Dbfetch
LOCUS NM_001023817 3061 bp mRNA linear PLN 14-JUL-2022 DEFINITION Schizosaccharomyces pombe putative m-AAA protease Yta12 (yta12), mRNA. ACCESSION NM_001023817 VERSION NM_001023817.2 DBLINK BioProject: PRJNA127 BioSample: SAMEA3138176 KEYWORDS RefSeq. SOURCE Schizosaccharomyces pombe (fission yeast) ORGANISM Schizosaccharomyces pombe Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces. REFERENCE 1 (bases 1 to 3061) AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R., Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D., Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T., Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P., Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D., Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S., Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M., Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S., Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S., Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S., Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M., Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G., Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J., Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I., Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D., Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H., Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H., Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S., Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z., Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C., Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L., Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A., Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L., Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V., Ussery,D., Barrell,B.G. and Nurse,P. TITLE The genome sequence of Schizosaccharomyces pombe JOURNAL Nature 415 (6874), 871-880 (2002) PUBMED 11859360 REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to Cerutti L]] REFERENCE 2 (bases 1 to 3061) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (13-JUL-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 3061) AUTHORS Wood,V. CONSRTM The Schizosaccharomyces pombe Genome Sequencing Consortium TITLE Direct Submission JOURNAL Submitted (29-JUN-2007) European Schizosaccharomyces genome sequencing project, Sanger Institute, The Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_003423). On Dec 10, 2012 this sequence version replaced NM_001023817.1. FEATURES Location/Qualifiers source 1..3061 /organism="Schizosaccharomyces pombe" /mol_type="mRNA" /strain="972h-" /db_xref="taxon:4896" /chromosome="II" gene 1..3061 /gene="yta12" /locus_tag="SPBC543.09" /db_xref="GeneID:2541079" CDS 480..2801 /gene="yta12" /locus_tag="SPBC543.09" /codon_start=1 /product="putative m-AAA protease Yta12" /protein_id="NP_596797.1" /db_xref="EnsemblGenomes-Gn:SPBC543.09" /db_xref="EnsemblGenomes-Tr:SPBC543.09.1" /db_xref="GeneID:2541079" /db_xref="GOA:Q9HGM3" /db_xref="InterPro:IPR000642" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR003959" /db_xref="InterPro:IPR003960" /db_xref="InterPro:IPR005936" /db_xref="InterPro:IPR011546" /db_xref="InterPro:IPR027417" /db_xref="PomBase:SPBC543.09" /db_xref="PomBase:SPBC543.09.1" /translation="MRNPFLTFRAPTRKTGDYLVSKFVKKDNFSSLRLARAYTFSTRS TAVSQFSLLSLSQRSFQSLKINKGIPEKHKIPLISSKQFSVTSKRSQNGSSGSNSDAN GRKNGQKNDDSKKKGLNGNDPKKVFEIALNGNTILGGILVAYILYNVLSPNANMQEIT WQDFRQQFLDKGLVERLVVVNRNMVRVILRGGVASGSGQYYFSIGSIDSFDRKLEDAQ RQLGIPPSEFVPVAYHDEVSVLATLLSFAPTLLIIGSVIYLSRRASGAAGGGQGGIFG IGKSRAKMFNHETDIKIKFADVAGVDEAKEEIMEFVKFLKNPKFYERLGAKIPRGAIL SGPPGTGKTLLAKATAGEANVPFLSVSGSEFLEMFVGVGPSRVRDLFATARKNAPCII FIDEIDAIGKARGRGGQFGSNDERESTLNQLLVEMDGFTSSEHIVVFAGTNRPDVLDP ALLRPGRFDRQITIDRPDIGGREQIFKVHLKHIKAADNIDLIAKRLAVLTSGFTGADI MNVCNEGALIAARSNSNEVQMVHFEQAIERVTAGLEKKSRVLSPEEKNTVAHHEAGHA