Dbfetch
LOCUS NM_001201651 2945 bp mRNA linear INV 26-DEC-2023
DEFINITION Drosophila melanogaster amun, transcript variant G (Amun), mRNA.
ACCESSION NM_001201651
VERSION NM_001201651.2
DBLINK BioProject: PRJNA164
BioSample: SAMN02803731
KEYWORDS RefSeq.
SOURCE Drosophila melanogaster (fruit fly)
ORGANISM Drosophila melanogaster
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
REFERENCE 1 (bases 1 to 2945)
AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St
Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K.,
Strelets,V., Russo,S.M. and Gelbart,W.M.
CONSRTM FlyBase Consortium
TITLE Gene Model Annotations for Drosophila melanogaster: Impact of
High-Throughput Data
JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015)
PUBMED 26109357
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 2945)
AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St
Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B.,
Russo,S.M. and Gelbart,W.M.
CONSRTM FlyBase Consortium
TITLE Gene Model Annotations for Drosophila melanogaster: The
Rule-Benders
JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015)
PUBMED 26109356
REMARK Publication Status: Online-Only
REFERENCE 3 (bases 1 to 2945)
AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I.,
Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R.,
Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G.,
Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N.,
Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A.,
Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E.
TITLE The Release 6 reference sequence of the Drosophila melanogaster
genome
JOURNAL Genome Res 25 (3), 445-458 (2015)
PUBMED 25589440
REFERENCE 4 (bases 1 to 2945)
AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M.,
Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F.,
Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E.
TITLE Sequence finishing and mapping of Drosophila melanogaster
heterochromatin
JOURNAL Science 316 (5831), 1625-1628 (2007)
PUBMED 17569867
REFERENCE 5 (bases 1 to 2945)
AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H.
TITLE The Release 5.1 annotation of Drosophila melanogaster
heterochromatin
JOURNAL Science 316 (5831), 1586-1591 (2007)
PUBMED 17569856
REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325]
REFERENCE 6 (bases 1 to 2945)
AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D.,
Ashburner,M. and Anxolabehere,D.
TITLE Combined evidence annotation of transposable elements in genome
sequences
JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005)
PUBMED 16110336
REFERENCE 7 (bases 1 to 2945)
AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A.,
Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A.,
Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W.,
Celniker,S.E., Rubin,G.M. and Karpen,G.H.
TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun
assembly
JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002)
PUBMED 12537574
REFERENCE 8 (bases 1 to 2945)
AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J.,
Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E.,
Rubin,G.M., Ashburner,M. and Celniker,S.E.
TITLE The transposable elements of the Drosophila melanogaster
euchromatin: a genomics perspective
JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002)
PUBMED 12537573
REFERENCE 9 (bases 1 to 2945)
AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S.,
Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E.,
Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L.,
Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D.,
Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J.,
Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M.,
Rubin,G.M. and Lewis,S.E.
TITLE Annotation of the Drosophila melanogaster euchromatic genome: a
systematic review
JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002)
PUBMED 12537572
REFERENCE 10 (bases 1 to 2945)
AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W.,
Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E.,
Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M.,
Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S.,
Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M.,
Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W.,
Gibbs,R.A. and Rubin,G.M.
TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila
melanogaster euchromatic genome sequence
JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002)
PUBMED 12537568
REFERENCE 11 (bases 1 to 2945)
AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D.,
Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F.,
George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N.,
Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X.,
Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D.,
Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L.,
Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D.,
Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M.,
Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S.,
Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P.,
Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A.,
Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B.,
Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I.,
Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S.,
Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C.,
Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S.,
Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z.,
Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J.,
Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J.,
Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z.,
Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C.,
Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A.,
Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C.,
McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C.,
Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L.,
Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K.,
Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S.,
Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K.,
Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I.,
Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C.,
Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R.,
Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A.,
Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT,
Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F.,
Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H.,
Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O.,
Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C.
TITLE The genome sequence of Drosophila melanogaster
JOURNAL Science 287 (5461), 2185-2195 (2000)
PUBMED 10731132
REFERENCE 12 (bases 1 to 2945)
AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R.,
Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R.,
Smith,E., Yu,C. and Rubin,G.
CONSRTM Berkeley Drosophila Genome Project
TITLE Drosophila melanogaster release 4 sequence
JOURNAL Unpublished
REFERENCE 13 (bases 1 to 2945)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 14 (bases 1 to 2945)
CONSRTM FlyBase
TITLE Direct Submission
JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological
Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA
REFERENCE 15 (bases 1 to 2945)
CONSRTM FlyBase
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological
Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA
REFERENCE 16 (bases 1 to 2945)
CONSRTM FlyBase
TITLE Direct Submission
JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological
Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA
REFERENCE 17 (bases 1 to 2945)
CONSRTM FlyBase
TITLE Direct Submission
JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological
Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA
REFERENCE 18 (bases 1 to 2945)
CONSRTM FlyBase
TITLE Direct Submission
JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological
Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA
REFERENCE 19 (bases 1 to 2945)
CONSRTM FlyBase
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological
Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA
REFERENCE 20 (bases 1 to 2945)
AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R.,
Park,S., Svirskas,R. and Karpen,G.
