Dbfetch
LOCUS NM_001085023 1837 bp mRNA linear PLN 20-OCT-2022 DEFINITION Arabidopsis thaliana Protein kinase superfamily protein (AT4G35030), mRNA. ACCESSION NM_001085023 VERSION NM_001085023.2 DBLINK BioProject: PRJNA116 BioSample: SAMN03081427 KEYWORDS RefSeq. SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 1837) AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G., Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N., Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M., Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R., Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M., Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M., Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W., Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L., Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J., Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I., Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U., Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M., Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C., Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J., Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S., Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A., Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D., Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S., Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O., Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S., Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F., Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T., Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A., Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D., Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P., Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W., Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M., Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E., Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M., Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G., Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A., Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N., Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M., Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S., Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K., Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C., Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D., Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A., Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N., Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M., Martienssen,R. and McCombie,W.R. TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana JOURNAL Nature 402 (6763), 769-777 (1999) PUBMED 10617198 REFERENCE 2 (bases 1 to 1837) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 1837) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter REFERENCE 4 (bases 1 to 1837) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003075). On Sep 12, 2016 this sequence version replaced NM_001085023.1. FEATURES Location/Qualifiers source 1..1837 /organism="Arabidopsis thaliana" /mol_type="mRNA" /db_xref="taxon:3702" /chromosome="4" /ecotype="Columbia" gene 1..1837 /locus_tag="AT4G35030" /gene_synonym="M4E13.90; M4E13_90" /db_xref="Araport:AT4G35030" /db_xref="GeneID:829655" /db_xref="TAIR:AT4G35030" CDS 269..1408 /locus_tag="AT4G35030" /gene_synonym="M4E13.90; M4E13_90" /inference="Similar to RNA sequence, EST:INSD:AU236300.1,INSD:BP574970.1,INSD:AU227182.1, INSD:BE038520.1" /note="Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT2G16750.1); Has 111319 Blast hits to 110316 proteins in 3687 species: Archae - 96; Bacteria - 13135; Metazoa - 40291; Fungi - 8843; Plants - 32304; Viruses - 365; Other Eukaryotes - 16285 (source: NCBI BLink)." /codon_start=1 /product="Protein kinase superfamily protein" /protein_id="NP_001078492.1" /db_xref="GeneID:829655" /db_xref="TAIR:AT4G35030" /db_xref="Araport:AT4G35030" /translation="MGEEKRRISGRSVSLPSIDILLDEKPGWPFLKRASLGTPQQVHK WHTRKVSVVNWVMSLPERFPNHQQTLNYETSLIKKQIKDILRDNNKWFNYNVLRKATS DFSQENVIGKGGCNEVYRGILEDGKGIAVKILKSSSKEAMTNFVHEINIISSLSHQNI SPLLGVCVQDNELISVYNLSNTGSLEETLHGKQKGKYVLSWEERFKIAIGLAEALDYL HNRCSKPVIHRDVKTSNVLLSLELQPQLSDFGLSMWGPTTSSRYSIQGDVVGTFGYLA PEYFMYGKVSDKVDVYAFGVVLLELISGRNPISPQNPRGQESLVMWAKPLIDTGNLKV LLDPDVTDIFDESQFQRMVLAASHCLTRSATHRPNIRQVRFCFIP" ORIGIN 1 aatgctgatg gtacatggcg gcagattttc gattcttatt atttaaagac caaatttaat 61 aatagatgta tgtacaacga gttttggtat cactatcttg tccggtaatg ctcattgttt 121 atcttttaaa tctacgtctt cttctgcata attgacacaa atcacttgtt tcaatggagt 181 ttttgtttgt ttgatttcct ctgttactta tgcagcaaaa gaagaaattg agtttaaagg 241 agaagtgtga gaaggaagtt tcaggaagat gggtgaagaa aagaggagaa tttcaggaag 301 atcagtttca cttccatcga tagacatatt actagacgag aaaccaggtt ggccatttct 361 taaaagagca agtttaggga caccacaaca agttcacaaa tggcacacac gaaaagtctc 421 agtggtcaat tgggtcatga gcttacctga acggtttcca aatcatcaac agactctaaa 481 ctatgagaca agcttgataa agaaacaaat caaggacata ttgagagaca ataacaaatg 541 gttcaactac aatgttctta ggaaagcaac atcagatttc tctcaagaga atgtgattgg 601 gaaaggagga tgcaacgaag tgtaccgagg gattcttgaa gatggaaaag gcattgcagt 661 gaaaatcttg aagtcatcat ctaaagaagc aatgacaaat ttcgttcatg aaatcaacat 721 tatctcttct ttgagtcacc aaaacatctc accgttactt ggtgtttgtg tccaagacaa 781 tgaactaatc tccgtttaca atctttcaaa cacaggaagt ttagaagaaa cccttcacgg 841 taagcaaaag ggaaagtatg tattatcatg ggaagagaga ttcaagatag ctatcgggtt 901 ggcggaagca ttagactatc ttcataaccg atgttctaag ccagtgattc atagagatgt 961 caaaacttct aacgtccttc tatcacttga gctccaacct cagctgtcag attttggtct 1021 gtcgatgtgg ggaccgacaa catcttctcg atattcgata caaggtgatg tggtgggaac 1081 atttggatat cttgcaccgg agtacttcat gtatggaaaa gtcagtgata aagttgatgt 1141 ttacgccttt ggagtggttc tgcttgaact catttctgga agaaatccta tttcacctca 1201 gaatcctaga ggacaagaga gtttggtaat gtgggcaaag cctttgattg ataccggaaa 1261 tttaaaagta ctgttggatc cagacgttac agatatattc gacgagtctc agtttcaaag 1321 aatggtactt gctgcttcac attgcctcac aagatcagcc acacatcgtc ccaatataag 1381 acaagtaaga ttttgtttca ttccttaaga aagctaagtc cctcatgcaa gaactaatct 1441 ttaacgtttc ttcagatact gaggctacta agagatgaaa acgaagccgg gaaatggatt 1501 atggaagaag aaggaaatga agattgcttc gatgacgagg tttacccgaa ttccagcaca 1561 gaattacact taaaccttgc gatgcttgag gtggaagacg atgaaactgc atcaatcagc 1621 agcatggaga gaagtaacaa cagccttttt tcttctactt gttcatctag ggagcttcaa 1681 acataaggaa ttatgctttt agctaataga gaggttaggt acttaggtta gaggtttgtt 1741 tcttagtgta tggagtttac ttgataactt tatgttagac ctgagctccc tgctgttatc 1801 tggaccagaa aattcattcc caagacgaat cattctc //