKLEEEQLCMGIVLVTPDIVASNHSF DLVDQSIVHDSIPHETVWKHMFTAELYQFVHDRLFEKSAMQKIDMFDSDDEARQARRD NLRRIKSKKFNFRLWRMTDSYSLERTTQKLTSRLRPSEFIDCKTDTRLDTLLSQDFET IYVEFSNNIERPLCEYDTARDLLFFVKYYDTMTDKFTIIGHTMFDCHKRFNLYRSMLC EMIGLPADTELKYYMEHAASYLELVDLTQNYSIGRLVEEQDGGILVVEKVETSTSTQN AKQKMNELFLDVEVEFVQSFYNKKPEEEPFEQFVKRICLDDKLFTVAEEIGARLNVDP KKVLIWTRVSGSRFEPFFDDYMLNTCKGLMTRPVHDPRAYKRYRVQYAIMPFDIDEIS KHRIQTKLFWQLPNGHVEELTLFPLKEGTVIDIINEAKRYYPFVEGGSGKFRLLQIGA PPLSNQRVYQIYGENTLISDLDQRTMYKLVSSALHCRLEEVPIDELDMSPGEFLCPVV HFDREPTKLFGLSFVIKIRNNELMTEVRDRLRRKLNDVSDADFAKYKFALLSRDKLCR TIEFNNGEKVNLADMANQTTGVPQVYIGLDHKSPIQHSSEAAIRILN" ORIGIN 1 tataggaatc actctggttg ttttatcact aacttgtgtg gctgctgcga gagaacggat 61 aaacgaaaga ggcaaagacg ctagcagaca aagtgacccg tcagtctgat catgcagtgc 121 tcgccggatc ccgaagatct actcattgtg ccgacgcacg atataccatc ctatgatgaa 181 agtttggatc cattcgggcc agaaggccat ttgtccttgg acattgactg cttttcgaag 241 tttatgtctc gttcagacaa tcggattatg tccaagccaa ttatcgttcg tggcatccct 301 tggcgtattc tagccatttg cagaggttcc agaaatcaac aaggaagtcg gcattcgatg 361 aactctcgtg tcaaccgcag caattttaac ttcgggttct ttctgcagtg caacaatgat 421 gagttgctgc agaaacgtgg aatgtggcga tgctatggaa cggccgtttt ggaagttctt 481 aatgcggatg gtccatcgat tcagaaaaag attcatcatt catttcacaa tacggaggtt 541 gattggggat tttcaaatta tgaccagtat gacaccctgt gcaaccccaa agatggatac 601 gtagtgaatg acactatcaa attgagatgt cgtttcactg ctgatgttcc gactggagcc 661 aactatatgt gggatagcaa acggcacact ggttgcatcg gattaagaaa ccaaggagcc 721 acttgttaca tgaactccat attgcaatca ttctacttca ccacaggatt cagacgcgct 781 gtctacaaca tggatgtagg aacagagccg aatgagagca acattgtgct tgcaatgcag 841 agagttttct atgaactcca gatggctagt gaagctgtcg aaacgaacag tctcacgaga 901 gcttttggat gggataagct tgatgcgttc aatcaacatg atgttcaaga gttttgtcgt 961 gttcttcttg acaatctcga aacaaagatg aaaggaacat ccgaggagaa gtcaatccca 1021 aacttattca gaggaaacat gaagtcatat atcaaatgtc ttgatgtgga ctatgaaagt 1081 tcgcggactg aatcattcta cgacgtacag ctcaatgtac ttgggatgga tagcttggaa 1141 cgtgcattcg aagcttacac aacatcagaa atcctcgatg atgagaacaa gtatgatgct 1201 ggagaccacg gactacaaag agcggaaaag ggagtaaaat tcgtcgagct tccaccaatc 1261 ctgcacgttc agctcatgcg atttcaatat tgcggtgtcg aacaaaagat caacgaacgg 1321 ttctcatttc cggagaaaat gaacttggca tcttgttgcg agttaggacc aatgctcacc 1381 gaagaagact gtgtgtacag tctccacgcg gttcttgttc acagtggaga gttccatgga 1441 ggtcactatg tcacctatat caatgtcaat cttcacgaat cggccgtcga tccaacttca 1501 tctgctaaat ggtgcaagtt tgatgatgat gttgtttcta gaacaacaac agatgatgcc 1561 atcgtaagca atttcggagg agagaagaca atgaattctt cggcttatat gttggtctac 1621 gtccgtgata acgcgattga tcaattcctt gctccaatcc cagacagcca gataccacaa 1681 tctgtttctc gtacttttga aatggaaagg ctgcacagaa accgtgagaa gaaaaaattg 1741 gaggaagaac agctgtgtat