Dbfetch
LOCUS NM_001268012 8292 bp mRNA linear INV 22-NOV-2023 DEFINITION Caenorhabditis elegans EGF-like domain-containing protein (ten-1), partial mRNA. ACCESSION NM_001268012 VERSION NM_001268012.3 DBLINK BioProject: PRJNA158 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 8292) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 8292) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 8292) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 8292) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003281). On Apr 15, 2020 this sequence version replaced NM_001268012.2. COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..8292 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="III" gene <1..>8292 /gene="ten-1" /locus_tag="CELE_R13F6.4" /db_xref="GeneID:175953" /db_xref="WormBase:WBGene00006498" CDS 1..8292 /gene="ten-1" /locus_tag="CELE_R13F6.4" /standard_name="R13F6.4f" /note="Partially confirmed by transcript evidence" /codon_start=1 /product="EGF-like domain-containing protein" /protein_id="NP_001254941.1" /db_xref="EnsemblGenomes-Gn:WBGene00006498" /db_xref="GeneID:175953" /db_xref="GOA:H1ZUX1" /db_xref="InterPro:IPR000742" /db_xref="InterPro:IPR011042" /db_xref="InterPro:IPR013017" /db_xref="InterPro:IPR013032" /db_xref="InterPro:IPR028916" /db_xref="UniProtKB/TrEMBL:H1ZUX1" /db_xref="WormBase:WBGene00006498" /translation="MEAGGTPSKVPVLAVGTYHRKEAAPILAAAAMLDNSKATTSTAQ PSIMSTLTKDKHKEPAPPLPHPSECGQPCVSGQSQMFQHRTTNAQGPPPNRPMPRPPA GMPMMTSSHEHDYTNDYEDPEEMARSRGEGFSNHLLIKTTPPPQPHPNFNSYEMSMSQ QRRSQQHQQPMAPPLSDCWGSGVHDSGVLHKNADGAYYIPSGSLRTTSSTLSPASGQR YLDQPHTSGGAPNPTYSDASTTLLKYPLAAGTNQNRRRQQVGTMNNGDPVAGGPMALS KKKKKFDDDSDTCSRWPSKWNILLAAALLVALFVICILLFRAPNYVYTQPAPSSDATS SAAAAASRYQDLGLRALPPAISLGERVDVEFFPKSMATTELTVTKPSRIRFNATVGSG AQLVLLMSAGVHPSLSLHDALFPIRADRIRDSKSPTHIVEEFGSRSRRSLGASSSRHR NIEILSPRSATFEQFVLEGRHYLTFINERSRVEPISFVAEELQRPTTPPKTSSSGTSG AKEHPLASVLVCESNCNQRGECVHGKCHCAPGFTGRTCDEAVCPVVCSGNGVFSGGIC VCKSGFKGKECEMRHNWCEVADCNGRGRCDTDGRCRCNPGWTGEACELRACPHASCHD RGVCVNGTCYCMDGWRGNDCSVFADAIVHVPQAQSPPRRGQEPTESSKTRKAQVKPTP TSEKKKESRELQKPIIATVQVPTESSHPCSAHGQLIDDICQCESGWDSVDCSQQACQC VNGDCLDDGSCQCWKGWRGSNCTDKKCAIGCEDRGKCASDGSCKCSSGWNGENCAIDG CPNQCSGKGECGMDRRSSEWSCRCQAGSTGVDCSVSVEMHCDDGLDNDSDGLIDCDDP ECCSSSSCSSESVCSTAASPIEVLMRMPPIFNANFAQRVGFLIMEKSVQSYTDSSQFN ENLISVIRGRVMWGGSPTGSDDLSTYSNKSTVPLVGVRVSDAAHPLYGFTLTREDGYF