Dbfetch
LOCUS NM_001023332 2506 bp mRNA linear PLN 14-JUL-2022
DEFINITION Schizosaccharomyces pombe nucleoporin Nup60 (nup60), mRNA.
ACCESSION NM_001023332
VERSION NM_001023332.2
DBLINK BioProject: PRJNA127
BioSample: SAMEA3138176
KEYWORDS RefSeq.
SOURCE Schizosaccharomyces pombe (fission yeast)
ORGANISM Schizosaccharomyces pombe
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina;
Schizosaccharomycetes; Schizosaccharomycetales;
Schizosaccharomycetaceae; Schizosaccharomyces.
REFERENCE 1 (bases 1 to 2506)
AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R.,
Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D.,
Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T.,
Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P.,
Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D.,
Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S.,
Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M.,
Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S.,
Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S.,
Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S.,
Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M.,
Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G.,
Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J.,
Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I.,
Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C.,
Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D.,
Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H.,
Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H.,
Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S.,
Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z.,
Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C.,
Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L.,
Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A.,
Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L.,
Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V.,
Ussery,D., Barrell,B.G. and Nurse,P.
TITLE The genome sequence of Schizosaccharomyces pombe
JOURNAL Nature 415 (6874), 871-880 (2002)
PUBMED 11859360
REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to
Cerutti L]]
REFERENCE 2 (bases 1 to 2506)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (13-JUL-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 2506)
AUTHORS Wood,V.
CONSRTM The Schizosaccharomyces pombe Genome Sequencing Consortium
TITLE Direct Submission
JOURNAL Submitted (03-JUL-2007) European Schizosaccharomyces genome
sequencing project, Sanger Institute, The Wellcome Trust Genome
Campus, Hinxton, Cambridge CB10 1SA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. This record is derived from an annotated genomic
sequence (NC_003421).
On Dec 10, 2012 this sequence version replaced NM_001023332.1.
FEATURES Location/Qualifiers
source 1..2506
/organism="Schizosaccharomyces pombe"
/mol_type="mRNA"
/strain="972h-"
/db_xref="taxon:4896"
/chromosome="III"
gene 1..2506
/gene="nup60"
/locus_tag="SPCC285.13c"
/db_xref="GeneID:2538801"
CDS 126..2336
/gene="nup60"
/locus_tag="SPCC285.13c"
/codon_start=1
/product="nucleoporin Nup60"
/protein_id="NP_588341.1"
/db_xref="EnsemblGenomes-Gn:SPCC285.13c"
/db_xref="EnsemblGenomes-Tr:SPCC285.13c.1"
/db_xref="GeneID:2538801"
/db_xref="GOA:O74500"
/db_xref="PomBase:SPCC285.13c"
/db_xref="PomBase:SPCC285.13c.1"
/translation="MSSGPIRTLHKGKAARNRTPYDRIAASKDGNHSNGPQTPSKSIF
QRAKEWLTPSSWKKAISIFSSPVVNKHEDSFDSKTDEEYLQNVSTTTEDVSMLINTPV
TEKYEQEHRDTSAQATPSIVEQSPNQMLANFFSKKGKTPLNEIEKEGIISILNKSASP
