Dbfetch
LOCUS NM_001306891 5550 bp mRNA linear INV 22-NOV-2023 DEFINITION Caenorhabditis elegans Ion transport domain-containing protein (unc-77), partial mRNA. ACCESSION NM_001306891 VERSION NM_001306891.3 DBLINK BioProject: PRJNA158 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 5550) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 5550) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 5550) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 5550) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003282). On Apr 15, 2020 this sequence version replaced NM_001306891.2. COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..5550 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="IV" gene <1..>5550 /gene="unc-77" /locus_tag="CELE_C11D2.6" /db_xref="GeneID:177379" /db_xref="WormBase:WBGene00006809" CDS 1..5550 /gene="unc-77" /locus_tag="CELE_C11D2.6" /standard_name="C11D2.6i" /note="Confirmed by transcript evidence" /codon_start=1 /product="Ion transport domain-containing protein" /protein_id="NP_001293820.1" /db_xref="GeneID:177379" /db_xref="GOA:V6CLY7" /db_xref="InterPro:IPR005821" /db_xref="InterPro:IPR027359" /db_xref="InterPro:IPR028823" /db_xref="UniProtKB/TrEMBL:V6CLY7" /db_xref="WormBase:WBGene00006809" /translation="MSAPTRLLVAKAAVLSSAMLARKNSSSRGAPGSAAGFGARESIA AISDMLSSQHKKPVRSSYVESDRVEWALKIACTISMITVCIHTPRTIELFQPLNYIIL AADFISVSIFMLDSVLRIHYEGIFRCDSSYLSNRWSQFSVFISIIHLLSFLLHCYQLI DNFFPFLHLNYRAWYGAIRSIRPFIIIRLIPLVVKFKLPKNRIEQLLKRSSQQVKNVT LFFVFFMTLYAIFGIQLFGRMDYHCVQPKTDPNNVTIMDLAIPDTMCAPEGIGGYECP APMVCMQLNLNAKGEGFYGMFNDFGASVFTVYLAASEEGWVYVLYDCMDSLPSYLAFL YFCTLIFFLAWLVKNVFIAVITETFAEIRVQFSEMWQKKEVTLDEGFRKKLEKTDDGW RLIRLDGEVEPEGPKQKLQWMLRSMYFQCFVIIFVVINAIGNAMFVYRHDETDKPRKY NFYLFEVGFTILFNVECIIKILCYGFRNFIRRGIFKFELILCLGSSLNCVKFFYERNY FTYFQTFRLLRLIKASPILEDFVWKIFSPGKKLGGLVIFTIAFICCYSAISLQLFYSV PNLHHFRTFPQAFMSMFQIITQEGWTDFVVEVLRATDDNLVPLVALYFVAYHLFVTLI VLSLFVAVILDNLEMDEELKKVKQLRAREATTSMRSTLPWRLRVFEKFPTRPQMAAMR KADSDFPMPKVRGSFTHQFAVDHSLETTDVIESDFEFPKRIMKSAGKRKISKSGLTFR QIGSTSLRCSLNNLLEMSDRTRQSLSNSLSFLPHFTRSSGSLYPRKDALPKSRSMTGK FLQTAVRNKQFNMYSENGDLSRPSDSAPKKNAKQGEIDIRALQQKRQLAEITRNRIEE DMRENHPFFDRPLFLVGRASQLREFCKKMVHSKYDSQDDGTNGGAKTKKRFKEIRALI GIMPYIDWAMATVTIVSCISMLFESPWPTTGENLVMNNGYLQISDYFFVLSMTFELCV KIIANGLFFTPKAVVRDVGGVMNLFIYFTSVIFLAWMPKHVEINSLAQFLMICRAMRP LRIYTLVPHIRRVVLEFFRGFKEILLVTILMIVVMFIFASFGVQIVGGKLAACNDPTV SSRENCTGVFWQKLFVTRLEVYGKDTEAMHPKIMVPRVWTNPRNFNFDHVGNAMLALF