DLTVNGARSVTLQFLRTQFQSVKKSVFVSPRQIIHIDDIVLYRQSGGSPPAISMAPAR AKCSPTLRRIPDVVLISNWQYTSDGIETDETSDSSRIVVDSRSIFESLPIQGTDVRLV YDSARSPAAPSTMLIGLLYDRVDKELRKVHINIRIAGRRFDRVLAPRTNLTYVFAWDK MNAYRQSESGLVPVTVRVGYEYQGCDRTSERVWQTRRSQMMGATARKMIGTMWTLDIH HHLDIVNNVVEMGNGGYRLITESEPRVSTFAGLDGVKRDVECLKCEGKVDSISLFRPT TVVYAQDGSLIIGDHNMIRRVSQDGQVSTILTLGLADTSHSYYIAVSPVDGTIAISLP LHKQVWRISSLEPQDSRNNYDVLAGDGTVCASAVDSCGDGALAQNAQLIFPKGISFDK MGNLYLADSRRIRVIDTTGHIRSIGETTPDQHPIRTCAQITKLVDLQMEWPTSLTIDP ITGSVLVLDTNVVYEIDVVHDVVTIALGSPTTCDLANATSSASAKSLDHRRHLIQNAR DITVGTDGAIYVVESDGRRLNQVRKLSSDRSTFSILTGGKSPCSCDVAACGCDDAVSL RDVAASQAHLSSPYAVCVSPSGDVIIADSGNSKIKKVSARMAKYDGRSRTYEVTDAER QEKYTFNRHGQHSSTVSLITGRTFFNFSYQVDSPISMISEIRAASGVVLRVLKRNDSL FDLETTLGQRTTLTMSAYDGTLEQVSKRDSATSRDATKLFYKKGLLTSRIDVATAVGF EYDEYGRAIGLKRDREYWRLGEETISMGSVNTEVLLNGQRFQQVRLGEGNLAVHSTNG ATTRLISLRNEGYSLASPLGTSTLYDKSSSIPDSNGEPLISRRRTKVPAIGNPQRREL TTRWDWRHVARRGDDSDGSLGRRKVAEINGVNMFSMEYDVKSNQDTLRLGSTTDDAQA LLFIDYTSSGRIRRISAPEDSQMAEMNITWDGAGRKSEVTWGSWKIRLTYDNSNRLTE HAIDGARVPIKMSYAGASRRPNEIQHDGAKWNIQYDNYDRIKEVISKSQEATSFSSIA LGGDEWVLKRRTSLNSKPSLVRLSREGKVLESTTPDENHYWLERKDPITGRTTEILND EETTVVTCWSPEGAPMCSRSRNLQENTTMQGHLVARKSVTIMTPTSSEPSITSSFTYE YDDMLRVTTIQPVIEQSVLESIQLSYDERRGHVAAINGFKWARDASTSRCQGHGLMYE TSKANDHRQVVERKLIFGDARASIKIIRDKAGRASESHLEISSSGTQRNQKITRTFDA AGRVASVEQNDQEPVRIIWNSDARVEKINDRVVEWNRGGALKTFQDISYQVDSIGWVV KRDNTTVFGYDGKGRLVSARSSQLRINIFYDREDRVVQIQNSKDFIHFYYGYIDTPKL VSHFSKNGKISTLFYDDDSVPFAMQSDDGTRYALLTDETSTIKAIIGDSNVLRIIDRS VFGALLPSSSSSHPFLPIGYLGGIEISEISVSILNNGRPLDLYSERYMSISPEAVVRL ELNEKFSNSIDLMALEIDRQPFRVENVPEDFETWFSLAGLSPNLLPSAHLGLPASSAI VHRLLSSFPRKLRPLTHLTTVLPTRLASDISLTSPTSETSWSIDDVGFSNLLILNEDA TTGEVMVEMLSDLKSEEREVISKLFDGVKSLDFATWGLVPTRHLWRAPNSKLELSSTS FSHFTMAVNKDSVELRNGKSKIVVHFSENKAEIVKKIVEELKTRENIAVWRAERKRAE AGEKTWRQWSDRETRELTSKGSVSGYDIEMKPAHQSGLLASVHSWKFRKSE" ORIGIN 1 atggaagccg gcgggactcc atcgaaagtt ccagtcttgg cagttggaac ctatcatcga 61 aaagaagcag ctcctattct ggcggcggcg gcaatgcttg ataattccaa agcaacaaca 121 tcaactgcac aaccttcgat tatgtcaact ttaacaaaag ataaacataa agagcccgca 181 ccaccgttac ctcatccatc agagtgcggg cagccgtgcg tttcgggaca gtcacaaatg 241 ttccagcaca ggaccacgaa tgcgcaaggc ccaccgccta atcgccctat gccacggcca 301 ccggcaggaa tgccgatgat gacgtcatca cacgaacatg actacacaaa tgattatgag 361 gatccggagg aaatggcaag aagtcgtgga gaaggatttt caaaccattt