Dbfetch
LOCUS NM_001136415 1674 bp mRNA linear INV 22-NOV-2023 DEFINITION Caenorhabditis elegans O-phosphoseryl-tRNA(Sec) selenium transferase (secs-1), partial mRNA. ACCESSION NM_001136415 VERSION NM_001136415.3 DBLINK BioProject: PRJNA158 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 1674) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 1674) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 1674) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 1674) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003283). On Apr 15, 2020 this sequence version replaced NM_001136415.2. COMPLETENESS: incomplete on the 5' end. FEATURES Location/Qualifiers source 1..1674 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="V" gene <1..1674 /gene="secs-1" /locus_tag="CELE_D1054.13" /db_xref="GeneID:179498" /db_xref="WormBase:WBGene00008379" CDS 1..1572 /gene="secs-1" /locus_tag="CELE_D1054.13" /standard_name="D1054.13b" /note="Confirmed by transcript evidence" /codon_start=1 /product="O-phosphoseryl-tRNA(Sec) selenium transferase" /protein_id="NP_001129887.1" /db_xref="EnsemblGenomes-Gn:WBGene00008379" /db_xref="EnsemblGenomes-Tr:D1054.13a" /db_xref="EnsemblGenomes-Tr:D1054.13b" /db_xref="GeneID:179498" /db_xref="WormBase:WBGene00008379" /translation="MSFEKLLMNLPGHTECACLPLCVDCQSRVDDCVSGRTARSEDMK ANFGKKEGEYSRLVSKSSNKLLNSLWEKKQIPEEGWSEHTLDLFLSWLSSHDTNNRVD MIPVGAGEREGRVLTPLVQRLHSNLTHGIGRSGNLLEIQPKALGSSMLACLSNEFAKH ALHLLGLHAVKSCIVVPLCTGMSLSLCMTSWRRRRPKAKYVVWLRIDQKSSLKSIYHA GFEPIIVEPIRDRDSLITDVETVNRIIEQRGEEILCVMTTTSCFAPRSPDNVEAISAI CAAHDVPHLVNNAYGLQSEETIRKIAAAHECGRVDAVVQSLDKNFQVPVGGAVIAAFK QNHIQSIAQSYPGRASSVPSRDLVLTLLYQGQSAFLEPFGKQKQMFLKMRRKLISFAE NIGECVYEVPENEISSAMTLSTIPPAKQTLFGSILFAKGITGARVVTSSQSKTTIEGC EFINFGSHTTEQHGGYLNIACSVGMTDHELEELFTRLTSSYAKFVRELAKEDERINSS GRRIPINESFDMEND" ORIGIN 1 atgtcattcg aaaaacttct gatgaatctt cccgggcata cagaatgcgc gtgtcttcct 61 ctttgcgtag attgccagtc tcgtgtcgat gactgtgtca gtggaagaac tgcaagaagt 121 gaggacatga aagcaaattt tggaaaaaaa gaaggtgaat attctagatt ggtgagcaaa 181 tcaagcaata aattgctcaa ttctttatgg gaaaagaaac aaatcccgga agaaggatgg 241 tcagagcata cactggattt gtttttatca tggttgtcat ctcatgacac gaacaataga 301 gtggatatga ttccagttgg tgctggcgaa agagaaggtc gtgtcttaac cccattagtt 361 caacgtttac attcaaattt gacacatggc attggaagaa gtggaaacct gctggaaatc 421 caaccaaaag ctttgggatc ttctatgctt gcatgtctct caaatgagtt tgcaaaacat 481 gcacttcatc tcctaggtct gcacgcagtg aaatcttgca ttgttgtacc cctttgcact 541 ggaatgtcgc tttctctttg tatgacatcg tggagacgac gtcgtccgaa agcaaagtac 601 gtcgtttggc tgcgaattga tcaaaaatct tcactgaaaa gcatttatca tgctggattc 661 gaaccaataa ttgtagaacc aattcgagat cgagattcac ttattacgga tgtcgaaact 721 gtcaaccgaa taattgaaca aagaggcgaa gagatactgt gtgtaatgac aactacgtca 781 tgttttgctc cgcgttctcc agataatgtc gaagcgattt ctgcaatttg tgctgctcat 841 gatgtcccac atctagtcaa taatgcatat gggcttcaaa gcgaagaaac tattcgaaag 901 atcgccgcag ctcacgaatg tggacgtgtt gatgctgttg tccagtcact agacaagaat 961 tttcaagttc cagtaggagg agctgtaatt gctgctttca aacaaaatca tatacaatca 1021 attgcacagt catatccagg aagagcttct tctgttcctt caagagatct cgttctcact 1081 ctactgtacc aaggacagtc ggcattctta gaaccttttg gtaaacagaa acaaatgttc 1141 ttgaaaatgc gccggaagct tatatctttc gcagaaaata ttggtgaatg tgtatatgag 1201 gttccggaaa atgagatcag ctcggcaatg accctgtcca cgattcctcc agcaaagcaa 1261 acattgttcg gatctattct ctttgcaaaa ggaatcaccg gtgccagggt agtcacatcc 1321 agccaatcaa aaaccacgat agaaggatgc gaattcatca attttggttc tcatacaacc 1381 gaacaacatg gtggatattt gaatattgcg tgctctgttg gaatgacgga tcatgaatta 1441 gaggaactgt tcacaagatt gacctctagt tatgctaagt ttgtgcggga acttgcaaaa 1501 gaagatgaac gaatcaattc ttcaggacgg aggatcccga tcaacgaatc atttgatatg 1561 gaaaatgatt aatcaatctt taaattttat agtcttcttt ttgaacgggt tttatgttta 1621 aacgaactca tttacatttt tctttttcta taaagttaaa attaagaatt ataa //