Dbfetch
LOCUS NM_001047463 2134 bp mRNA linear INV 22-NOV-2023 DEFINITION Caenorhabditis elegans Leucine-rich repeat-containing protein 34 (C48D1.1), partial mRNA. ACCESSION NM_001047463 VERSION NM_001047463.3 DBLINK BioProject: PRJNA158 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 2134) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 2134) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 2134) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 2134) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003282). On Sep 4, 2019 this sequence version replaced NM_001047463.2. COMPLETENESS: incomplete on the 5' end. FEATURES Location/Qualifiers source 1..2134 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="IV" gene <1..2134 /gene="C48D1.1" /locus_tag="CELE_C48D1.1" /db_xref="GeneID:178271" /db_xref="WormBase:WBGene00008177" CDS 1..1899 /gene="C48D1.1" /locus_tag="CELE_C48D1.1" /standard_name="C48D1.1a" /note="Confirmed by transcript evidence" /codon_start=1 /product="Leucine-rich repeat-containing protein 34" /protein_id="NP_001040928.2" /db_xref="EnsemblGenomes-Gn:WBGene00008177" /db_xref="EnsemblGenomes-Tr:C48D1.1a" /db_xref="GeneID:178271" /db_xref="GOA:O02227" /db_xref="InterPro:IPR001611" /db_xref="InterPro:IPR016024" /db_xref="InterPro:IPR032675" /db_xref="UniProtKB/TrEMBL:O02227" /db_xref="WormBase:WBGene00008177" /translation="MTKPLHDIACQKIAEFVQNGSYDNREFELDSKSSNIVYSYLMNR DKPFNLKTIHKLNVTKVTLHPQTLDENTARQLKQFSLKELKIGNFSKSKSWCIFRRKE TRHVDIVRILEAVLNEETRKNLQYLHIEKDQKLMKRWTAKIGNMLPSLTHLTMSDVHI NEDDFYQLFGNFSNLRSLDISGTNILNIAGISRLKQLEVLALRDFSIATYTELKDLFN LKHLRVLDVSQTRFNLHSRNNIVEQFTECKMELPELRFMDCTRTSLSGDILECLLKTQ RNLQLVTTIMTEAETSQYNDVRVLNTAYFHKSVQALVYCLTARKEFDSGYCMKAIRIS ISEDNLQNLNIPSCIKTIVKSMQTFDSISVTQNGLKCLIIFGMLYSNQLCSNGVTLLV EALMSFVYLYKRMISEAYVKVNISYWNAVEKLVNLKLGKLDFDKISKTAMSFLLENRV SKALRTRASSVLCQCIHRMHSDELKSLSEKTENVNRLVDILEWSVGQKNETKLSEFFE ITIKMTEKSSKACTNMIQAGIISISLSCMEKVESNDITTKCLELLTNLSSALNYDSLQ ELYTSSNVDKIGLMLTRQKNDITFQTTSLLTKLLHHAEGNQVQYKLINQLLAESNRLA IGIDKIHI" ORIGIN 1 atgaccaagc ctcttcatga cattgcctgc caaaaaattg ccgaattcgt tcaaaatggt 61 tcatacgata acagagaatt tgaacttgat tccaaatcga gtaacattgt ttattcatat 121 ttaatgaatc gagataaacc attcaattta aaaaccatcc ataaactgaa cgtaacaaaa 181 gttacactac acccccagac actggatgag aacactgcaa ggcaactgaa acaattctcg 241 ttgaaagaat tgaaaattgg aaatttttct aaatctaaaa gttggtgcat atttagaaga 301 aaagaaaccc gtcatgttga tattgtccgc attttggaag ctgttctgaa cgaggaaacc 361 cgtaaaaatc ttcagtactt acacatcgaa aaagatcaaa aactaatgaa aagatggact 421 gcaaagattg gaaacatgtt accatcacta acacatttaa ctatgagcga tgttcatatc 481 aatgaagatg atttctatca acttttcggt aatttttcaa atcttcggtc attggatatc 541 agtggaacca atatcttaaa cattgccggt atttcgagat taaaacaact ggaagtgctc 601 gctctgagag atttttcaat tgccacatat acggagctta aagatttatt taacttaaaa 661 cacctgaggg tcttggatgt atcacaaaca agatttaatc tccattctag aaataatatt 721 gtcgagcagt tcacagaatg taaaatggaa ttaccagagt taagattcat ggattgtacc 781 agaacctcgt tgagcggtga cattttagag tgtttactaa aaacgcaacg taatcttcag 841 ttagttacaa caataatgac tgaagcggaa acatcacaat ataatgatgt tcgggttttg 901 aatactgcat actttcataa atctgttcaa gctctagttt actgtttaac tgcaagaaaa 961 gaatttgaca gtggatactg tatgaaagca atcagaattt caatctctga agataacttg 1021 caaaatctca atattccttc atgtataaaa acaattgtaa aatcaatgca aacgtttgat 1081 tcaatatctg ttacgcaaaa tgggctcaag tgtttgataa tattcggaat gctctattcc 1141 aaccaactgt gttcaaacgg agtgacgtta ttggttgaag ctttaatgag cttcgtttat 1201 ttgtacaaaa ggatgatttc agaagcatac gtaaaagtca atatttccta ctggaatgcc 1261 gtcgagaaac ttgtaaattt gaaattggga aaactcgatt ttgataaaat aagcaaaacc 1321 gctatgagtt ttctattaga gaatcgagta agcaaggctc ttcgtaccag agcatcaagt 1381 gttttgtgcc agtgcataca tagaatgcat tctgatgaat taaaatctct atctgaaaaa 1441 actgagaatg tgaatcgatt agtcgatata ctggaatgga gtgtaggaca gaaaaatgaa 1501 acgaagcttt cggaattttt tgaaatcact atcaaaatga ctgaaaaaag ttcaaaggct 1561 tgtaccaaca tgatacaagc tggaataata agtatttcat tgagttgcat ggaaaaggtt 1621 gagtctaatg atattactac gaaatgcttg gagttgttaa caaatctgtc atccgctctg 1681 aattatgact ctttgcaaga actctacaca tcatcaaatg tcgataagat tgggctaatg 1741 cttactcgac agaaaaatga cataacgttc caaactactt cattgctcac aaaactattg 1801 caccacgctg aagggaacca ggttcaatat aaactcatca atcagttact ggctgaaagt 1861 aatcgcttag caattggaat tgacaagatt catatttgaa aaattctttg aaaagtgcca 1921 aacaaatttg ttctattaaa agttcccatt aaaaaacccc aatcaaattt ccctaataca 1981 ttacaaatga ccctattgca tcattcctca actgttcaga agttagggct ctttacggtt 2041 tttgaaaact tgtttctttt atgtaaactt gcatgtttga atctttctct gttcctgatt 2101 aaaaatcaac tcagtttcat aaatcttaaa ccac //