gctcatcaaa 421 acgacaccgc caccacaacc tcaccccaac ttcaactcct atgaaatgtc catgtcacaa 481 cagcgtcgtt cccagcaaca ccagcagcca atggctccac cactttcaga ttgttgggga 541 agtggagttc atgatagtgg tgtacttcat aagaatgcag atggagcata ttatattcca 601 agcggttcat tacgaaccac atcatcaacc ctctcaccag catctggaca acgttatttg 661 gaccaacctc atacgtctgg aggagcaccg aacccaacgt attcggatgc atctaccact 721 ttgctgaaat acccactcgc agccggaact aatcagaata gaagaaggca gcaagttggc 781 actatgaaca atggtgatcc ggtggctggt ggtcccatgg ctttatcgaa aaagaagaaa 841 aagtttgacg acgatagcga cacgtgctcc agatggccat ccaaatggaa tattttgcta 901 gccgccgcgc ttcttgttgc actttttgtt atttgtattt tgcttttccg tgctccaaac 961 tacgtgtaca cccaacctgc tccctcatca gacgccacat catcagctgc cgccgccgcc 1021 agtcgatatc aagatcttgg tcttcgagcc cttccgccag caattagtct tggtgaaaga 1081 gtcgacgtgg aattttttcc aaagtctatg gcaacaacag agctcaccgt tactaagcct 1141 tcacggatcc gattcaatgc aacagttgga tcaggtgctc agctggttct tctaatgagt 1201 gctggagttc accccagtct gagtctccat gatgcacttt ttccaattcg tgctgacagg 1261 attcgtgact caaaaagccc tactcatatt gtagaagaat ttgggtcacg aagtcgacgt 1321 agcctcggag cttcatcgtc tcgacatcga aacattgaaa ttctgtcccc acgaagtgcc 1381 acgtttgaac aattcgttct tgaaggacgt cactatctga catttatcaa cgaacgaagc 1441 cgagttgaac caatttcatt cgttgccgaa gaacttcaac gcccaacaac tcctccgaaa 1501 acttcctcat ctggaacctc aggagcaaaa gagcatccat tagcatcagt tcttgtatgt 1561 gaatccaact gtaatcaacg tggagaatgt gttcatggaa agtgtcattg tgctcctggt 1621 ttcacgggcc gaacttgcga tgaagctgta tgtccagtcg tttgcagtgg aaatggagtc 1681 ttctctggtg gaatttgcgt ttgcaagtct ggattcaaag gaaaggaatg tgagatgcgg 1741 cacaattggt gtgaagtagc agactgtaat ggaaggggac gatgtgacac tgacggaaga 1801 tgccgttgta atcctggatg gactggtgaa gcttgcgagc ttcgtgcatg tccacatgca 1861 tcgtgccacg atcgaggtgt ttgtgtgaat ggaacatgct attgtatgga tggatggaga 1921 ggaaatgatt gttcagtttt tgctgatgca attgtacatg tcccacaagc acagtctcca 1981 ccgagaagag gtcaagagcc aacggaatca tctaaaactc ggaaggctca agtgaaaccg 2041 actccaactt ctgagaagaa gaaagaaagc cgagagcttc aaaaaccaat aattgccaca 2101 gttcaagttc ctacagaatc aagccatccg tgctcagctc atggtcaact gattgatgac 2161 atatgtcagt gtgagtcagg ttgggattcg gtagactgtt ctcaacaagc atgtcaatgt 2221 gttaatggag actgtcttga tgatggatca tgtcaatgtt ggaaaggatg gagaggatct 2281 aactgcacag ataagaaatg tgcgattgga tgtgaagatc gtggaaaatg tgcatcggat 2341 ggatcatgta aatgttcttc tggttggaat ggagaaaact gcgccattga