Dbfetch
LOCUS NM_001047583 2847 bp mRNA linear INV 22-NOV-2023 DEFINITION Caenorhabditis elegans SH3 domain-containing protein (eps-8), mRNA. ACCESSION NM_001047583 VERSION NM_001047583.7 DBLINK BioProject: PRJNA158 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 2847) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 2847) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 2847) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 2847) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003282). On May 27, 2020 this sequence version replaced NM_001047583.6. FEATURES Location/Qualifiers source 1..2847 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="IV" gene 1..2847 /gene="eps-8" /locus_tag="CELE_Y57G11C.24" /db_xref="GeneID:178411" /db_xref="WormBase:WBGene00001330" CDS 83..2305 /gene="eps-8" /locus_tag="CELE_Y57G11C.24" /standard_name="Y57G11C.24h" /note="Confirmed by transcript evidence" /codon_start=1 /product="SH3 domain-containing protein" /protein_id="NP_001041048.1" /db_xref="EnsemblGenomes-Gn:WBGene00001330" /db_xref="EnsemblGenomes-Tr:Y57G11C.24h" /db_xref="GeneID:178411" /db_xref="GOA:G5EFE0" /db_xref="InterPro:IPR001452" /db_xref="InterPro:IPR006020" /db_xref="InterPro:IPR011993" /db_xref="InterPro:IPR013625" /db_xref="InterPro:IPR033928" /db_xref="InterPro:IPR035462" /db_xref="InterPro:IPR036028" /db_xref="InterPro:IPR039801" /db_xref="UniProtKB/TrEMBL:G5EFE0" /db_xref="WormBase:WBGene00001330" /translation="MRRGGSMGPPSGDPYQSRPSPGGYYYNRSTPGGQPAPSPSHSQQ SASSHHPRGVPMSQPIARRSDYRTGSEQMTPRSDHRGPSMGYGNGGSVDQRVDDVTPS YYVEHLATFAVGRQFGLTFPADGIRKLKQMEKNSAIWAQPLILRFRHNAVTVEDDNGE LVEQFPLELIEQPTAHVSNDSRETYNNVLLFVVREDRKRMSTPTEMHIFQCIRVSATD VAEDLKNYVQGQFRRVRNGRRTAAPTHLQAQQQQMPFYPPDDASISSETSEMFERDVN TLNRCFDDIERFVARIQSAALAQREIEQQNHRYRTANRRDKKNQQPPDPNGILFMRAQ LPLESEFVDILKKFKLSFNLLAKLKNHIHEPNAPELLHFLFTPLAVILEACHWGLGRN VAPTVASPLLSLEARELMQNCLTSHESDIWMSLGEAWRTPPEDWTKPLPPPYRPIFND GFAPYGVADRAMATPNQIHRGHSAPPEHFRQPPPRERNMVDTAPNTPQSMQRTPKSRP PHRNMSVDNLEFDRLTLERERLEFEKAKIMERESRLRHEEKQIEDEKRRMHAEKDLIT KETTQPVPPPAAVVTHQPITKRYDPPISISPPPQRNNYSHVKVTVDSDTSPRQQAFID DIVAKGGKLAVVTYDRGGQNTKELTVHKGEYLEVIFDERNWWECKNMHQRVGYVPHTI LSMVPFEQQQYASPNHHNNSSSTGGYNNGHHQGPGMLPEDAPSYVKERQGKRGEFRYF " ORIGIN 1 tttcagccag tcaaatgcca tttgcttaaa aagcgaggaa atttatcatc agtgaagaag 61 tgtaaaacat ctattaaaaa tgatgcgtcg aggtggatcg atgggtccac cgagcgggga 121 tccatatcag agtcgcccat cccccggagg ctactactac aaccgttcaa cgcctggtgg 181 tcagccagct ccatcaccct cacacagtca acaatccgca tcttcacatc atccaagagg 241 agtgccaatg tcacaaccaa tcgcccgccg atcggactac cgtactggaa gtgaacaaat 301 gactccacga tccgatcatc gtggcccatc gatgggttac ggtaatgggg gttctgtgga 361 tcaacgtgtc gatgacgtca cgccgtccta ctacgtggaa catcttgcca cgtttgcagt 421 tggaagacag tttggactca cttttccagc cgatggcatc agaaagttga aacaaatgga 481 