VAGWFMEYVDPLLKVSIIPRAQALGYASYLPKDQYLMSRGQILDQMGMALAGRVSEEI FFGPEKITSGASDDFQKVTRMAQAYVTQYGMSPTVGTIAYPIDTRETVQKPFSEATAQ MIDEEIRKLVKHAYERTKKLLLEHKQGLENIAQRLLQKEVITYNEVETILGPRPYAYK HLNISELMRQSEYKNDHDPRNPPIPPSPQQPSA" ORIGIN 1 cccacaacac acaagtccaa ggcatctata ttatccttcc tttaggctat tttttgttga 61 caggattagt aacgggttta ttgagctgaa aaaaaagtga caactgtgtt cttattcctt 121 ttaattacca tttttgctga cgtgaaacat tggaatttct tcaatttcat aacgcttttt 181 ggaggttgcc caaatccatg tccggaggta ataataaatt tttattttaa tacaacctta 241 taacttttcg tctctattcg ttttggtctc aattactgaa ttgaacgatt aattactgct 301 ttcttgaatt ttttaattct agaatccacc tttactcgtc atatacgaag gatatttttc 361 ttaaaacaat catttacgtt tatctctttc gatattgagg gttttatata ttatacttgc 421 ccttacacgc tcaattcaag ttattgtacc ctgcgactta tttccatata atattcctta 481 tgcgaaatcc ctttttgacg tttagggcac ctactaggaa aacaggagat tacctggttt 541 ctaaattcgt aaagaaggat aatttttctt ctttgcgttt ggcaagggct tatacttttt 601 ctacacgttc cacagctgtt tcacaatttt ctcttctctc actttctcag agatcttttc 661 agtcccttaa aataaataaa ggaataccgg aaaaacataa aatccctctc atttcatcta 721 aacaatttag cgtaacctca aaaagatcgc aaaatgggtc ttcaggatcc aattctgatg 781 ctaatggtag gaaaaatggc cagaaaaatg atgattcaaa aaagaaggga ttgaatggca 841 atgatccgaa aaaagttttt gaaatagcct taaatggcaa cactatttta ggtggaattt 901 tagttgccta tatcctttac aatgttctct cgcctaatgc aaatatgcaa gaaattactt 961 ggcaagattt tcgacaacag tttttagaca agggtttagt tgaacggcta gttgttgtta 1021 accgcaatat ggttagagtt attttgagag gcggtgtagc ttcaggttca gggcagtact 1081 atttttcaat tggttccatc gactctttcg atcgaaaact agaggatgca caacgtcaac 1141 tgggtattcc accttctgaa tttgtccctg tcgcttatca tgacgaagtc tctgttcttg 1201 ctactttatt gtcttttgct cccaccttac tgatcattgg aagtgtcatt tatttatcgc 1261 gacgggcttc gggtgccgca ggaggtggtc aaggtggcat ttttggaatt ggtaagagcc 1321 gagcgaagat gtttaatcat gaaactgata tcaaaataaa atttgctgat gtcgctggcg 1381 ttgacgaggc taaagaagag attatggaat tcgtcaaatt tttaaaaaat cccaagtttt 1441 atgaaaggtt gggggctaaa attcctcgtg gtgccattct ttctggtcct cctggtaccg 1501 gtaaaactct tcttgctaaa gccaccgctg gtgaagctaa cgtccctttt ttaagtgtgt 1561 caggttctga gtttcttgaa atgtttgttg gtgttggacc ttcccgcgta agagatcttt 1621 ttgctactgc tcgcaagaac gctccttgta ttattttcat agatgaaatt gatgcaattg 1681 gtaaagcaag aggacgtgga ggacaatttg gttccaatga tgaacgcgaa agcactctta 1741 atcagctatt agttgaaatg gacggtttta cgtctagcga acatatcgtc gtattcgctg 1801 gtactaatcg accagacgta ttggacccgg cacttctacg tcctggtcga ttcgatcgtc 1861 aaattacgat tgatcgtcct gatattggcg gtcgtgaaca aatatttaag gtccacctta 1921 agcatattaa ggcagccgat aacatcgact taattgccaa gcgtcttgcc gtcctaactt 1981 ctggttttac aggagctgat ataatgaatg tatgtaatga aggagcgtta attgcagcac 2041 gatcaaatag taatgaagtc caaatggtac attttgagca agctattgaa agagtcacgg 2101 caggtttgga aaagaagagt agggtactaa gtcctgaaga aaaaaacacc gttgctcatc 2161 atgaagctgg acatgcggta gctggttggt ttatggagta cgtcgatcca ctattgaagg 2221 tctcaatcat tcctagagct caagcccttg gctatgctag ttatttaccc aaagatcagt 2281 atctgatgag tcgagggcag attttagatc aaatgggaat ggctttggct gggcgtgttt 2341 ctgaagaaat attttttgga ccagaaaaga ttacttcggg agcttccgat gattttcaaa 2401 aagtaacgcg catggctcaa gcgtatgtga cccaatatgg tatgtctccg actgttggta 2461 ctatagctta tcccatcgac actcgggaaa ctgttcaaaa accattttct gaggctacag 2521 ctcaaatgat tgatgaagaa attcgaaagc ttgtaaagca tgcatacgaa agaactaaga 2581 aacttttgct agaacataag caaggcttag aaaatattgc tcaacgtcta ttacagaaag 2641 aagtcatcac ttataacgaa gttgagacga ttcttggacc aaggccatat gcatacaaac 2701 atttaaatat ttctgaactt atgcgtcagt ctgagtataa aaatgatcac gatcctcgaa 2761 atccaccaat ccccccatct cctcaacaac cttctgccta atttgtcaat ttactgaatt 2821 taaataaagc gttatgaatg aaaatagtta ctttcatgga tctcatgatc aaagtatttg 2881 tcaattgaat atcatatagc tattttatct attttttcta tttaatatta cagaagctag 2941 ataaatatac ttaacatcaa ttcttctgaa ctttaaaagg ttaatagatt attattttct 3001 aacacaaaat agctaatatc gtaacaaaca aacttgtgtt tagtttcgac ctttagacca 3061 g //