TITLE Direct Submission
JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project,
Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne
Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA
REMARK Direct Submission
REFERENCE 21 (bases 1 to 2945)
AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S.,
Svirskas,R. and Rubin,G.
TITLE Direct Submission
JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project,
Lawrence Berkeley National Laboratory, One Cyclotron Road, MS
64-121, Berkeley, CA 94720, USA
REMARK Direct Submission
REFERENCE 22 (bases 1 to 2945)
AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H.
CONSRTM Drosophila Heterochromatin Genome Project
TITLE Direct Submission
JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project,
Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron
Road, Mailstop 64-121, Berkeley, CA 94720, USA
REFERENCE 23 (bases 1 to 2945)
AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J.
TITLE Direct Submission
JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive,
Rockville, MD 20850, USA
COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This
record is derived from an annotated genomic sequence (NC_004354).
On Jan 16, 2013 this sequence version replaced NM_001201651.1.
##Genome-Annotation-Data-START##
Annotation Provider :: FlyBase
Annotation Status :: Full annotation
Annotation Version :: Release 6.54
URL :: http://flybase.org
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..2945
/organism="Drosophila melanogaster"
/mol_type="mRNA"
/db_xref="taxon:7227"
/chromosome="X"
/genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2]
bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]"
gene 1..2945
/gene="Amun"
/locus_tag="Dmel_CG2446"
/gene_synonym="amun; anon-WO03040301.104;
anon-WO03040301.105; anon-WO03040301.107; CG2446;
Dmel\CG2446; EP1503"
/map="10D6-10D7"
/db_xref="FLYBASE:FBgn0030328"
/db_xref="GeneID:32123"
CDS 607..2259
/gene="Amun"
/locus_tag="Dmel_CG2446"
/gene_synonym="amun; anon-WO03040301.104;
anon-WO03040301.105; anon-WO03040301.107; CG2446;
Dmel\CG2446; EP1503"
/note="CG2446 gene product from transcript CG2446-RG;
CG2446-PG; Amun-PG"
/codon_start=1
/product="amun, isoform G"
/protein_id="NP_001188580.1"
/db_xref="FLYBASE:FBpp0292400"
/db_xref="GeneID:32123"
/db_xref="FLYBASE:FBgn0030328"
/translation="MSNGKATVSFFETGSTKQFEYCYQLYPQVLKLKAEKRCKKPQEL
IRLDQWYQNELPKLIKARGKDAHMVYDELVQSMKWKQSRGKFYPQLSYLVKVNTPRAV
IQETKKAFRKLPNLEQAITALSNLKGVGTTMASALLAAAAPDSAPFMADECLMAIPEI
EGIDYTTKEYLNFVNHIQATVERLNAEVGGDTPHWSPHRVELALWSHYVANDLSPEML
DDMPPPGSGASTGTGSLSTNGNSSKVLDGDDTNDGVGVDLDDESQGAGGRNTATESET
ENENTNPAALTPLQSGEAKNNAAAVGAALQDGDSNFVSNDSTSQEPIIDDNDGTTQTT
ATTSTEDGEPIALDIGIGIGSSGTPLASDSESNQEAPPKTNSLPILTPTQHSSQNQNQ
KQSPSQPHKTNNSITNNGQPAPLAEEEAVTAAPQPASKATAAPANGNGNGNGVLGDED
EDEAEDEEEDELDEEEDNEAELEADESNSSNGIVRDSKLQQLAANKAVDAVSPVAAGA
DSAPAIGQKRTALHCDMELKNAGGVGVGVGEKSPDLKKLRSE"
ORIGIN
1 ttcccgtcac acgagttagc agcacatcgc acagctgcat cgctccgctc cgatcctttt
61 taattttttg ttgtgccttc ggtggcgtgc tcatttcgag aacagagtaa ccccttttta
121 tttgtcagtt gtcaacggcg cccctgcagg cagaaagcag aaactgaaac agcagaggaa
181 gaagaagaag cagcacagca cgggcacagc acgaagcacg cagcacagca caagcacaga