ETLSFKGWNVIRDILWSRHGPWAVVFIHIYVFIGCMIGLTLFVGVVIANYTQNRGTAL LTVDQRRWHDLKARLKMAQPLHVPPKPSESARLRTKLYDLTMSRWFNQAFALLVVLNS FTLVIPWNVEEEEQRATYVFTVTALAAFMNMLFVIEIILKVIAYTFSGFWQSRRNRVD LLITVFGVIWIFLHFFVALPSSKIDVDVQVELKKFTYTFGYLVVILRFFTIASRNSTL KMLMLTVIMSMFRSFFIITALFLLVLFYAYTGVILFPMVKYGMAVSKHVNFRTASEAL VVLFRCLTGEDWNDIMHDCMRSAPFCYWNEGMNYWETDCGNFYGAIIYFCSFYLIITY IVRNLLVAVIMENFSLFYSSEEDALLSYADIRNFQYVWNMVDQEQKRTIPVERVKFLL RLLKGRLEVDPEKDRILFKHMCYEMERLHNGEEVSFHDVLYMLSYRSVDIRKSLQLEE LLQREELEFIIEEEVAKQTIRTWLEGCLRKMRNPSQKDAEGVLPFGGGHPVIHSSGHS SISHEETVAQRLRFENIRGDSVDTEETESSEEETPPPIRKKAAVKNRRGSIPDVLSRT GLFQEAARKFMVGSSSEKKQVKSRSPETVQLLPKRANSEIRKGSGQPKNFHLQLNVYD LPDVEERGEDSPFSPKNLSDDFNGEHSPLVITPSLPVPPTHGSPRPLMPCETTKDIEK WWNSLVD" ORIGIN 1 atgtccgcgc ctaccaggct actggtggcc aaagcggcgg tcctgtcgtc tgcgatgctg 61 gcgcgtaaga actcatcatc gcgtggagca ccgggctcag ccgcagggtt cggtgctcgg 121 gagagcattg cagccatatc agatatgctc agttcacaac acaagaaacc agtcaggagc 181 agttacgtgg aaagtgaccg agtggaatgg gctctcaaaa tagcatgtac aatatctatg 241 attactgtct gcattcacac tccacgaacg atcgaactgt ttcagccact gaactatata 301 atactggcgg ccgactttat atcagtatca atttttatgc tggattcagt gttacgaatc 361 cattatgaag gcatttttcg atgcgattcc tcatatttat caaatcgctg gtcacaattt 421 tctgtcttca tctcgatcat acatttactc tcgtttcttc ttcattgtta tcaacttatt 481 gacaattttt ttccatttct acatcttaac taccgtgcct ggtacggtgc gattcggtcg 541 attcgaccgt ttattataat cagattgata ccgttagtag tcaaattcaa gttaccaaag 601 aataggattg agcagttgtt aaaacgatca tcccaacaag tgaagaatgt tacattgttt 661 tttgtatttt tcatgacatt atatgcaatt tttggaattc aattgtttgg gagaatggac 721 tatcattgtg ttcagccaaa aaccgatccg aataatgtga caataatgga tctggcgatt 781 cctgatacaa tgtgtgctcc agaaggaatt ggaggttacg aatgtcctgc tccaatggtt 841 tgtatgcaat tgaatttaaa tgccaaagga gaaggattct atggaatgtt caatgatttt 901 ggagcaagtg tgttcactgt atatctagca gcttctgaag aaggatgggt atatgttctg 961 tatgattgta tggactcact tccttcgtat ttggcatttc tctatttttg tacactgata 1021 ttcttcttgg cttggcttgt caaaaatgtt ttcattgctg taatcactga aacatttgct 1081 gaaattcgag tccagttcag tgaaatgtgg cagaaaaagg aggttacgtt ggatgaagga 1141 tttcggaaga aattagaaaa aactgatgat ggatggagat tgataagatt ggatggagaa 1201 gttgaaccag aaggaccaaa gcagaaatta caatggatgc ttcgaagtat gtatttccaa 1261 tgttttgtga taatattcgt ggtcatcaat gcaattggaa atgcaatgtt tgtctaccgt 1321 catgatgaaa cagataaacc aagaaaatat aatttttatc ttttcgaagt tggattcaca 1381 atacttttca atgttgaatg tatcatcaag attctttgct atggatttcg aaattttatt 1441 cgaagaggaa