SSSVISPAASLNRFQTPRAAAISKRESGVSSEPRARTSSLTPGNTPNSAKQWSAFRST
FSPLREQDQLSTISPNSLLPAQRLSYYGPTLSTPYNRRLRHKRHSTTPISLSNSIAPS
LSFQPKKARYESANVSFNDTSFTNVPTSSPLHQSTTANHPEKTPSRAAASLLSILDSK
EKNTPSITAKAGSPQSAPSKASYISPYARPGITTSRRRHDQIRPSSEKSEPEKKEPSA
FETLEKSSNVQTYKPSLMPEFLEKASTHGSFAKQKEGEQTSLSEKTALSEPENKTPVF
SFKAPSATTDKPSPPVSSIFSFNAPSAASTKPSPAVSSTFSFNAPTTTPSATSFSIIN
KEKPARSPNETIDVDLEEEGSGISAEVEVANEGEDLQKNATEVKASTSEKPVFRFEAV
TDEKNSEVSSSNQASSSTMISQPNTGFSFGSFNKPAGQEEKPQQRSLFSASFTTQKPE
LPAAKIEPEVQMTNVAIDQRSFEQAEKSPISVSESTSLVEVEKPSAEGTNEHKQDATM
TLEKTDKQGSLEEEPFPKFSFTVLPKENGENLSTMESTQELPKFSFSVLKEEKN"
ORIGIN
1 attccaaaga actaatcttc acttgacgac cgaaagcgac ctttggcttc aaaataccca
61 acaaacgagc attttgctcc tctaaaatag gaatacaata agttttgttt taattcattc
121 ttaatatgtc ttctggtcct attcgaactt tacataaggg taaagccgcg cgaaatcgca
181 caccttacga tcgtattgca gcttctaaag acggaaatca tagtaatggc cctcaaacac
241 cctcaaaatc gattttccag cgtgccaaag agtggctgac tccttcgtct tggaaaaagg
301 caatctcgat atttagttca cctgtcgtga acaaacacga agactctttt gattccaaga
361 cagatgagga atatcttcaa aatgtctcaa ctacgacgga agacgtatct atgttaataa
421 atacacctgt aaccgagaaa tacgagcaag agcaccgtga cacttctgct caagctactc
481 cttccattgt tgagcaatct cctaatcaaa tgttagccaa ttttttctcc aagaagggaa
541 agacaccact taatgagatt gaaaaggagg gcatcattag tattttgaac aaaagtgcct
601 ctcccagttc ttctgtaatc tctccagctg cttcattaaa tcgtttccaa actccaaggg
661 ctgctgcaat ttcgaagcgt gagtctggcg tttcgagtga accacgcgct cgtacttcat
721 cgttgacacc cggcaatacc cctaattctg ctaaacagtg gtctgctttc cgttctacct
781 tctctcctct tcgtgagcaa gaccagctat cgacaatttc tcctaattct cttctacctg
841 ctcagcgact cagctattat ggacctactt tgtccactcc ttataatcgt cgtttacgcc
901 ataagagaca ttcgactacc cctatctctt taagtaactc cattgcacct tcattgagct
961 ttcaaccaaa gaaggcccgt tacgaatccg caaatgttag ctttaatgat acatcattta
1021 ctaacgttcc tacttcatct ccattgcacc aatctaccac tgcgaatcat ccagagaaaa
1081 cacccagtcg tgctgctgcc agtttgttga gtatactcga tagcaaagaa aaaaacaccc
1141 cttctattac tgccaaggcg ggatctccac aaagcgcacc ttccaaagca tcttatatca
1201 gtccttatgc acgacctgga attaccacct ctcgtcgacg ccatgatcaa attcggccat
1261 cttccgaaaa aagcgagccc gaaaaaaaag agccatcggc ttttgaaaca cttgaaaagt
1321 cgtctaatgt gcaaacatac aaacctagcc ttatgcctga atttttggaa aaggcttcca
1381 ctcatgggtc gtttgcgaag cagaaagaag gggaacaaac ttcactgtca gagaagactg
1441 cgctttccga accagaaaat aaaactcctg ttttttcttt taaggctcct tcagccacta
1501 ctgataaacc ttctccacct gtttcttcaa tatttagctt taatgctcct tcggctgctt
1561 ccaccaagcc ttctccagct gtatcttcaa cgtttagttt caatgcacct actacaactc
1621 cttcggcaac tagtttttcc atcattaata aagaaaaacc ggccagatcg cccaatgaga
1681 ctatagacgt tgatttagaa gaagagggct cagggatttc tgctgaagtg gaagttgcca
1741 atgaaggcga agatttgcaa aaaaatgcaa ccgaagtcaa agcttcaact tctgagaagc
1801 ccgtctttag atttgaagcc gtgaccgatg agaaaaacag tgaggtgtct tcttcaaatc
1861 aagcttcgtc ttcgacaatg atatctcagc ccaatactgg attttcattc gggtcattca
1921 ataaacctgc tggtcaagag gagaaacctc aacaacgctc tctgtttagt gcatctttta
1981 ctacacagaa accggaatta cctgctgcta aaattgaacc agaagttcag atgacgaacg
2041 ttgctattga tcaacggagt tttgagcaag ctgagaaaag ccctatctca gtatcggaat
2101 cgacttcgct agttgaagtc gagaaaccct ctgctgaggg cacgaatgaa cataagcaag
2161 atgccactat gacgctcgaa aaaactgaca aacaaggttc cctagaagag gaaccttttc
2221 ccaagttttc gttcacggtt ttgccaaaag agaatgggga gaatctctct acaatggaaa
2281 gcacccagga attacctaaa ttctcatttt cagttttgaa ggaagaaaag aactaaactt
2341 tttggcatta atatactttt attcaatggc atatatctat ttagactaga taaattatat
2401 agcaatgtga taacaagcta actgggaata aacatggatt aaataattta aacatatgcg
2461 tagagaaaat catcttaata atcgaattta ttcttttaaa cacata
//