Dbfetch
LOCUS NM_001268315 3576 bp mRNA linear INV 22-NOV-2023 DEFINITION Caenorhabditis elegans Calcium-transporting ATPase (mca-3), partial mRNA. ACCESSION NM_001268315 VERSION NM_001268315.4 DBLINK BioProject: PRJNA158 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 3576) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 3576) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 3576) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 3576) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003282). On Feb 2, 2021 this sequence version replaced NM_001268315.3. COMPLETENESS: incomplete on the 3' end. FEATURES Location/Qualifiers source 1..3576 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="IV" gene 1..>3576 /gene="mca-3" /locus_tag="CELE_Y67D8C.10" /db_xref="GeneID:177089" /db_xref="WormBase:WBGene00003153" CDS 64..3576 /gene="mca-3" /locus_tag="CELE_Y67D8C.10" /standard_name="Y67D8C.10d" /note="Partially confirmed by transcript evidence" /codon_start=1 /product="Calcium-transporting ATPase" /protein_id="NP_001255244.1" /db_xref="EnsemblGenomes-Gn:WBGene00003153" /db_xref="EnsemblGenomes-Tr:Y67D8C.10d.1" /db_xref="EnsemblGenomes-Tr:Y67D8C.10d.2" /db_xref="EnsemblGenomes-Tr:Y67D8C.10d.3" /db_xref="EnsemblGenomes-Tr:Y67D8C.10d.4" /db_xref="GeneID:177089" /db_xref="GOA:B7CED8" /db_xref="InterPro:IPR001757" /db_xref="InterPro:IPR004014" /db_xref="InterPro:IPR006068" /db_xref="InterPro:IPR006408" /db_xref="InterPro:IPR008250" /db_xref="InterPro:IPR018303" /db_xref="InterPro:IPR022141" /db_xref="InterPro:IPR023214" /db_xref="InterPro:IPR023298" /db_xref="InterPro:IPR023299" /db_xref="InterPro:IPR036412" /db_xref="UniProtKB/TrEMBL:B7CED8" /db_xref="WormBase:WBGene00003153" /translation="MPEYGASLEELRALMEYRSAEAKEKIETDYGGTTGLCERLKTDP NNGLPNNEEELERRRNVFGANEIPPHPPKCFLQLVWEALQDVTLVILLVSAIVSLALS FYRPPGEDTAGSDDSEHDAGWIEGVAILISVIVVVLVTALNDYTKERQFRGLQAKIET EHRFFVLRGGQSVQVVVNELVVGDIAQIKYGDLIPSDGIIIQSNDLKMDESSLTGESD QIRKSPEHDPIILSGTHVMEGSGKMLVTAVGVNSQTGIIMTLLGAAKTVAEEERKTAK REERRSRSSVKSHHHHHHHHHREHRDSHHQAQNQNGGDGASGAEEGTAQALLDSKGDE AMANGKAVAAAESDGKKERSVLQAKLTRLAIQIGYAGSFVAGCTVLILIIRFCISRYA IDGKSFSLADFQHFINFLIIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMLDNNLVRHL DACETMGNATAICSDKTGTLTTNRMTVVQSFVNDVHYKDTPKIESLDQNTAKLMMDCI SINSSYSSQVIPPKQLGEQATQLGNKTECGMLGFVLALGKSYQEIRDRHPEETIPKVY TFNSVRKSMSTVINLPDGGYRVFSKGASEIVTKRCKYFLGKNGTLTKFSSKDAENLVR DVIEPMASDGLRTICVAYKDYVPSSKKTADNQIAYSSEPDWENEEMIVGDMTAIAVLG