Dbfetch
LOCUS NM_001023507 3057 bp mRNA linear PLN 14-JUL-2022 DEFINITION Schizosaccharomyces pombe alanine racemase Alr1 (alr1), mRNA. ACCESSION NM_001023507 VERSION NM_001023507.2 DBLINK BioProject: PRJNA127 BioSample: SAMEA3138176 KEYWORDS RefSeq. SOURCE Schizosaccharomyces pombe (fission yeast) ORGANISM Schizosaccharomyces pombe Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces. REFERENCE 1 (bases 1 to 3057) AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R., Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D., Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T., Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P., Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D., Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S., Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M., Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S., Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S., Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S., Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M., Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G., Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J., Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I., Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D., Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H., Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H., Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S., Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z., Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C., Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L., Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A., Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L., Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V., Ussery,D., Barrell,B.G. and Nurse,P. TITLE The genome sequence of Schizosaccharomyces pombe JOURNAL Nature 415 (6874), 871-880 (2002) PUBMED 11859360 REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to Cerutti L]] REFERENCE 2 (bases 1 to 3057) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (13-JUL-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 3057) AUTHORS Wood,V. CONSRTM The Schizosaccharomyces pombe Genome Sequencing Consortium TITLE Direct Submission JOURNAL Submitted (03-JUL-2007) European Schizosaccharomyces genome sequencing project, Sanger Institute, The Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_003421). On Dec 10, 2012 this sequence version replaced NM_001023507.1. FEATURES Location/Qualifiers source 1..3057 /organism="Schizosaccharomyces pombe" /mol_type="mRNA" /strain="972h-" /db_xref="taxon:4896" /chromosome="III" gene 1..3057 /gene="alr1" /locus_tag="SPCC965.08c" /db_xref="GeneID:2538742" CDS 1754..2881 /gene="alr1" /locus_tag="SPCC965.08c" /EC_number="5.1.1.1" /codon_start=1 /product="alanine racemase Alr1" /protein_id="NP_588518.1" /db_xref="EnsemblGenomes-Gn:SPCC965.08c" /db_xref="EnsemblGenomes-Tr:SPCC965.08c.1" /db_xref="GeneID:2538742" /db_xref="GOA:O59828" /db_xref="InterPro:IPR000821" /db_xref="InterPro:IPR001608" /db_xref="InterPro:IPR009006" /db_xref="InterPro:IPR011079" /db_xref="InterPro:IPR020622" /db_xref="InterPro:IPR029066" /db_xref="PomBase:SPCC965.08c" /db_xref="PomBase:SPCC965.08c.1" /translation="MRGAKSVIDLHAIAHNYNVAKQMMLQKNPSGHVLAIVKANAYGH GAVQVARFLLKHCSSIDGFGVSSIEEALELRHGGIYNKIVLLEGFFTEEDELKLIDDY NFSIIIHSEDQVNSFIKYPFNRPVEIWLKLDSGMNRLGFTPSQFMKFYNLLSNNKNVS NIGKITHFAFADMLENPEHTLKQWDIFEKSVAHLPGPLSAGGSAIILGWLNTVCTDWL RAGIMLYGISPFLSKNKDSKTPESVNIKPAMKLVSTIISVKHVDKGQPIGYGGRYVAT RDMKLGVVAMGYGDGFPRQVKDGCPVLVNGVKAPIVGRVSMDMLTVDLSDIPDVKPGD EVIFWGTPELTVADIAKYCSDTSPYELVTKLTRRVPLQYTY" ORIGIN 