Dbfetch

Dbfetch

LOCUS       NM_001027283             450 bp    mRNA    linear   INV 22-NOV-2023
DEFINITION  Caenorhabditis elegans Caspase A subunit p16 (csp-1), partial mRNA.
ACCESSION   NM_001027283
VERSION     NM_001027283.1
DBLINK      BioProject: PRJNA158
KEYWORDS    RefSeq.
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 450)
  AUTHORS   Sulson,J.E. and Waterston,R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282 (5396), 2012-2018 (1998)
   PUBMED   9851916
  REMARK    Erratum:[Science 1999 Jan 1;283(5398):35]
REFERENCE   2  (bases 1 to 450)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 450)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  TITLE     Direct Submission
  JOURNAL   Submitted (29-OCT-2023) WormBase Group, European Bioinformatics
            Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org
REFERENCE   4  (bases 1 to 450)
  AUTHORS   Sulson,J.E. and Waterston,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger
            Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute
            at Washington University, St. Louis, MO 63110, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by WormBase. This
            record is derived from an annotated genomic sequence (NC_003280).
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Caenorhabditis elegans"
                     /mol_type="mRNA"
                     /strain="Bristol N2"
                     /db_xref="taxon:6239"
                     /chromosome="II"
     gene            <1..>450
                     /gene="csp-1"
                     /locus_tag="CELE_Y48E1B.13"
                     /db_xref="GeneID:175007"
                     /db_xref="WormBase:WBGene00000819"
     CDS             1..450
                     /gene="csp-1"
                     /locus_tag="CELE_Y48E1B.13"
                     /standard_name="Y48E1B.13c"
                     /note="Partially confirmed by transcript evidence"
                     /codon_start=1
                     /product="Caspase A subunit p16"
                     /protein_id="NP_001022454.1"
                     /db_xref="EnsemblGenomes-Gn:WBGene00000819"
                     /db_xref="EnsemblGenomes-Tr:Y48E1B.13c"
                     /db_xref="GeneID:175007"
                     /db_xref="GOA:G5EBM1"
                     /db_xref="InterPro:IPR001309"
                     /db_xref="InterPro:IPR002138"
                     /db_xref="InterPro:IPR002398"
                     /db_xref="InterPro:IPR006570"
                     /db_xref="InterPro:IPR015917"
                     /db_xref="InterPro:IPR016129"
                     /db_xref="InterPro:IPR029030"
                     /db_xref="UniProtKB/Swiss-Prot:G5EBM1"
                     /db_xref="WormBase:WBGene00000819"
                     /translation="MPRTDAKKSNHKHKYCYEMNSNPRGTVLILSNENFKNMERRVGT
                     KQDEVNLTKLFQKLQYTVICKRNLEAESMLEAIKEFAEMAHTDSIILFLLSHGDGAGS
                     VFGIDDMPVNVMEVSTYLAYHQNLLLKPKWVAVSACRGGKIEHGCSR"
ORIGIN      
        1 atgccgagaa cggacgccaa gaaatcgaac cataaacaca agtattgtta tgagatgaat
       61 tcaaatccga gagggaccgt cctcatatta agtaacgaga acttcaagaa tatggagaga
      121 agagtcggaa cgaaacaaga cgaagtaaat ctaaccaagt tgttccaaaa gcttcagtac
      181 acagtaattt gcaaacggaa tcttgaagct gaaagcatgc ttgaagctat caaggaattc
      241 gcggagatgg cacataccga ttcgatcata ctcttcctat taagtcatgg tgatggagct
      301 ggaagtgtct ttggaattga tgacatgcct gtcaatgtaa tggaggtatc cacatattta
      361 gcgtatcatc aaaatcttct tctcaagccc aaatgggttg ccgtgtcagc atgtcgcgga
      421 gggaaaattg aacatgggtg ttcccgttga
//