Dbfetch
LOCUS NM_001027298 2595 bp mRNA linear INV 22-NOV-2023 DEFINITION Caenorhabditis elegans Eukaryotic translation initiation factor 3 subunit B (eif-3.B), mRNA. ACCESSION NM_001027298 VERSION NM_001027298.8 DBLINK BioProject: PRJNA158 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 2595) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 2595) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 2595) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 2595) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003280). On Feb 2, 2021 this sequence version replaced NM_001027298.7. FEATURES Location/Qualifiers source 1..2595 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="II" gene 1..2595 /gene="eif-3.B" /locus_tag="CELE_Y54E2A.11" /db_xref="GeneID:175138" /db_xref="WormBase:WBGene00001225" CDS 26..2203 /gene="eif-3.B" /locus_tag="CELE_Y54E2A.11" /standard_name="Y54E2A.11" /note="Confirmed by transcript evidence" /codon_start=1 /product="Eukaryotic translation initiation factor 3 subunit B" /protein_id="NP_001022469.2" /db_xref="EnsemblGenomes-Gn:WBGene00001225" /db_xref="GeneID:175138" /db_xref="GOA:Q9XWI6" /db_xref="InterPro:IPR011042" /db_xref="InterPro:IPR011400" /db_xref="InterPro:IPR012677" /db_xref="InterPro:IPR013979" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR034363" /db_xref="UniProtKB/Swiss-Prot:Q9XWI6" /db_xref="WormBase:WBGene00001225" /translation="MVEIDFNKENEEDFSDPPGFVDDVTDDVLVPDVLHKKPTIDEFE DNCVFIAGIPVVGADRLGKLQSVLKKVLERLDPAVKLYIPPSPEGGCLGVLLTEWADQ RSAQFAVKSLNGYAFDKNHTFTARSFKDMKQLEAPSDHWTTPEKQAYNDVGDLWWWLQ NERCRDQFAISHDKLGVPTVGVFTNMKGNDPELAGDADKAERANWTETVFTWSPHGSY LSTIHKQGIILWGGKDYARAHRFAHTNVQYIDFSPCETYLVTYAAPEESNSWGDCEKD SLRIWDVRTGELKKAFSTFELTGRTQLPTWPFFRWSFDEKYFACLKAPEKDKLEREQK INGISIFESEKFELYEGRPVNIENIKQFEWSPTSTVLAYYSECTDAVPAEFGLLQVPS MQRLRSARVHNVADAQMFWQKSGKRLAFYTMRFKKKEYRETGEVKYVGGCQYHVDIFE IDKKDVSLMNLPLSEPFIHFDWDPEGDKFCVLVGNTAKATPQVYKIEANSHAPKLVSK LDAGVHFNEVQFAPKGGWLAVLAKVSAGGNVYFIDTSLSEAKRTNVIEHPLFNKGYWD PTGRYFVTCSTLGGRAGADLGYRIFTFQGRELCRKNLDRLAQFKWRPRPPVKLSEQKQ REIKKNLKKTAAKFIKQDDDEKCRASQEVVEKRRKIMAAFDIIRSRNREQLDATRDER ISLRNGVDTEAQLDEDEFVDEEITIALSTSKTQAPLTEEEMRD" ORIGIN 1 tttcagacta gttgggttac acagaatggt cgaaattgac tttaataaag agaacgaaga 61 agatttttcg gatccgccag gatttgttga cgacgtcacc gatgatgttc tcgttcctga 121 cgttctccac aagaaaccaa ctatcgatga atttgaagac aattgcgtct tcatcgcggg 181 aatcccagtt gttggagctg accgtcttgg aaaactccaa agtgtactga agaaggttct 241 ggagaggttg gatcctgcag tgaagctcta cattccgcca agtccagaag gaggttgctt 301 gggagttctg ctcaccgagt gggccgatca acgatccgct cagttcgccg tgaaaagttt 361 gaatggatat gctttcgata