Dbfetch
LOCUS NM_001267506 2230 bp mRNA linear INV 22-NOV-2023 DEFINITION Caenorhabditis elegans Glycosyl hydrolase family 13 catalytic domain-containing protein (atgp-2), mRNA. ACCESSION NM_001267506 VERSION NM_001267506.4 DBLINK BioProject: PRJNA158 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 2230) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 2230) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 2230) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 2230) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003280). On Feb 2, 2021 this sequence version replaced NM_001267506.3. FEATURES Location/Qualifiers source 1..2230 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="II" gene 1..2230 /gene="atgp-2" /locus_tag="CELE_C38C6.2" /db_xref="GeneID:175125" /db_xref="WormBase:WBGene00000225" CDS 10..1953 /gene="atgp-2" /locus_tag="CELE_C38C6.2" /standard_name="C38C6.2a" /note="Confirmed by transcript evidence" /codon_start=1 /product="Glycosyl hydrolase family 13 catalytic domain-containing protein" /protein_id="NP_001254435.1" /db_xref="EnsemblGenomes-Gn:WBGene00000225" /db_xref="EnsemblGenomes-Tr:C38C6.2a" /db_xref="GeneID:175125" /db_xref="GOA:O45298" /db_xref="InterPro:IPR006047" /db_xref="InterPro:IPR017853" /db_xref="InterPro:IPR031984" /db_xref="UniProtKB/TrEMBL:O45298" /db_xref="WormBase:WBGene00000225" /translation="MDATDRLMPGPEGKTPRFYEVDRGNKTESYISAVSGNPVVPEHI MRKEKRQEQEEAPPQKSWERPPAPTNPKNTDQIGLSEQELEQFRNDPCWKFIRTVLFV LFWLIWLALFAVAILLVCFSPTCVLRAKPNWWQTAVAYHVWVPSFQDSDGDGVGDVDG LINRLDQLRKSGVQTVWPSPFLISDDEKTAVRSFSQMDPKIGVNQKADELINKIHEKE MNIVISFPIATTSLEHEWFLNSATASKTPNANYSQFYTWVSKAADSNFFTEHKNLFYL HEKGNPKSAVLNWQNSNLREHMFNALSNWIDRGVDGFELQGIEYLARTPNGTEPDWNS IYDVIRDIRFHVDSYSNESTIADGKKIALFSTREEAKEKDKKRMAKSGMDTVINYELG EVEKDTKICHKNEGSVATCVHEILSDVLLFHSLNEQVWPHWRFGSPDLARIASRVGSR PHAQLLMVLQMILPGTNNIYYGEEIGMRNLANDSRVPPQKGAMQWDDSLNGGFTSAIS PPVPSNIDVANINWKRQYAEPQSTLKIFAKLAKLRQREDALMTGTTLIGRLVDGAFTI TRFNNFENRTTGNIYVAALNFAEHPVKLPLTDLPSNSKLHKSTIVTATSNCVAYYARQ TVDFGLKEIELEPNEGVVFRYSA" ORIGIN 1 acagtcaaaa tggacgccac cgaccggcta atgccgggtc ccgagggcaa gacaccaagg 61 ttttacgaag tagaccgtgg caacaaaact gaaagctaca ttagtgcggt ctctggaaac 121 cccgtagtgc ccgaacacat tatgcggaag gaaaaacgac aagaacaaga agaagcacct 181 ccacaaaagt cttgggaacg accaccggct cccactaatc ctaaaaatac tgatcaaatc 241 gggttgagcg aacaagagtt ggagcagttt agaaatgatc cttgctggaa gtttattaga 301 accgtccttt ttgtgctctt ctggctcatt tggcttgctc ttttcgcggt tgcaattctc 361 ctggtctgct tctccccaac ctgcgtccta cgcgcaaagc ccaactggtg gcagacagcc 421 gtagcctatc acgtctgggt accgtccttc caggattcag atggtgatgg tgtaggagac 481 gtcgatggac ttattaatcg actcgatcaa ttgagaaagt ccggagttca aacagtgtgg 541 ccttctccgt tcttaatatc ggatgatgag aagacggctg taagaagttt cagtcaaatg 601 gacccaaaaa ttggtgtgaa tcagaaggct gatgagctta tcaacaagat tcatgagaaa 661 gaaatgaata ttgtaataag tttccctatt gccaccacct cactagaaca cgaatggttc 721 ttgaactcag cgacggcaag caagacacca aatgccaact attcgcagtt ctatacttgg 781 gtcagcaagg cggcagactc caactttttc acagagcaca agaatctctt ctatcttcat 841 gagaaaggaa atccaaaatc cgctgtacta aactggcaga acagtaatct ccgtgagcac 901 atgtttaatg ctctttccaa ctggattgac cgcggagtcg atggatttga gcttcaagga 961 atcgagtacc ttgcaagaac gccaaatggt acagaacctg actggaactc aatttatgac 1021 gtcataaggg atattagatt ccatgtggat tcctactcga acgagagtac aattgccgat 1081 ggaaagaaaa tcgccttatt ctctaccaga gaagaagcga aggagaagga caagaagcgt 1141 atggcaaaga gtgggatgga cacagtcatc aactacgagt tgggagaagt tgagaaggac 1201 actaagattt gtcacaagaa cgagggatca gttgccactt gtgttcacga gattctgtcc 1261 gacgtcctgc tgttccattc gttgaacgag caagtttggc ctcattggag attcggctcc 1321 ccggacctgg ctcgaattgc gtcccgtgtc ggatcccgtc cacatgcaca actcctgatg 1381 gttctccaaa tgattctacc tggaactaac aatatctact acggtgagga aatcggcatg 1441 cgaaatctgg cgaatgactc cagagtccca ccacagaagg gtgcgatgca atgggatgac 1501 tcgttgaacg gaggattcac atcagccatc agtccgccgg ttccgtcaaa tatcgacgtg 1561 gcgaatatta actggaaacg gcaatacgct gagcctcagt caacattgaa gattttcgcg 1621 aaactggcga aattgagaca gagagaagat gcactgatga ctggaaccac gctgattggg 1681 cgactagttg atggagcatt cacgattacg agattcaata attttgaaaa tagaactact 1741 ggaaatatct acgtagccgc tctcaacttt gccgagcatc cagtaaaact tccactgaca 1801 gacttgccaa gcaactcaaa attgcataaa tctacaatag tcaccgccac atccaactgt 1861 gtcgcctact acgcacgtca gacagtagac tttggcttaa aggaaatcga attggaacca 1921 aatgaaggcg tcgtgttccg ctattcagca tgattatcta attcatcttg ttatgcaagg 1981 ttttccaata atatgtgtca gaacaaaact cttagaacca atttttttgt aattttcaat 2041 ttttctatgt tacctcggcc cccgattgct ttcgttttcc ctgtcaacaa tggtgcatac 2101 cttcgttttt tcctctttct tttcttcgaa tttctcaaat ccccgctact tatttatatg 2161 gtgtgacata tccgccccgc gtgaattgtt aattttaaaa attaaatttt tataataaaa 2221 tatacaatta //