tggatgtcca 2401 aatcagtgtt ccggaaaagg cgaatgtggg atggatcgtc gttcttccga atggtcatgt 2461 cgttgtcaag ctggatctac tggtgttgac tgttccgttt ccgttgaaat gcattgtgat 2521 gatggacttg ataacgactc tgatggtctt atcgattgtg atgatccgga atgttgctca 2581 tcgtcatctt gctcttctga atctgtatgt tctaccgcag catctcccat cgaagttctg 2641 atgcggatgc caccaatatt caatgcaaac tttgctcaaa gagttggatt tttgataatg 2701 gaaaagtcag tgcaaagcta tacggattca tctcagttca atgagaactt gatttctgtg 2761 attagaggac gtgttatgtg gggtggatct ccaacaggtt cggacgatct ttccacatat 2821 tccaataaat ctacagttcc acttgtcgga gtccgtgtct cggatgcagc tcatccactt 2881 tacggattca ccttgacaag agaagatgga tattttgatc ttactgtcaa tggagcacga 2941 agtgtcactc ttcaatttct gcgaacacaa ttccagtctg tcaagaagag cgtttttgtt 3001 tctccccgtc aaattattca cattgatgac atcgtgctct atcgtcaatc tggaggatca 3061 ccacctgcaa tatcaatggc accggcacgc gcaaaatgct cgccaacgtt gagaagaatt 3121 ccagatgttg tattgatttc taactggcag tacacatctg atggaattga aactgacgaa 3181 acctctgatt cttctcgaat tgtcgttgat tctagatcaa tcttcgagtc attgccaatt 3241 caaggaactg atgttcgact tgtatatgat tctgcaagat caccagctgc tccatcaaca 3301 atgctcatag gattattgta tgatcgagtc gacaaggagc tgcgcaaagt tcatatcaat 3361 attcggattg ccggacggcg gtttgataga gttctggctc cgcgtaccaa tctcacttat 3421 gtatttgcct gggataaaat gaatgcctac cgtcaaagcg aatcaggatt agttccagta 3481 acagttcgag ttggatatga ataccaagga tgtgatagaa caagtgaaag ggtatggcaa 3541 acaagaagaa gtcaaatgat gggagcaact gctagaaaaa tgattggaac aatgtggact 3601 cttgatatac atcatcattt ggatattgtt aataatgtcg tcgagatggg aaatggtgga 3661 taccgtttaa tcactgaaag tgagccacgt gtctcaacat ttgcaggact tgatggcgtg 3721 aaacgagatg tggaatgctt gaaatgtgaa ggaaaagtcg actcaatttc tctcttccgc 3781 ccaactacag tagtttatgc tcaagatgga agcctaatta ttggagatca caatatgatt 3841 agaagagttt cacaggacgg tcaagtctca acgattctaa cattgggatt ggcagatact 3901 tcacattcgt actatatcgc ggtgtcaccg gtagatggta caattgccat ttcactgcca 3961 cttcataaac aagtgtggag gatttctagt cttgaaccac aagattctcg aaacaactat 4021 gatgtactgg ctggagacgg aactgtttgt gcttctgcag tcgactcgtg tggtgatgga 4081 gcacttgcac agaatgccca actcattttc cccaagggaa tttcttttga taaaatggga 4141 aatttatact tggctgatag tcgtcgcatt cgagtcatcg acactaccgg acatatccga 4201 tcaattggag aaacaacacc agatcagcat ccgatcagaa cttgtgctca aattacaaaa 4261 cttgtcgatc ttcaaatgga atggccaaca tctctgacaa ttgaccccat aactggatct 4321 gtattagttc tcgacacaaa tgttgtctat gaaattgacg