Dbfetch
LOCUS NM_001270189 3774 bp mRNA linear INV 22-NOV-2023 DEFINITION Caenorhabditis elegans P-GlycoProtein related (pgp-6), partial mRNA. ACCESSION NM_001270189 VERSION NM_001270189.3 DBLINK BioProject: PRJNA158 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 3774) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 3774) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 3774) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 3774) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003284). On Apr 15, 2020 this sequence version replaced NM_001270189.2. COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..3774 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="X" gene <1..>3774 /gene="pgp-6" /locus_tag="CELE_T21E8.1" /db_xref="GeneID:181278" /db_xref="WormBase:WBGene00004000" CDS 1..3774 /gene="pgp-6" /locus_tag="CELE_T21E8.1" /standard_name="T21E8.1c" /note="Product from WormBase gene class pgp; Confirmed by transcript evidence" /codon_start=1 /product="P-GlycoProtein related" /protein_id="NP_001257118.1" /db_xref="EnsemblGenomes-Gn:WBGene00004000" /db_xref="EnsemblGenomes-Tr:T21E8.1c" /db_xref="GeneID:181278" /db_xref="GOA:G1K0X0" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR011527" /db_xref="InterPro:IPR017871" /db_xref="InterPro:IPR027417" /db_xref="InterPro:IPR036640" /db_xref="InterPro:IPR039421" /db_xref="UniProtKB/TrEMBL:G1K0X0" /db_xref="WormBase:WBGene00004000" /translation="MDNTPLLPQSDEKKPSQICSFIRVVFKCSSCFEKFLFLLGVLFS LMTGFCQPFMSYTFGEVSQVLVTITNAINNKTIDPADLEKAYEEYERGMNQVVFHFFL CGCAYFIFASLQHAIMKYVGDNTTYRVRKQYISRLLKKDAQYFDSVSTGHLSTVLNDN LERFREVFNEKIALIIAFVTDFTLGTALAFYTDWRLASYGIFFSLGIAFSGFINSAGV MKTTGKQNTHYANAGSIAFQTLGAYKTVCSLNGQKTEIERYTEELKAGEKYGIRRALM YSISRGVTYFFCNSLNTVVLYVGATMIYSGTLETAVVVRLFHYMLFGAFCLSEALPHI SRLAGAISSTAPIAEMLIKDDNVIEKDETDYDVEVEVNGNISFKNVKFSYPTRPDAQV LKGISFDVQNGECIALVGASGSGKSTVVQLLLHYYNIDSGNIFIDGMDLNDMNIKRLR RVIGVVSQEPVLFNTTIEENIRFGNPNVSLPEIYGALRKANAYDFVCSFPKGIKTIVG ERGTQLSGGQKQRIAIARTLVRNPKILLLDEATSALDNESEQVVQKALENASQGRTTI VVAHRLSTIRNASKIIVMQKGEIVEVGNHDELIAKRGVYNDLVQAQLLESHDDHEELP PLAARQLSQELSPLHSYAIQRSTSNDAGVHDDDMERILDELSKEGAKKSNLREIVKQC RPDYCFLFIAVFGSAIQGVSYPILAQLIVRTYEGFAMIGEDMLYYSHLWALSFMFLAV FRPLTLYCQYYYFGKVSEQLSTRLRIKSFSHMLSLPCAFYDDPNHSATRLSNRLNTDS SNVKAAVDDRLGCVIMTVVAISIAITTASLYCWKMTLEVLMFFPLLYLAEYCYEAATE TAIQEDTIAFENSNRTAIEALENVRTVRALNLEDKIMSLISEHLQKIHKSYFKRAIIQ GAANGLSLSCFLFVYSVSFKFGTYLALRKEVAPMDTYLVLMTLSMTANMAGSAAAYLP DYKKAVHAAGLIFHLFTYPATMPFSSSDGKKNIEKGEIIGENVQFHYDQRPDRMILNG VNLKVDPGKTLALVGPSGCGKSTIISLLERFYHAVDGEVKIDSENVEDINLNHLRSNL ALVSQEPTLFNCSIRENLLYGLTRSVPQLELEKALQTANAFNFVFQFPQGLDTLVGER GAQLSGGQKQRIAIARAILRNPKVLLLDEATSALDSDSEKVVQNALDTASERLSTVVV AHRLSTVVNADSIAVLKNGKVAEQGTHEELLRKRSIYWRLVQKQGIQVETPSD" ORIGIN 1 atggacaata ctcctctctt gcctcaatca gatgaaaaga aaccatcaca gatatgcagt 61 tttattcgtg ttgtttttaa atgctcatca tgtttcgaaa agtttttgtt tctacttgga 121 gtgcttttct ctttgatgac gggtttttgc caaccgttta tgagctacac atttggagaa 181 gtttctcaag tcctggtaac aataacaaat gcaattaaca acaaaactat tgaccctgcc 241 gatctcgaaa aagcatatga agagtatgag cgcggaatga accaggtcgt ctttcatttc 301 tttttatgcg gatgcgcgta ttttattttt gcatctctac agcacgctat catgaaatac 361 gttggagaca acacgacata tcgcgttcga aaacaatata tatcacgctt attaaaaaaa 421 gatgctcagt attttgatag cgtgtcgact ggacatttgt ccactgtatt aaatgacaac 481 ttggaacgtt tccgagaagt atttaatgag aaaattgcac tcataatcgc atttgttact 541 gattttacac ttggaactgc attagcattt tatacagatt ggcgtctggc ttcgtatgga 601 atcttttttt cacttggaat tgcattttct gggtttataa actcagcagg tgtaatgaag 661 acaactggaa aacagaacac gcattatgct aacgctgggt ccatagcctt ccagacactt 721 ggtgcataca aaacagtttg