aaagaattca gccatttggg cgcaacctct aattcttcgg tttcgacaca acgcagtgac 541 ggtagaagac gacaacgggg agctcgtcga gcaatttccg ttggaattaa tcgagcagcc 601 gacggctcac gtgagcaatg attctcgtga gacttacaac aatgtgctcc tttttgttgt 661 ccgggaggac cggaagagga tgagcacgcc caccgagatg cacattttcc agtgtatccg 721 tgtatccgct accgatgtgg ccgaggacct caaaaactac gtacaaggtc aattccgtcg 781 tgtgcgtaat ggccgacgta ccgccgcgcc gacgcatctt caagctcaac aacaacaaat 841 gccattctac ccaccggacg acgcttcaat cagcagtgaa acatctgaaa tgttcgaacg 901 agatgtgaat acactgaatc gttgtttcga tgatatcgaa cgatttgtgg cgagaattca 961 atcggccgca ctggctcagc gagaaattga gcaacagaat catagatatc gaaccgcgaa 1021 tcgtcgggac aagaagaacc agcagccacc agatccgaat ggcatcctat ttatgagagc 1081 tcaacttcca ttggagtctg aatttgtcga tattttgaag aagttcaagc tctcctttaa 1141 tctactggcc aaactcaaaa accacatcca cgagccaaat gctccggaac ttttgcactt 1201 tctcttcacg ccactagctg tgatccttga agcatgccac tgggggctcg gaagaaatgt 1261 tgctccaact gttgcctcgc cgctgctctc gttggaagct cgtgagctca tgcaaaactg 1321 tttgacaagt catgagagtg acatttggat gagcctcgga gaagcctgga gaactccacc 1381 agaggactgg acaaaaccac ttccaccacc atatcgtcca atcttcaatg atgggtttgc 1441 cccttacggg gtcgccgaca gagccatggc aactccaaat caaatccatc gtggacattc 1501 tgctccgcca gagcacttcc gtcagccacc gcccagagag aggaatatgg tggatacggc 1561 tccgaatact ccacaatcaa tgcaacgaac accaaaatcc cggccaccac acaggaacat 1621 gagtgtagac aatctcgaat tcgatcgatt aactctggaa cgcgagcgac tcgaatttga 1681 aaaggcaaag attatggaaa gggagagtcg tttgaggcat gaggagaagc agattgaaga 1741 tgaaaagcga cgaatgcacg ccgagaagga tctcatcaca aaagagacaa cacaaccagt 1801 tccaccacca gctgcagtcg ttacacatca accaatcacc aagcgatatg atccaccaat 1861 ttccatctct ccaccaccac aacgtaacaa ctattcacac gtgaaggtta ctgtagattc 1921 tgacacatcg ccacgtcagc aggcattcat tgatgacatc gtggcaaaag gtggcaagtt 1981 ggcagtggtc acctatgata gaggaggtca gaatacgaag gagctgactg ttcacaaggg 2041 ggagtatttg gaggttatct tcgacgagcg caactggtgg gagtgcaaga atatgcatca 2101 aagagtcgga tacgttccac acacaatttt gtcaatggtg ccatttgagc aacaacaata 2161 tgcgtcacca aaccatcaca acaattcctc atcaaccggt ggctacaaca acggacatca 2221 tcaaggccca ggtatgcttc cagaagacgc gccatcctat gtcaaagaac gacagggtaa 2281 acgtggcgag tttcgatatt tctgatcaat tatcgattga tttctttctt tctatgctta 2341 tttcccccgt ttagtgtgcc attgtattta tacgcttctt attcttccct ttgtcttctg 2401 tttcaatgtt tagtaaaaaa tatatatttt attcaattca aattcaaatt caaaaaattg 2461 ccaaaatgca tgtttccttc ctgtttttcg tacattattt gctcaaaaaa tcatcacttc 2521 acccaaaaaa tttcgcgttt ttcatttcaa aacccctatt cccacacatt caacattgtc 2581 tcgtctttgt ttcagttcac ttttcccttc gataaataca atttctcaat ttatctaact 2641 tatctgattt gtgatatttt actactatat acaacgttga aaaatttcta tatagatccg 2701 tgttattttt tttcgctatt ttttcgatat gatgtgatat tatatattcc aatttctttt 2761 taattctcat gttaaataat aaatcataaa ttatttgact ttacctttgt ttgtgtacat 2821 gtctatgaaa tatgaaagct tggaaat //