tattcaaatt cgagctgatt ttatgtctag gaagctcgct gaattgtgtg 1501 aaatttttct acgaacgaaa ttatttcaca tattttcaaa catttcgtct tttgagacta 1561 atcaaagcgt cgccgattct cgaagacttt gtgtggaaga ttttcagtcc tgggaagaaa 1621 ttaggaggtc tcgtgatttt cacaattgca ttcatttgct gttactctgc aatttctctt 1681 caacttttct attcggtgcc gaatcttcat cactttcgga cctttccgca ggcgttcatg 1741 tcaatgtttc aaatcataac acaagaagga tggacagatt ttgtggttga agttttgaga 1801 gcaactgacg ataatttggt acctcttgtg gctctctatt ttgtcgcata ccatcttttt 1861 gtcactttga ttgtgctctc cctgttcgtt gccgtaattc ttgataactt ggaaatggac 1921 gaagagctca aaaaagtgaa gcaactaaga gcacgagaag caactacttc gatgagatca 1981 acacttccat ggagacttcg agtttttgag aaattcccga caagaccaca aatggcggca 2041 atgagaaaag ccgacagtga ctttccaatg ccaaaagttc gaggaagctt cacacatcaa 2101 tttgcggtag atcatagctt agaaaccaca gatgtcattg aatccgattt cgaatttcca 2161 aagcgcataa tgaagtcggc tggtaaacga aaaatctcaa aaagtggtct aacattccgt 2221 caaattggct caacatctct tcgttgcagt ttaaataatc ttcttgaaat gtccgatcgc 2281 actcgtcaat cgttgtctaa ttcgttatct tttttgccac atttcacacg ttcttcggga 2341 agtttgtatc cgcggaaaga cgctctaccg aaatctcgct cgatgactgg aaagtttttg 2401 caaaccgctg tgagaaacaa gcaattcaac atgtatagtg agaatgggga cctctcaaga 2461 ccatctgatt cagctccaaa aaagaacgcg aaacagggag aaatcgatat tagagcattg 2521 cagcagaaga gacaattggc ggagattact agaaaccgaa ttgaagagga catgagagaa 2581 aaccatccat ttttcgatcg acctcttttt cttgttggcc gagcttctca actacgggaa 2641 ttttgtaaaa agatggtaca ttccaaatat gatagtcagg atgatgggac aaatggaggt 2701 gcaaaaacaa agaaaagatt caaagaaatt cgagctttaa ttggaattat gccgtatatt 2761 gattgggcaa tggccactgt tacaattgtt tcttgtattt caatgttatt tgaaagtccg 2821 tggccgacaa ctggagagaa tttagtgatg aataatggat atttgcagat cagtgactac 2881 ttttttgttt tgtcaatgac atttgaatta tgcgtgaaaa tcattgcaaa tggtctgttt 2941 ttcactccaa aagccgttgt tcgagatgtc ggaggagtca tgaatttatt catttatttt 3001 acatctgtaa tatttctggc ttggatgcca aaacacgttg aaatcaacag tttggcgcag 3061 tttttgatga tttgtagagc aatgcggccg ttgagaatct acactctggt cccccacatt 3121 cgtcgtgtag ttctcgaatt ctttcgtgga tttaaagaaa tccttttggt aaccatattg 3181 atgatagtcg tcatgtttat ttttgcaagt tttggagttc aaattgttgg aggaaagctg 3241 gctgcatgta atgatccgac tgtttcatca agagaaaact gtactggtgt cttctggcag 3301 aagctcttcg taactcgcct ggaagtttat ggaaaagaca cagaagcaat gcatccaaaa 3361 ataatggtgc caagagtttg gacaaaccct cgaaatttca actttgatca tgtcggaaac 3421 gcaatgttgg ctctttttga aacgttaagc ttcaaaggat ggaatgtgat tcgagatatt 3481 ttatggagta gacatggacc