agaatcacac attcaccgcc cgttctttca aggatatgaa 421 gcaactcgaa gctccttccg atcactggac aactccagag aagcaggctt ataatgacgt 481 tggagatctc tggtggtggc ttcaaaacga gcgttgccgt gatcagttcg caatttccca 541 cgataaactt ggagttccaa ctgtcggagt gttcaccaat atgaagggaa atgatccaga 601 gcttgcagga gatgccgata aggctgaaag agctaactgg accgaaaccg tcttcacttg 661 gtcaccacac ggctcctacc tttccacgat ccataagcaa ggaatcatac tttggggagg 721 caaagactac gctcgtgccc accgtttcgc tcataccaac gttcaataca ttgatttctc 781 gccgtgtgag acctaccttg ttacctacgc cgctccggaa gagtcgaaca gctggggaga 841 ctgtgagaag gatagtttga gaatttggga cgtccgaacc ggagaattga agaaggcctt 901 ttccactttc gagctcaccg gaagaactca gctcccaacc tggccattct tcagatggtc 961 attcgatgag aagtacttcg cgtgcctcaa ggctccagaa aaggataagc ttgagcgtga 1021 gcagaagatc aacggaattt cgatcttcga atccgagaag ttcgagctct atgaaggccg 1081 tcccgtgaat atcgagaata tcaagcaatt cgagtggtcg ccaacatcca cagtcctcgc 1141 ctactattca gagtgcactg acgccgttcc agccgagttt ggactcttgc aagttccatc 1201 aatgcagaga cttcgttcgg ctcgcgttca caatgtcgcc gacgctcaga tgttctggca 1261 gaagagcgga aagcgattgg ccttctacac gatgagattc aagaagaagg agtacagaga 1321 gaccggagaa gtcaaatatg tgggaggatg ccaataccac gtggacatct tcgagattga 1381 caagaaggac gtttccctta tgaatctccc actttcggag ccattcatcc atttcgattg 1441 ggatccagaa ggcgataagt tctgtgtgct cgtgggaaac accgctaagg ccactccaca 1501 agtctacaag atcgaggcta acagccacgc accgaagctt gtgagcaagt tggacgctgg 1561 agttcacttc aatgaggttc aattcgcgcc gaaaggagga tggcttgcag ttctcgccaa 1621 ggtgtcagct ggaggaaacg tctatttcat tgatacttct ttgtcggagg ccaagagaac 1681 taatgttata gaacatccac tcttcaataa gggatattgg gatccaactg gaagatactt 1741 tgtgacatgc tcaacgttgg gaggaagagc cggagccgat ttgggttacc gaatcttcac 1801 attccaggga agagaactgt gcagaaagaa tctcgaccgg ctcgcccaat tcaagtggag 1861 accacggccg ccggtgaagt tgagcgaaca gaagcagcgt gagatcaaga agaacttgaa 1921 gaagaccgcc gccaagttca tcaagcagga tgacgacgaa aagtgcagag ccagtcagga 1981 ggttgttgag aagcgacgca agatcatggc tgccttcgat attattcgaa gccggaatcg 2041 cgagcaactc gacgccaccc gtgacgagag aatctctctt cgaaacggcg tggacacaga 2101 agcccaactc gacgaggacg aatttgtgga tgaggagatt accattgcgc tgagcacaag 2161 caaaacacaa gcccctctga cggaggagga gatgagagac taattagtta tttgatttcc 2221 cggtttttcc ccttttttat gcgctgcttt ttcttcctga tttctcgaag acttggagcg 2281 gcgtcccctc tttttggtgg ttccaccatg tactcgtttt cgttttcctc ttcattttcc 2341 cagtcatgtc gtcattttct gaacaacgcc tttttctatg gcaaatttaa ctttatgatg 2401 cctgaatgga gaaggttttt tcaagcttct tttgggcggc cctaatatta tttaattgtt 2461 tctctctatc cactttaata tctcttgttg ctcccgtctc tccgtgtttt ctggtggttt 2521 ttgccgataa aatgttgatg aattagttga tgtttcagat tttttccaaa taaacagaag 2581 tgaaaattca taaat //