Dbfetch
LOCUS NM_001307239 1229 bp mRNA linear INV 22-NOV-2023
DEFINITION Caenorhabditis elegans Shugoshin (sgo-1), mRNA.
ACCESSION NM_001307239
VERSION NM_001307239.2
DBLINK BioProject: PRJNA158
KEYWORDS RefSeq.
SOURCE Caenorhabditis elegans
ORGANISM Caenorhabditis elegans
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
Caenorhabditis.
REFERENCE 1 (bases 1 to 1229)
AUTHORS Sulson,J.E. and Waterston,R.
CONSRTM Caenorhabditis elegans Sequencing Consortium
TITLE Genome sequence of the nematode C. elegans: a platform for
investigating biology
JOURNAL Science 282 (5396), 2012-2018 (1998)
PUBMED 9851916
REMARK Erratum:[Science 1999 Jan 1;283(5398):35]
REFERENCE 2 (bases 1 to 1229)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1229)
AUTHORS WormBase.
CONSRTM WormBase Consortium
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics
Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org
REFERENCE 4 (bases 1 to 1229)
AUTHORS Sulson,J.E. and Waterston,R.
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger
Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute
at Washington University, St. Louis, MO 63110, USA
COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This
record is derived from an annotated genomic sequence (NC_003282).
On Sep 4, 2019 this sequence version replaced NM_001307239.1.
FEATURES Location/Qualifiers
source 1..1229
/organism="Caenorhabditis elegans"
/mol_type="mRNA"
/strain="Bristol N2"
/db_xref="taxon:6239"
/chromosome="IV"
gene 1..1229
/gene="sgo-1"
/locus_tag="CELE_C33H5.15"
/db_xref="GeneID:183189"
/db_xref="WormBase:WBGene00016381"
CDS 168..1097
/gene="sgo-1"
/locus_tag="CELE_C33H5.15"
/standard_name="C33H5.15b"
/note="Confirmed by transcript evidence"
/codon_start=1
/product="Shugoshin"
/protein_id="NP_001294168.1"
/db_xref="EnsemblGenomes-Gn:WBGene00016381"
/db_xref="EnsemblGenomes-Tr:C33H5.15b"
/db_xref="GeneID:183189"
/db_xref="InterPro:IPR011516"
/db_xref="UniProtKB/TrEMBL:W6SBE3"
/db_xref="WormBase:WBGene00016381"
/translation="MDAKTAQSIFGGIVAAKKRPSKEVPEPTINFKSANDSLVKKNLL
LKQQVVQCTKTIEKLRNENVALRQKNQELIDGTLEQRIELIVEQRLKFRLAHAAVLHK
KLVQNIQQTGLELDGLFKDLEPEPSGLNTRRPPKLELNLERVDEIPFCQSSMQGEIDE
NEIRFDNNSSQSTSSIQNAVNGTPRKKQSVGKGRRSELFQSFNADSSIVEEASTIPTN
RRAPMLIAPSSTPAGPSKPTARKPPTPRFKKPSTPALAPQSDDTELSSTIQVRRQRSA
KMNIKSLKEPSGKDKLRRPGKHDEPMPYINTFF"
ORIGIN
1 cgctcgcctt caattcattt gtactctcat aacttacatt ctatcttcta tcaaaacctt
61 gtcgtcagtc tcggtgtgtg gtccgtggtc attgtgaaag cggcgaacgt ttgaattgtt
121 catcaccctg tggcaaaact gtatcgattg gtgaagattt attataaatg gatgcaaaaa
181 ctgcacaatc tatttttgga ggaattgtag cagcaaaaaa acgaccatct aaagaagtcc
241 ctgaaccaac aataaatttc aagagcgcca acgattctct tgttaagaag aatcttctgc
301 taaaacaaca agttgtacaa tgcacaaaga ctattgaaaa actacgaaat gaaaatgtcg
361 ccttacgaca aaaaaatcaa gagctcatcg atggaactct tgagcagcga attgagctaa
421 ttgtcgagca aaggttgaaa tttcgcctgg cacatgctgc agttttacat aaaaaattag
481 tacagaatat tcaacagaca ggattggaat tagatggact tttcaaagat ttggaacctg
541 aaccgagtgg cttaaatacg cgacggccac caaaattaga gttaaatttg gaaagagttg
601 acgaaatacc attttgtcag tcttctatgc aaggagaaat tgatgaaaat gaaattcgat
661 ttgataataa ttcatctcaa agtacgtctt caattcaaaa cgctgtaaat ggaactcctc
721 gaaaaaaaca aagcgtcgga aagggtcgaa gaagtgagct gttccaaagt tttaacgctg
781 attcatctat tgtcgaagaa gcatctacaa ttccaacaaa tcggcgtgca cctatgctca
841 ttgctccatc atcaactcct gcaggccctt ctaagccaac ggctaggaaa cctccaacac
901 caagattcaa aaagccatca actcccgccc ttgcaccaca atcagatgac accgaactat
961 catcaacgat tcaggttcgt cgtcaacgat ctgcgaaaat gaatatcaaa tcattgaaag
1021 aaccaagtgg aaaagacaaa ctccgtcgac ctggaaagca tgatgaacca atgccataca
1081 tcaatacatt tttctgacca atttcattga agatctaagt caccgccatt atatatttat
1141 tttctgaaat atcattttaa tcacacatta ttgttttgct tgcattgtct gaaaattaag
1201 taaacttgtc aatagaatta tgtttttcc
//