IQDPVRPEVPAAITRCQEAGITVRMVTGDNINTARSIATACGILKPGEDFIALEGKEF NARIRDENGEVSQEKLDLIWPKLRVLARAQPSDKYVLVKGIIDSRVTDSREVVAVTGD GTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSIAKF LQFQLTVNVVAVVVAFVGACAIQDTPLKAVQMLWVNLIMDTLASLALATEMPTEELLK RKPYGRTSPLISRTMCKNILGHAVYQLVILFTLIFYGEVCFNIPSGRWAPLHSPPSKH FTIVFNTFVMMTLFNEINARKIHGERNIFKGLFSNPIYYVIWIATMISQVVIIQFGGR WFSTSALNTTEWLWCLAFGVGTLLWGQIVTSIPTGSLPANMTIGSGEAPTNDPLMPDY EDSDTHEKRSGQILWVRGLTRLQTQIRVVKAFQAGLDRREPSLTGQSAARLREISRQL RLQVDSENRSRSTSRGNIKETNNL" ORIGIN 1 atctgtgtgc aactacaact acctgcaaga aagcttttta gctttttcat ataatcaaca 61 aagatgcccg aatatggtgc atcactggag gagcttcgcg cccttatgga gtacaggagc 121 gccgaagcca aagaaaagat cgagacagat tacggaggaa caacgggtct gtgtgaacga 181 ttgaaaacag atcccaataa tggactgccc aacaacgaag aggagctcga aaggcgaaga 241 aacgtgttcg gagccaatga aattccacca catccaccga aatgcttctt acagcttgtt 301 tgggaggctc ttcaggacgt cactcttgtt attcttcttg tttctgcaat cgtatcactt 361 gctctttcat tctacagacc tcctggagaa gatactgcgg gttcggatga cagtgaacac 421 gatgccggat ggatcgaagg tgtcgcaatt ctcatctcag ttattgtcgt cgtactggtc 481 acggctctca atgattacac aaaggaacgt caattccgtg gtctccaagc gaaaatcgaa 541 accgaacatc gattcttcgt ccttcgtggc ggtcaatcgg tacaagtcgt cgtgaatgag 601 ctcgtcgtcg gtgacattgc ccagatcaag tacggagatt tgattccatc agacggaatt 661 atcattcaat cgaatgatct taaaatggac gagtcctcgt tgacaggaga atcggatcaa 721 atcaggaaga gccccgagca cgatccgatt attttgtctg gaacacacgt tatggaagga 781 tctggaaaga tgttggtgac agctgtcgga gtcaactcac agactggaat catcatgaca 841 ctgctcggcg ccgccaagac cgtcgctgaa gaggaacgaa aaactgcaaa gagagaggaa 901 cgacgttctc gatcgtcggt caaatctcat caccaccatc atcatcatca tcatcgtgaa 961 catcgagatt cacatcatca ggctcaaaat caaaatggcg gcgatggagc atctggagcc 1021 gaggaaggaa ctgcacaggc gcttctcgac tcgaaaggag atgaagccat ggctaacgga 1081 aaagctgtcg ctgcagcgga atctgacgga aagaaggaac gatctgtgct ccaggcaaaa 1141 cttacacggc ttgctattca aattggatat gctggttcat tcgtcgccgg atgcaccgtt 1201 ctcattctca tcatccgctt ctgcatctct cgttacgcca ttgacggaaa atcattttca 1261 cttgccgatt tccaacattt catcaatttc ctcatcatcg gagtcaccgt gttggtcgtc 1321 gccgttccag aaggacttcc acttgctgtt actctttctc ttgcctattc ggtcaagaaa 1381 atgatgctcg acaataattt ggttcgtcac ttggacgcgt gtgaaacaat gggaaatgcc 1441 actgcaattt gttctgacaa aacgggaaca ctcaccacca atcgaatgac tgttgttcaa 1501 tcgtttgtca atgatgttca ttacaaggat actccaaaga tcgagtcact ggatcagaat 1561 accgctaaac tcatgatgga ctgtatttca atcaattcct cgtactcgtc tcaagttatt 1621 ccaccaaaac aactcggaga acaagccacc cagcttggaa ataagacaga atgtggtatg 1681 cttggattcg