ttctttgaat ggccagaaaa ctgagattga aagatataca 781 gaagaactga aggctggaga aaaatatggt attcgtagag ctcttatgta ctccatttcg 841 agaggtgtca cttacttttt ctgtaacagc ttgaacactg ttgttctcta tgttggagca 901 actatgattt attctggtac actggaaaca gcggtcgttg ttaggctttt ccactatatg 961 ttgtttggag ccttctgtct tagtgaagca ctgcctcata tctcccgcct agctggtgca 1021 atttcttcca cagcacccat tgcagagatg ctgattaaag atgacaacgt tatcgaaaaa 1081 gacgagacag actacgacgt ggaagtggaa gttaatggaa atatttcttt caaaaatgta 1141 aaattctcgt acccaactcg accagatgca caagttttga aaggaatctc gtttgatgtt 1201 caaaatggag aatgtatcgc tttagttggt gctagtggaa gtggtaaaag tactgtagtg 1261 cagttactcc ttcattacta caatattgat tctggaaata tatttattga tggaatggat 1321 ttgaacgata tgaatatcaa aagacttcgt cgagtgattg gagtcgtttc ccaagaacca 1381 gtacttttta atactacgat agaggaaaat attagatttg gaaacccaaa tgtgtcttta 1441 ccggaaatct atggagcctt aagaaaagca aatgcttatg attttgtgtg ctcttttcca 1501 aaagggatca aaacaatagt tggcgagaga ggtacacagc tttctggagg acaaaagcaa 1561 agaatcgcaa ttgcacgaac gttggttcga aatccaaaaa ttcttcttct cgatgaggca 1621 accagtgcat tggataatga aagtgagcaa gttgtacaga aagcacttga aaacgcgtcg 1681 caaggaagaa caactatagt tgtggcacat cgattatcaa caatcagaaa tgccagtaaa 1741 attattgtga tgcaaaaagg agagattgtt gaagttggga atcatgatga gctaattgcg 1801 aaacgaggtg tgtacaatga tctagttcaa gcccaattgt tagaatctca cgatgaccat 1861 gaagagcttc caccacttgc tgcaagacaa ctatcacaag agttatcacc attacatagt 1921 tatgcaattc aaagaagtac aagtaatgac gcaggtgttc atgacgatga tatggaacga 1981 atattagatg aactcagcaa agaaggagca aagaaatcaa atctcagaga aattgtgaag 2041 caatgtcgac cagactactg tttcttattt attgcagttt ttggaagtgc catacaagga 2101 gttagctatc ctatactggc tcaattgata gtacgaacat atgaagggtt cgcgatgatt 2161 ggtgaagaca tgctctacta cagtcacctt tgggcgctat ctttcatgtt tctggctgtg 2221 ttccgtccac ttacattata ttgtcaatat tactactttg gaaaagtttc tgaacaatta 2281 tccacacgac tccgcatcaa gtcgttcagt catatgttgt cacttccatg cgcattttac 2341 gatgatccca atcactctgc aactcgattg tctaacagat tgaatacgga ttcttctaat 2401 gtcaaggcag cagtagatga tcggctggga tgtgtcatca tgactgtggt agcaatttca 2461 atcgcaatta caactgcttc cttgtactgt tggaaaatga ctctagaggt attgatgttt 2521 ttcccattgt tgtacctggc tgaatattgt tacgaagcag ccaccgaaac cgctatccaa 2581 gaagatacaa tcgcctttga aaatagtaac agaactgcga ttgaagcgtt ggaaaatgtg 2641 agaacagttc gagcacttaa tttggaagat aaaataatgt ctttaatatc tgaacatcta 2701 caaaaaattc acaaatctta tttcaaaaga gccattattc aaggtgctgc aaacggtctc 2761 tctcttagtt gtttcttgtt tgtgtactcg gtttctttca aatttggaac atatttagct 2821 ttacggaaag aagtagctcc aatggatact tatcttgttt taatgactct ttccatgaca 2881 gctaatatgg ctggatctgc agctgcatat ctcccagatt acaaaaaagc agttcatgca 2941 gctggattaa tattccattt gttcacatat ccagctacga tgccattcag ttccagtgat 3001 ggaaagaaaa atattgaaaa gggagaaatt attggagaga atgttcaatt tcattatgat 3061 caacggccgg atcgtatgat attgaatggt gttaatctga aagtagaccc aggaaaaacc 3121 cttgctcttg ttggtccaag tggttgtgga aagtcgacaa tcatttcatt gctagagagg 3181 ttctatcacg cagttgatgg agaagtcaaa attgacagcg aaaacgtcga ggatatcaat 3241 ttgaaccacc ttcgatctaa tttagctctg gtatcacaag agccaactct gttcaactgt 3301 tcaatcagag agaacctttt gtatgggctc acaagatccg tgccacagtt agaacttgaa 3361 aaggctttgc aaacggcaaa tgcgttcaac tttgtatttc agttcccaca gggtctggac 3421 acacttgttg gtgaacgtgg agctcagtta tccggtggtc aaaaacaaag gattgcgatt 3481 gctcgagcaa tcctgagaaa tccaaaagtt cttctattgg atgaagcgac tagtgctctg 3541 gacagtgaca gtgaaaaagt agttcaaaat gctcttgaca ctgcaagtga gagactatcc 3601 actgttgttg ttgcacatcg gctatcaaca gtagtcaatg cagattccat tgctgttctg 3661 aaaaacggaa aagttgcaga acaaggaaca catgaagaac tattaaggaa aagaagtata 3721 tactggagac ttgtacaaaa acaaggaatt caagtggaga caccatccga ttaa //