ggggatagtt cttgtgacac cagatattgt tgcctctaat 1801 cattctttcg atcttgttga tcaatccata gtccatgaca gtattccaca cgagactgtt 1861 tggaagcata tgttcaccgc cgagctttat caatttgttc atgatagact tttcgagaag 1921 agcgcaatgc aaaaaattga tatgttcgat tcggatgatg aagctagaca ggcacggcgt 1981 gataatcttc gtcgcattaa atcgaaaaaa ttcaacttcc gtttgtggag aatgacagat 2041 tcatattcat tggaaagaac aactcagaaa ttgacttcaa gactgagacc atcggagttc 2101 atcgattgca aaactgatac acgccttgat accttgttga gccaagattt tgaaactatc 2161 tacgttgagt tctccaacaa tattgaacgc ccgctttgcg aatatgacac agcaagggac 2221 cttctatttt tcgtaaaata ttacgacaca atgaccgaca agtttactat catcggccat 2281 acaatgttcg actgtcacaa gcggtttaat ttgtacagat cgatgttatg tgaaatgatt 2341 gggctacccg ctgacacgga gttgaagtat tatatggagc atgctgcgag ttatctggaa 2401 ctggttgatc ttacccaaaa ttattcgatc ggaagactcg ttgaagagca agacggtggt 2461 attctagtag ttgagaaggt cgagacatct acatccacac aaaatgccaa gcagaagatg 2521 aatgaacttt tcctcgacgt agaagttgaa tttgttcaat cgttctacaa caaaaagccg 2581 gaggaagagc catttgaaca attcgtcaag agaatttgtc tggacgataa attattcact 2641 gtagcagagg aaattggtgc aagattgaat gtagacccaa agaaagtact catctggaca 2701 cgtgtgtctg gttctcgatt cgagccattt ttcgatgatt acatgttaaa cacatgcaaa 2761 ggacttatga caagaccggt acatgatccc agagcctaca agaggtatcg tgtacaatat 2821 gctatcatgc ccttcgatat tgatgaaatc agtaagcacc gtattcaaac caaacttttc 2881 tggcaacttc caaatggaca tgtagaagag ctaacactgt tcccattgaa agaaggaact 2941 gtcattgata ttattaacga ggcaaaacga tactatccat tcgtagaagg aggatcagga 3001 aaattcaggc ttctacaaat tggggctccc ccactcagta atcaacgtgt ttatcaaatt 3061 tacggagaaa acaccttgat tagtgatctt gatcaacgaa caatgtacaa attggtgagt 3121 tcagctctac attgccgcct tgaggaggtt ccgattgacg aattagatat gtcacctggc 3181 gagtttctat gcccagtcgt ccattttgat cgagaaccca caaaactttt cggactctca 3241 tttgttatca aaatacgtaa caatgagctg atgacagaag tacgggatcg tcttcgtagg 3301 aaattgaacg atgtctccga tgctgacttt gccaaataca agtttgcatt gcttagcaga 3361 gataaactct gtcgtaccat cgaattcaac aacggcgaga aagtcaacct ggcagatatg 3421 gcaaatcaaa caactggagt tccacaagtg tacattggtc tagatcacaa atcacccatc 3481 caacattcaa gtgaagctgc catccgaatc ttgaactgat tcaaacggtt gttatgatcg 3541 ccaagtttct ttcctctccc tgtgcaatct ctttctctct atttctctct ctctctcccc 3601 ctctctctct ctgtttgaac caatacgatc tggctgattc tatcgtttaa ttttataatc 3661 atccttatca ctattattat ttttaaatta catagctcta tcttcgggct catcttccac 3721 tattcctttc ttctaattca tcgcccattt tttctcgtca ttttcttgtg ttcctttttt 3781 gtttactagt ggctgttcac atctgtaagt tatttcccga atcccgaccc gttcaataaa 3841 aggtgctggc acctttcacc attcatgaag accgtgtcgt gttctcatta taagaatcct 3901 tcccatacaa caacattttt tctgtaaatg cttcaacatc attctactac acaccgtgta 3961 gaagtttgac tatgaaactc gtagaacttt tgtctccaat tttttaaata taaaattatg 4021 gaagattt //