Dbfetch
LOCUS NM_001202206 2373 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster uncharacterized protein (CG17732), partial mRNA. ACCESSION NM_001202206 VERSION NM_001202206.1 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2373) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2373) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2373) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2373) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2373) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2373) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2373) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2373) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2373) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2373) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2373) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2373) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2373) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2373) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2373) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (10-NOV-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2373) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2373) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2373) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2373) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2373) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 21 (bases 1 to 2373) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-OCT-2015) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 22 (bases 1 to 2373) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 23 (bases 1 to 2373) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 24 (bases 1 to 2373) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 25 (bases 1 to 2373) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_037436). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..2373 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="3L" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene <1..>2373 /gene="CG17732" /locus_tag="Dmel_CG17732" /gene_synonym="Dmel\CG17732" /map="76D8-76D8" /db_xref="FLYBASE:FBgn0036923" /db_xref="GeneID:40182" CDS 1..2373 /gene="CG17732" /locus_tag="Dmel_CG17732" /gene_synonym="Dmel\CG17732" /note="CG17732 gene product from transcript CG17732-RB; CG17732-PB" /codon_start=1 /product="uncharacterized protein" /protein_id="NP_001189135.1" /db_xref="FLYBASE:FBpp0292793" /db_xref="GeneID:40182" /db_xref="FLYBASE:FBgn0036923" /translation="MVVSESESKFLSESEPQPMSERQAIDDGNIENLLSTLADEEETE SEVNIPEDTNQKDVGSSDNAEPKDLKHKHGDFNSPAKDDITRPLVLEERHSLSLAETK KRREIAFSNELLFIPKELARSELQQRTRTLTRYAKNREYHLRMLKFPIGSGRPRYVAK KMKEACYPKSNEANHDPETTDIKQEECIDEPNEVFQNPRELPLSMPDLETEIGEQSQL CDNDEMNIMLYDFVKKEVEFVSESEKINRKILQSQRESVIRTSNSKRQHYPYFSWHNP EGECGDSKGEPEIEVGCCDVECMTIVKEEVGEEVDEEVMMKKVEEEEVRHTQELGSPE QVDPQPDEELESPEQPQAIGFLYSSTQSQVPVQDLAPVRSGSPEDFGQTALCQQLIHH IVQPNVCNEDAYHQSITCNNNASDRMNQNLGPHPTIEASVAHEVSFQWNPQNADNYTN QNQLFHKQQLHIQNQPYLQHHFKLPASQQQHEAIFQQQQQAGKDNLQQLRVLYQRIKN RERNQLHHLSKSMKKVLDERLICERQHAEEKRLFQLKMEQFKKVEEKFKLDREQLQHQ LRSDMKTLELKMANQQRQLEEKALAWSWHQQQQLQQQQQHLQRHQLLIQQQPEAQSPQ QQQQQHFVHPDAHMNTETYIMQQQAFLYDPSYIYSTAYQESVAYQQRIQAYHEQQNYQ APESHTTAVELQQRFLLPPPPYCQSSSRTCTQVSPSARKVRRCRTRISELGTDPYPCQ IRTPLPPASLILPGHRNLQSQPLEPRNDHFGINSVMSNYVASFMNMQADR" ORIGIN 1 atggtcgtgt ccgaatcaga atccaagttt ctgtctgagt ccgagcctca acctatgagt 61 gagcgccagg ctattgacga cggaaatata gaaaacctac ttagtactct tgctgatgaa 121 gaggaaactg aaagcgaagt taatattcca gaagatacca accaaaaaga tgtcggtagt 181 tcagataatg cagaacccaa ggatctaaag cataaacacg gagattttaa cagtccagca 241 aaggacgata taacccgacc tcttgtcctc gaagaaaggc actcgctatc ccttgctgaa 301 accaagaagc gcagagagat tgctttctcc aacgaactac ttttcatacc caaagaactc 361 gcacgcagcg aacttcagca gcgcacaagg acactgacta gatacgccaa gaatcgtgag 421 taccatctcc gaatgctgaa atttccgatc ggttcgggtc gtcctcgata cgtggctaag 481 aaaatgaagg aggcatgtta tccaaaatcc aatgaagcca accatgatcc cgaaactacg 541 gacattaagc aagaagaatg cattgatgag ccaaacgaag tgttccaaaa tccaagggag 601 ttacccctta gcatgcccga tctggaaaca gaaattggag agcagagtca actatgcgat 661 aatgatgaaa tgaacattat gctgtacgac tttgtgaaga aggaagtcga gtttgtctcg 721 gaatcggaaa agataaaccg caaaatcctg cagagccagc gtgaaagtgt gataagaact 781 agcaactcca aacgccagca ctatccctac ttttcgtggc acaatccaga gggagagtgt 841 ggtgattcga aaggggagcc ggaaatcgaa gtgggctgct gtgacgtgga gtgcatgacg 901 atagtgaagg aggaagtggg cgaggaggtg gacgaggagg tgatgatgaa gaaggtagag 961 gaggaggaag tgcgacatac ccaggaatta gggagtcctg aacaggttga tccacaacca 1021 gatgaggagc ttgagtcacc tgagcaacca caggccatcg gcttccttta ctcttccaca 1081 caaagccagg ttcctgtgca agacctggct cccgtaagat caggatcccc tgaagatttc 1141 ggacaaacgg cactgtgtca gcagttaatt caccacattg tgcaaccgaa tgtctgcaac 1201 gaggatgcat accaccaatc catcacgtgc aacaataacg cctccgatcg aatgaatcaa 1261 aatctcgggc cacatccgac tattgaggcg tctgtcgccc acgaggtatc cttccaatgg 1321 aatccccaaa atgctgataa ctacacgaat caaaatcagc tattccacaa gcagcagctg 1381 cacatccaga atcaaccata cctgcaacat catttcaaat tgccagccag tcagcagcaa 1441 cacgaagcga ttttccagca acagcagcaa gcggggaagg ataatctgca gcagttgaga 1501 gtcttgtatc agcggatcaa gaaccgtgag aggaatcaac tgcatcacct gagcaagtcc 1561 atgaagaagg tcttggatga gcgtctgatc tgcgagcgac agcatgcgga ggagaagcga 1621 ttgttccagc tcaaaatgga gcaattcaag aaagtggagg agaagttcaa gttggacagg 1681 gagcaactgc agcaccaact gagatccgat atgaaaactc tcgagctgaa gatggctaac 1741 cagcagcgcc agctggagga gaaggctctg gcctggtcct ggcaccagca gcagcaactc 1801 caacagcagc agcagcattt gcagcggcac cagttgctga tacaacagca accagaagca 1861 caatcgccgc agcagcagca gcaacagcac tttgtgcatc cagatgccca tatgaacacg 1921 gagacttata taatgcagca acaggccttc ctgtacgatc catcctacat atactcaact 1981 gcctaccagg aatcagtggc gtatcaacaa cgcatccaag cctaccatga gcagcagaac 2041 taccaagcac ccgagtcgca taccacggca gttgagctgc agcaaagatt tctccttccg 2101 ccacctccgt attgccaatc cagcagcagg acctgcaccc aagttagtcc ctctgcccgg 2161 aaagtgaggc gttgtcgcac aaggatttct gagctgggaa cggatccgta tccttgccaa 2221 ataagaactc ccttgccgcc agcttcgctg atcttgcccg gccaccggaa tttgcaatcc 2281 caaccccttg agcccagaaa cgaccatttc ggaataaact cggtcatgtc caactacgtg 2341 gctagcttta tgaacatgca ggctgatcga taa //