tacttgccct tggaaaatcg tatcaagaga ttcgtgatcg ccatccggaa 1741 gagacaattc caaaagttta caccttcaat tcagtgagaa agagcatgtc aactgtcatc 1801 aatctccccg atggaggata ccgtgtgttc agcaagggag catcggaaat tgtcaccaaa 1861 cgatgcaagt atttcctcgg aaagaatggc actctcacca agttcagctc gaaagacgct 1921 gaaaatctag ttcgtgatgt gattgagcca atggcttctg atggacttcg tacgatttgt 1981 gtggcttaca aggattatgt gccatcgtcc aagaagactg ctgacaatca aatcgcctat 2041 tcatcggagc cagattggga gaatgaagaa atgattgttg gagacatgac cgccatcgct 2101 gtcttgggaa tccaggatcc agttcgtcca gaagttccag ccgccatcac tcgttgccag 2161 gaagccggaa ttacagttcg aatggttacc ggagataaca tcaataccgc cagatccatc 2221 gccaccgcct gcggaatctt gaaacccgga gaggacttta tcgcattgga gggcaaagaa 2281 ttcaacgcca gaattcgtga tgaaaatgga gaagtctcac aggagaagct cgacttgatc 2341 tggccaaagc ttcgtgtctt ggctcgtgct cagccatctg acaaatatgt tctggttaag 2401 ggaatcattg attctcgtgt cactgattca agagaagtcg tcgctgtaac tggagacgga 2461 actaatgatg gacctgctct caagaaggct gatgtcggat ttgctatggg aattgctgga 2521 actgatgtcg ccaaagaggc ttctgatatt attctgactg acgataactt cacttcaatt 2581 gttaaggcag tgatgtgggg acgtaatgtc tacgattcga tcgctaaatt cttgcaattc 2641 caactgaccg tcaacgttgt cgccgtcgta gttgcgttcg tcggtgcctg cgctattcaa 2701 gatactccac tcaaggctgt tcagatgctt tgggttaatc ttataatgga cacgcttgcc 2761 tcgttggcgc tggccactga aatgccaact gaagagttgc tcaaaagaaa accatatgga 2821 cgtacttctc cactcatctc gagaacaatg tgcaagaata tcctcggaca tgctgtatat 2881 caactcgtca ttcttttcac gctgatcttc tacggagaag tgtgctttaa tattccatct 2941 gggcgatggg ctccactcca ctctccacca tcgaaacatt tcactattgt atttaataca 3001 ttcgtcatga tgaccctctt caatgagatc aacgctcgta agattcacgg agaacgtaac 3061 attttcaagg gattgttctc gaatccgatc tattatgtta tctggattgc cactatgatc 3121 tctcaagtcg ttattattca attcggaggt cgctggttca gtacttcagc gttgaacacc 3181 acagaatggc tttggtgtct ggctttcgga gttggaacac ttctttgggg acagatcgtc 3241 acgagcattc caacaggatc ccttccagcc aacatgacca tcggatccgg tgaagctcca 3301 acaaatgatc cattaatgcc agattatgag gattccgata ctcacgaaaa gagatccgga 3361 caaattcttt gggtccgtgg attgactcgt ctgcagactc agattcgcgt cgtgaaggcc 3421 ttccaagccg gactcgatcg tcgtgagcct agtttgactg gacaatcggc cgcccgactt 3481 cgtgagatta gtcggcaatt acgacttcaa gtcgactcgg aaaatcgctc acgatccacg 3541 tctcgtggaa atatcaagga gacgaacaat ctatag // Unexpected Error when closing connection to refseq from NCBI E-utilities. Non-zero exit status returned (255). STDERR: "http status: 429 Too Many Requests at /nfs/public/rw/es/projects/jdbfetch/util/ncbi_refseq_fetch.pl line 124."