atgggctgtt gtatttattc atatttatgt atttattgga 3541 tgtatgattg gattgacact tttcgttggc gtcgtcattg cgaattacac tcaaaatcga 3601 ggaacagctc ttttaacagt tgaccaaaga agatggcatg atctaaaagc caggctgaaa 3661 atggctcagc cacttcacgt tccaccgaaa ccatctgaat cggcacgtct tcgaacgaaa 3721 ctttatgatt taacaatgag tagatggttt aatcaagcat ttgcattact tgttgtttta 3781 aattcattca ctctagtaat tccatggaat gttgaagaag aagaacaaag agcaacatat 3841 gtattcactg taactgcttt agcagcattt atgaatatgt tatttgttat cgagattatt 3901 ttaaaagtca ttgcatacac tttctctgga ttttggcaat cacgaagaaa tcgagtggat 3961 ttattgatca cagttttcgg agttatttgg atttttcttc acttttttgt ggctcttccg 4021 tcatcgaaaa tcgatgttga tgttcaagtg gagttgaaga aattcactta tacatttgga 4081 tatctcgtcg ttattttgag atttttcact attgcaagcc gaaattcgac gctaaaaatg 4141 ttgatgttaa ctgtaattat gtcaatgttt cgatcattct tcattatcac tgctctcttt 4201 cttttggtct tattctacgc gtacactgga gtcattttgt ttccaatggt taaatatgga 4261 atggcagtta gcaaacacgt aaacttccga actgcatcag aagcattggt cgttttgttt 4321 cgatgtttaa ctggagagga ttggaatgat attatgcatg attgtatgag aagcgcccca 4381 ttctgttatt ggaatgaagg aatgaattat tgggagactg attgtggaaa tttctatgga 4441 gcaatcatct acttttgctc tttttatctc atcatcacgt atattgtcag aaatcttctt 4501 gttgccgtca tcatggaaaa cttctcatta ttctactcat ccgaagaaga tgctcttctc 4561 agttatgcag atattcgaaa ttttcaatat gtttggaata tggttgatca agaacaaaaa 4621 cgaacaattc cagtagaaag agtaaagttt ctattgagat tattgaaagg aagacttgaa 4681 gttgacccgg aaaaagatcg gattttgttc aagcatatgt gctacgaaat ggaacggttg 4741 cataatggag aggaagtttc atttcacgat gttctctata tgctatccta tcgatcagtt 4801 gatattcgaa aatctttgca acttgaagaa ttgttacaaa gagaagaact cgagtttata 4861 attgaagaag aagtcgcaaa acaaacaatc agaacatggc tggaaggatg tcttcgtaaa 4921 atgagaaatc caagtcaaaa agatgcagaa ggagtacttc catttggtgg aggacatccg 4981 gttattcatt catcaggaca ttcttcaatt tcacatgagg aaactgttgc acaaagactt 5041 cgatttgaaa atattcgagg agatagtgtt gatacagaag agacggagag tagtgaagaa 5101 gaaactccac ctccaataag gaagaaggct gctgttaaga atcgaagagg aagtattcca 5161 gatgttcttt cgagaactgg tctctttcaa gaagctgctc gaaagttcat ggttggtagc 5221 tcgagtgaga aaaaacaagt caagtcgcga tcgcctgaaa ccgtccagtt gcttccgaaa 5281 cgagctaatt ctgaaatccg aaagggttcc ggacagccaa agaattttca tctccagcta 5341 aacgtctatg atctacctga cgtagaagaa cgtggagaag attctccatt ttctcccaaa 5401 aacttgtctg atgattttaa tggagagcat tcaccattgg tgataactcc atccttgcct 5461 gtaccaccga cacatggaag ccctcgacca cttatgccat gtgaaacgac aaaagatatt 5521 gaaaaatggt ggaattccct tgttgattag //