241 ggcgaagcga agcaaagcaa agcagaggca acacagaaaa acagcaaagc attggagtag
301 ttgtttggat gtggacggaa aggaagactg gcggcgacta actaaaaggt atttgttgtt
361 cacccactca tctgtgtgcg tgcagtgcgc tagtgaaaag ctgttctcac cgtttgccaa
421 aaagacaaga gtacgttgac aggagcagct cggaacggac aggaaaagca ggagactaaa
481 caccagccgg tcacttgcgg atcagccaac gtcctgggcc ccaaggcgat agataccacg
541 ataaggagat acagcgatac caccaatcat tagcaggcga caacgacaca tccgcatccg
601 cagaagatgt ccaacggcaa ggcgacggtc tcgttcttcg agaccgggag caccaaacag
661 ttcgagtact gctaccagct ctatccccag gttcttaagc taaaggccga gaagcgctgc
721 aagaagccgc aagagctgat ccgcctggat cagtggtatc agaatgaact gcccaaattg
781 attaaggcac gcggcaagga cgcgcatatg gtatacgatg agctcgtcca gtcgatgaag
841 tggaagcagt cgcgcggcaa attctatccg cagctatcct acctggtcaa ggtcaacaca
901 ccgcgcgccg tcatccagga gacaaagaag gccttccgca agctgcccaa tctggagcag
961 gcgatcacag ctttatcgaa cctcaagggc gttggcacca caatggccag tgcactgctg
1021 gcagccgcag ctcccgattc ggcaccattc atggccgacg agtgcctgat ggccatacca
1081 gagatcgagg gcatcgatta caccaccaag gagtacctca acttcgtcaa tcacattcag
1141 gccaccgtgg agcgcctcaa tgcggaggtg ggcggggata cgccgcactg gtcgcctcat
1201 cgcgtggagc tggccctctg gtcacactat gtggccaatg atctcagtcc cgagatgctc
1261 gacgatatgc cgccgcctgg atccggcgcc tccactggca ccggttcact cagcacaaac
1321 ggcaacagca gcaaggtgct cgatggcgac gataccaacg atggtgtggg tgttgatttg
1381 gacgacgaaa gccaaggagc aggcggtcgc aacactgcta cagaatcgga gacagagaat
1441 gagaacacca acccggctgc tctgacgcct ctacagtcgg gcgaggccaa gaacaacgca
1501 gctgccgttg gcgccgccct gcaggacggt gactccaact ttgtttcgaa cgattccacc
1561 tcccaggagc cgatcatcga tgacaacgat ggcaccacac agacaacggc caccacttcc
1621 acagaggacg gtgagcccat cgccctagac attggcattg gcatcggttc gagtggaaca
1681 ccgctcgcct cggactctga aagcaatcag gaggcgccgc ccaagaccaa cagcctgccc
1741 atcctgactc ccacacagca ctcgagccag aatcagaatc aaaagcagtc gccgagccag
1801 ccccacaaaa ctaacaattc gatcaccaac aacggtcagc ctgctccttt ggcagaagag
1861 gaagcggtta cagcagcacc acagccagcc agcaaagcga ctgcagcacc agccaatgga
1921 aatggtaacg ggaacggcgt cctgggcgac gaggatgagg atgaggcgga ggacgaggag
1981 gaagatgagc tggacgagga ggaggataat gaggcggagc tagaggctga cgagagcaat
2041 agcagcaacg gcattgtgag ggacagtaaa ctgcagcagc tggcggcgaa caaggcggtg
2101 gatgcggttt caccggtagc agcgggtgca gactcggcac cagccattgg acagaagcgt
2161 actgccctgc actgcgatat ggagctgaag aacgccggcg gagtgggtgt gggcgtgggg
2221 gagaagtcac cggatctaaa gaaactgcgc agcgaatgag gcggaggtga ggaaacgaaa
2281 tacggatacg gatgcggatg cgggtcagaa acggggatcg gttcggctcg gcacgtttcg
2341 gttcgccgcg tatccggtgg aaagacatat gtatgtagtg cagttgagtc gacatagaga
2401 catagagcaa cattacctac actttaccac aacaacattc aagaaattct actattaagc
2461 aactaactat acatacatat aatatattat atatatatat atatacacat atatatatat
2521 atatatacaa catataacga gatgcgaaca cccaacacac tccactctca tacacacaac
2581 acagacacac acaacccgac ataacatgaa cataaccgat cagatcagag cggaatatag
2641 gatcccgatc cagaaggcag taagcagcac cacaaacaac atttcaatag catagaaagc
2701 gcgccaagat gaagaatcag aagaatccga tcaagaatcc gaagaacaag cagcagaatc
2761 agcagcaaca gagagttcag aatgcagcgt taacgtaatt taactaaaac gaaaagcaaa
2821 tgcatacatg aatagtaact acaaaacaag atcagatgga aatcgatatt tttacacagt
2881 caaaaggaac atttaaatat aaagaaattt acaaatgccg cagttgccca ctacatacaa
2941 aaaac
//