ttgtgcatga tgtagttaca 4381 attgctcttg gctcaccgac cacttgtgat cttgccaatg caacttcctc ggcttcagcc 4441 aaatcacttg atcatcgtcg tcacttgatt cagaatgctc gtgacatcac tgtaggaacg 4501 gatggagcta tttatgttgt tgaatctgat ggaagacggc taaatcaagt tcgaaaactc 4561 agctccgatc gttctacatt ctccattctc accggtggaa agagcccatg ctcttgtgat 4621 gtggcagctt gtggatgtga cgatgcagtt tccctccgtg atgttgcagc atctcaagct 4681 catttgagct ctccttacgc ggtctgtgtt tctccttctg gtgacgtcat tatcgctgat 4741 tctggaaact ctaaaattaa gaaagtatcg gcccgtatgg caaaatacga tggacgttct 4801 cgaacttatg aagtaactga tgctgagcgt caggaaaaat acacattcaa ccgtcatgga 4861 caacattctt ctaccgtatc tcttatcact ggacgcacct ttttcaactt cagctatcaa 4921 gttgactcgc caatatctat gatttctgag atcagagcag catctggagt tgttcttcgt 4981 gttctgaaac gaaatgattc actcttcgat ttggaaacta ccctcggcca aagaactaca 5041 ttgaccatgt cagcatatga tggaactttg gagcaagtgt ccaagagaga ttctgcaact 5101 tcaagagacg caacaaaact gttttacaag aaaggattgt tgacttcgag aatagatgta 5161 gctactgcag ttggatttga atatgatgaa tatggaagag ctattggtct gaaacgtgat 5221 agggaatatt ggagactcgg agaggaaacg atttctatgg gatcagtgaa cactgaagta 5281 cttctcaacg gacaacgctt ccaacaagtt cggctcggtg aaggaaatct tgcagttcat 5341 tccacaaatg gtgcaactac tcgcctaatt agcctgcgca atgaaggata ctcattggca 5401 tcaccacttg gtacatcaac actttacgac aaaagctcaa gtataccgga tagtaacggg 5461 gagccattga tatcacgtcg aagaaccaaa gttcctgcaa tcggaaaccc acaaagaaga 5521 gaactgacaa ctcgatggga ctggagacac gtggctcgtc gtggtgatga ttcggatggc 5581 agtttgggaa gacgaaaagt ggcggagatt aacggtgtga acatgttctc aatggaatat 5641 gatgttaaat cgaaccaaga tactcttcgt cttggctcaa caactgatga tgctcaagct 5701 cttctcttta tcgactacac ttcatctgga cgcattcgtc gcatttctgc cccagaagat 5761 tctcaaatgg ctgagatgaa tatcacttgg gatggagctg gaagaaaatc tgaagttact 5821 tggggatctt ggaagattcg tcttacttat gacaattcaa accgtcttac tgagcatgct 5881 attgatggag caagagttcc aattaaaatg agctatgcag gagcttccag gagaccgaat 5941 gagattcaac atgacggagc caaatggaac attcagtacg ataactatga tagaatcaag 6001 gaagttatca gtaaatctca agaggctaca tcattctctt caattgcgct tggtggggat 6061 gaatgggtcc tgaaacgaag aacctcgtta aactccaagc catcacttgt tagattgagt 6121 agagaaggga aagttctaga gtcgacaaca cctgatgaaa atcattattg gcttgagaga 6181 aaagacccta ttactggaag aactactgag atattgaatg acgaagagac tactgtagtg 6241 acatgctggt ctccagaagg tgcaccaatg tgttctcgga gcaggaacct ccaagaaaat 6301 acaacaatgc aaggacacct