Dbfetch
LOCUS NM_001028721 1576 bp mRNA linear INV 22-NOV-2023 DEFINITION Caenorhabditis elegans Hypoxia-inducible factor 1 (hif-1), partial mRNA. ACCESSION NM_001028721 VERSION NM_001028721.6 DBLINK BioProject: PRJNA158 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 1576) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 1576) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 1576) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 1576) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003283). On Feb 2, 2021 this sequence version replaced NM_001028721.5. COMPLETENESS: incomplete on the 3' end. FEATURES Location/Qualifiers source 1..1576 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="V" gene 1..>1576 /gene="hif-1" /locus_tag="CELE_F38A6.3" /db_xref="GeneID:180359" /db_xref="WormBase:WBGene00001851" CDS 65..1576 /gene="hif-1" /locus_tag="CELE_F38A6.3" /standard_name="F38A6.3c" /note="Partially confirmed by transcript evidence" /codon_start=1 /product="Hypoxia-inducible factor 1" /protein_id="NP_001023892.1" /db_xref="EnsemblGenomes-Gn:WBGene00001851" /db_xref="GeneID:180359" /db_xref="WormBase:WBGene00001851" /translation="MSRDSEYLDRKYTESPMGAFTTRHTCDMRITFVSDKFNYILKSE LKTLMGTSFYELVHPADMMIVSKSMKELFAKGHIRTPYYRLIAANDTLAWIQTEATTI THTTKGQKGQYVICVHYVLGIQGAEESLVVCTDSMPAGMQVDIKKEVDDTRDYIGRQP EIVECVDFTPLIEPEDPFDTVIEPVVGGEEPVKQADMGARKNSYDDVLQWLFRDQPSS PPPARYRSADRFRTTEPSNFGSALASPDFMDSSSRTSRPKTSYGRRAQSQGSRTTGSS STSASATLPHSANYSPLAEGISQCGLNSPPSIKSGQVVYGDARSMGRSCDPSDSSRRF SALSPSDTLNVSSTRGINPVIGSNDVFSTMPFADSIAIAERIDSSPTLTSGEPILCDD LQWEEPDLSCLAPFVDTYDMMQMDEGLPPELQALYDLPDFTPAVPQAPAARPVHIDRS PPAKRMHQSGPSDLDFMYTQHYQPFQQDETYWQGQQQQNEQQPSSYSPFPMLS" ORIGIN 1 gaagcagaag agaaaacgga gaagatgtta catcttgtat tgctgctccg tttgcaaaag 61 taaaatgagc agggactctg aatacctaga tagaaaatac acggaaagcc caatgggtgc 121 attcacaact cgtcacactt gcgacatgcg catcactttc gtttcggata agttcaatta 181 catcttgaaa agtgagctga agactctcat gggcaccagt ttctacgaat tggtacatcc 241 agccgatatg atgatagtat caaaatccat gaaggaactt tttgccaaag gacacatccg 301 taccccgtat taccggttga ttgctgcaaa tgacacactt gcctggattc aaacagaagc 361 tactacaatc acacatacga cgaaaggaca aaaaggacaa tatgtcattt gtgttcatta 421 cgttctcgga atccaaggag ctgaagagtc attggtagtt tgcactgatt caatgccagc 481 tggaatgcaa gtagatatca agaaggaagt ggatgataca agagactata ttggaagaca 541 acctgaaatt gtggaatgcg tcgattttac tccattgatc gagccagaag atccatttga 601 tacggttatt gagccagtcg ttggtggaga agaacctgtt aagcaggctg atatgggagc 661 acgtaagaac agctacgatg acgttttgca atggcttttt cgcgaccagc caagctctcc 721 gccgccggca cgctaccggt cagcggaccg cttcaggaca accgaaccgt cgaatttcgg 781 ttccgctctg gcctcgccgg acttcatgga ttcgtcatct cgtacctccc gaccgaagac 841 atcatacgga cgaagagcac aaagtcaggg aagtcgaaca actggatcgt cttccacgtc 901 agcatcggcc acattgccac acagtgccaa ctactcgcca cttgcagagg gcatctcaca 961 atgtggactt aacagtcccc cgagtatcaa atctggacaa gtcgtgtacg gagacgctcg 1021 atctatggga cgtagctgcg atccgtccga ttcgtcacga cgcttttccg ccctttcacc 1081 atcagatact ctcaatgtgt cgtccactag aggcatcaac ccagtcatcg gaagcaatga 1141 tgtgttctcc actatgcctt ttgccgattc tatcgccatt gccgaaagga tcgattcgtc 1201 gccaacatta acctctggcg aaccaatact ttgtgacgat cttcaatggg aagagcctga 1261 tttatcgtgc ttggcaccat tcgttgacac ttatgatatg atgcaaatgg acgaggggtt 1321 accaccagag cttcaagctc tttacgactt gcctgacttt acacctgcgg tacctcaagc 1381 cccagctgct cggcctgtgc acattgacag aagcccacca gcgaagcgaa tgcaccaatc 1441 aggtccctca gatttagatt ttatgtacac tcaacattat caaccattcc aacaagacga 1501 gacatattgg caaggacagc aacagcaaaa tgaacaacag cctagttctt attccccatt 1561 tccaatgctc tcttga //