Dbfetch
LOCUS NM_001307239 1229 bp mRNA linear INV 22-NOV-2023 DEFINITION Caenorhabditis elegans Shugoshin (sgo-1), mRNA. ACCESSION NM_001307239 VERSION NM_001307239.2 DBLINK BioProject: PRJNA158 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 1229) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 1229) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 1229) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 1229) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003282). On Sep 4, 2019 this sequence version replaced NM_001307239.1. FEATURES Location/Qualifiers source 1..1229 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="IV" gene 1..1229 /gene="sgo-1" /locus_tag="CELE_C33H5.15" /db_xref="GeneID:183189" /db_xref="WormBase:WBGene00016381" CDS 168..1097 /gene="sgo-1" /locus_tag="CELE_C33H5.15" /standard_name="C33H5.15b" /note="Confirmed by transcript evidence" /codon_start=1 /product="Shugoshin" /protein_id="NP_001294168.1" /db_xref="EnsemblGenomes-Gn:WBGene00016381" /db_xref="EnsemblGenomes-Tr:C33H5.15b" /db_xref="GeneID:183189" /db_xref="InterPro:IPR011516" /db_xref="UniProtKB/TrEMBL:W6SBE3" /db_xref="WormBase:WBGene00016381" /translation="MDAKTAQSIFGGIVAAKKRPSKEVPEPTINFKSANDSLVKKNLL LKQQVVQCTKTIEKLRNENVALRQKNQELIDGTLEQRIELIVEQRLKFRLAHAAVLHK KLVQNIQQTGLELDGLFKDLEPEPSGLNTRRPPKLELNLERVDEIPFCQSSMQGEIDE NEIRFDNNSSQSTSSIQNAVNGTPRKKQSVGKGRRSELFQSFNADSSIVEEASTIPTN RRAPMLIAPSSTPAGPSKPTARKPPTPRFKKPSTPALAPQSDDTELSSTIQVRRQRSA KMNIKSLKEPSGKDKLRRPGKHDEPMPYINTFF" ORIGIN 1 cgctcgcctt caattcattt gtactctcat aacttacatt ctatcttcta tcaaaacctt 61 gtcgtcagtc tcggtgtgtg gtccgtggtc attgtgaaag cggcgaacgt ttgaattgtt 121 catcaccctg tggcaaaact gtatcgattg gtgaagattt attataaatg gatgcaaaaa 181 ctgcacaatc tatttttgga ggaattgtag cagcaaaaaa acgaccatct aaagaagtcc 241 ctgaaccaac aataaatttc aagagcgcca acgattctct tgttaagaag aatcttctgc 301 taaaacaaca agttgtacaa tgcacaaaga ctattgaaaa actacgaaat gaaaatgtcg 361 ccttacgaca aaaaaatcaa gagctcatcg atggaactct tgagcagcga attgagctaa 421 ttgtcgagca aaggttgaaa tttcgcctgg cacatgctgc agttttacat aaaaaattag 481 tacagaatat tcaacagaca ggattggaat tagatggact tttcaaagat ttggaacctg 541 aaccgagtgg cttaaatacg cgacggccac caaaattaga gttaaatttg gaaagagttg 601 acgaaatacc attttgtcag tcttctatgc aaggagaaat tgatgaaaat gaaattcgat 661 ttgataataa ttcatctcaa agtacgtctt caattcaaaa cgctgtaaat ggaactcctc 721 gaaaaaaaca aagcgtcgga aagggtcgaa gaagtgagct gttccaaagt tttaacgctg 781 attcatctat tgtcgaagaa gcatctacaa ttccaacaaa tcggcgtgca cctatgctca 841 ttgctccatc atcaactcct gcaggccctt ctaagccaac ggctaggaaa cctccaacac 901 caagattcaa aaagccatca actcccgccc ttgcaccaca atcagatgac accgaactat 961 catcaacgat tcaggttcgt cgtcaacgat ctgcgaaaat gaatatcaaa tcattgaaag 1021 aaccaagtgg aaaagacaaa ctccgtcgac ctggaaagca tgatgaacca atgccataca 1081 tcaatacatt tttctgacca atttcattga agatctaagt caccgccatt atatatttat 1141 tttctgaaat atcattttaa tcacacatta ttgttttgct tgcattgtct gaaaattaag 1201 taaacttgtc aatagaatta tgtttttcc //