1 ttgaaacatc atattaattt gcagtgttat cactaaatag aggttgtgtt tgatttcgaa 61 tacgtataga aacttgaagt gagctgagca cgcaaattat attaccaagg taaacaaata 121 aatgcatttt gtgggtatta ttctttcgat atttattctt ccttaaaaga tcacgtttac 181 ttagttattt cttttctaag caagtaaatg tttaattctc attccatatc tgaatagttg 241 aattattttt aaaacaagaa aagaaaaaaa tatatttttc ctccctcatc gttttacaaa 301 acgtctctgt ttctttataa ttaaaaaaaa aaaaaaaaat attattatac tcttcgaatt 361 tcgatattca aacataaact ctttatttta tcatcaatga cttattgaga tttttaatat 421 ttataaatca acacgattga tctaagtgtg aggatgaatt tctgctggct gcgaaagagt 481 ggacttggag catttatgag aagctgctaa aaatgatgtc gtctaccttg aataaatggt 541 ctcaaattgt tcgcaagcgt ttgtaacacc tagaatggcg cgctgacaag tttgtctggg 601 tacttaatta gaaaagcatg acctaaaatt ttacaacttt tttccacaag tgactaccat 661 atgccttgca attaatttcc tgagcagttt attgtatttc tactttgcca actaggaagc 721 ttaatctatc agatcattgt ttgtttctgc gttgtttgca gattacttac cgcttgttga 781 atttaccagt tgcttcagat atgacctgtt ccaggaattc ttttaatttc aaataaaacc 841 aatcaagaga attaaaaaat cattttcttt tgatccgtat ttaaaagaag tctctgaatt 901 ttatatattg ggatacactg aggtagtgtt tggagccaaa tgttacaatt taagctcttc 961 caagataatg catttctaaa acttcttgtt ttattttcct taatttattt ttaatacatc 1021 acctatcatc gtactaacgc taatttaaat ctcgaagatt tttttgattt atcgaaatta 1081 agtttagtcg taatgggtaa atatcatttt cttcttttgt tttttggttc agcagatttg 1141 gattgaagcc tacatacttt ttgagtgtgt ttttatataa tgatagtaat cgctgagctt 1201 gaacactttc ttaacaattg aagcgactaa caaaacacct atgcactgaa cttgatgacg 1261 atctgaacta ccacgtagtt cttattatta ccaaaaacag tttcatttca aaacgaatgt 1321 tatagaacat catcctgttt tgatgtaatt tttttagcac caccttgaag tgccaacaat 1381 tccgtggcag tttagccgcg aaccggaaat taaaatgcga aacttggaca tccaccttaa 1441 ctgagttaac ttttttgcga aatgaaacat tatctgttct tctcgatagt cggttaaacc 1501 agaaataaat ttaagcgaca atggatgaag tatcgtgatg aagattgcag ctggaaatgc 1561 acggtgagga tagcaaaaat atggaaatgc tgtagtaaat tcgcttaaat aaatcaactg 1621 ggaggcttca attccgatag cgcttcttga atggggatat ttaaagcata gattcaattg 1681 tcaacggttc acgaaataac tcgataacgt cccttgctat acaaatttct atcttgattc 1741 atttaaatta accatgagag gtgcaaagtc cgtcattgat ttgcatgcca ttgcacacaa 1801 ttataatgtt gccaagcaaa tgatgcttca aaaaaatcca agcggtcatg ttttagcaat 1861 tgtaaaagca aacgcttatg gacacggagc tgtacaagtt gcacgtttcc ttctcaaaca 1921 ttgctcttca attgatggct ttggtgtttc ttcaattgaa gaggctttag aattaaggca 1981 cggtggaatc tataacaaaa ttgttctcct ggaaggattc tttactgagg aggatgaatt 2041 aaaacttatt gatgattaca atttttctat tatcattcat tctgaagacc aggtgaatag 2101 ttttattaaa taccctttca acagaccagt agagatttgg ttgaaacttg actctggaat 2161 gaaccgtcta ggttttacac ctagtcagtt tatgaagttc tataatttac taagcaataa 2221 caaaaacgtt agtaatatcg gaaaaatcac tcattttgca tttgcagata tgctagaaaa 2281 tccggaacac actttgaagc aatgggatat atttgaaaag tctgttgcgc atttaccagg 2341 tccacttagt gctggcggat ctgcgattat tttgggctgg ctaaacactg tgtgcacaga 2401 ctggttgcgt gctggtatca tgttatatgg tatttctcca tttctttcta aaaataaaga 2461 ctcaaaaact ccagagtctg ttaatataaa gcctgccatg aaactggtat ctaccataat 2521 aagtgtgaaa catgttgaca agggccagcc cattggttat ggagggagat atgttgctac 2581 tagagatatg aaactaggtg ttgtagcaat gggttacgga gacggatttc cccgtcaagt 2641 taaagatgga tgtccagttt tagtgaatgg cgtgaaggct ccaattgttg gtagggtttc 2701 catggacatg cttactgttg atctttcaga cattcctgat gtcaagccag gggatgaagt 2761 aatattttgg ggaactccag aattgacagt ggcagacatt gctaaatatt gtagtgatac 2821 tagcccttat gagcttgtaa caaaactcac taggagagtt cctttacagt acacatacta 2881 atttttcttg ataaaatgag caaagcttca ttggtatgct acctttttta tagtcttttt 2941 ttgtttacaa tatgcgcttg ttcctgaata atctcatact taatatcaat ggtttaccaa 3001 gttataaaag aaaacagcat aatctaacgc tttcaccgca taagtaagta gcacaag //