ggttgctagg aaaagcgtaa caataatgac accaacatct 6361 tcagagcctt ccataacttc atcgttcact tatgaatacg acgacatgct gcgcgttacc 6421 acaattcagc cagttatcga acaatccgta cttgaatcta ttcaactgtc ttacgatgaa 6481 cgtcgcggac atgttgcagc aatcaatgga ttcaaatggg cgcgcgatgc atcgacttcc 6541 cgttgtcaag gtcatggatt aatgtacgaa acttccaagg caaatgatca tcggcaggtt 6601 gttgaacgta agctgatctt cggagatgcg agagcttcaa ttaaaataat acgtgacaaa 6661 gctggaagag cttctgaatc tcatctggag atatcttcat caggaactca acggaatcag 6721 aaaatcacaa gaacttttga tgctgctgga cgtgttgcaa gtgtcgagca gaatgatcag 6781 gaaccggttc gaattatttg gaattcagat gcacgcgttg agaaaataaa tgatagagtt 6841 gtggagtgga atcgaggagg tgctctgaaa accttccagg atatatctta ccaagtcgat 6901 tctatcggat gggttgtaaa gcgagataat accacagtgt ttggatacga tggaaaagga 6961 cgacttgttt cggctcgttc cagtcagctc agaatcaaca ttttttacga tagagaagat 7021 cgagttgttc aaattcaaaa ttcgaaagat tttattcact tctattatgg atatattgac 7081 actccaaagt tggtttctca tttctcaaag aatggaaaaa tctcaacatt attttacgac 7141 gacgattccg ttccatttgc aatgcaatct gatgatggaa ctcgctatgc attgttaact 7201 gatgaaactt ccaccattaa agcaattatc ggagactcga atgttcttcg aatcattgat 7261 cgttcagttt tcggagctct acttccttcg tcatcgtctt cgcacccatt ccttcccatt 7321 ggatacctcg gtggaattga aatttctgag atttctgtgt caattctgaa taatggaaga 7381 ccgttggatt tatacagtga acgttacatg tcaatttctc cagaagcagt agttcgactt 7441 gagcttaacg aaaagttttc gaattctatt gatttgatgg cattggaaat tgacagacaa 7501 ccattccgcg ttgagaatgt tccagaagat ttcgaaacat ggttttcact tgccggacta 7561 tcgccaaatc ttctcccatc agctcatctt ggccttccag catcatccgc tattgttcac 7621 agacttttgt cttctttccc tcggaagctc cgcccactta ctcacttgac taccgtactt 7681 ccaacacgat tagcctcaga catatccctg acatctccaa cttctgaaac ttcatggtca 7741 attgatgacg ttggtttctc aaatttgtta attttgaacg aagatgctac aactggagag 7801 gttatggttg aaatgctatc tgatttgaaa tctgaagaac gcgaagtcat ttcaaaactg 7861 tttgatggag tcaaatctct tgattttgcc acgtggggtc tggtaccaac gcgtcatttg 7921 tggagagctc cgaactcgaa gctagagctc agctcgacct cattctcaca ttttacaatg 7981 gccgtgaaca aggacagtgt ggagttgaga aacggaaaat cgaagattgt tgtccacttt 8041 tcggaaaata aagctgaaat tgttaagaaa attgtggaag agctgaagac acgcgagaac 8101 attgccgttt ggcgtgccga acggaagaga gctgaagctg gagagaaaac gtggagacaa 8161 tggagtgatc gtgagacacg cgaactaact tcgaaaggtt ctgtctctgg atacgatatt 8221 gagatgaagc ctgcccacca atccggactc ctcgctagtg tacattcatg gaagttccga 8281 aaatctgaat ag //