Dbfetch
LOCUS NM_001022821 3009 bp mRNA linear PLN 14-JUL-2022 DEFINITION Schizosaccharomyces pombe DNA repair protein Rhp42 (rhp42), mRNA. ACCESSION NM_001022821 VERSION NM_001022821.2 DBLINK BioProject: PRJNA127 BioSample: SAMEA3138176 KEYWORDS RefSeq. SOURCE Schizosaccharomyces pombe (fission yeast) ORGANISM Schizosaccharomyces pombe Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces. REFERENCE 1 (bases 1 to 3009) AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R., Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D., Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T., Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P., Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D., Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S., Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M., Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S., Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S., Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S., Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M., Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G., Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J., Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I., Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D., Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H., Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H., Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S., Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z., Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C., Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L., Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A., Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L., Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V., Ussery,D., Barrell,B.G. and Nurse,P. TITLE The genome sequence of Schizosaccharomyces pombe JOURNAL Nature 415 (6874), 871-880 (2002) PUBMED 11859360 REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to Cerutti L]] REFERENCE 2 (bases 1 to 3009) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (13-JUL-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 3009) AUTHORS Wood,V. CONSRTM The Schizosaccharomyces pombe Genome Sequencing Consortium TITLE Direct Submission JOURNAL Submitted (03-JUL-2007) European Schizosaccharomyces genome sequencing project, Sanger Institute, The Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_003421). On Dec 10, 2012 this sequence version replaced NM_001022821.1. FEATURES Location/Qualifiers source 1..3009 /organism="Schizosaccharomyces pombe" /mol_type="mRNA" /strain="972h-" /db_xref="taxon:4896" /chromosome="III" gene 1..3009 /gene="rhp42" /locus_tag="SPCC4G3.10c" /gene_synonym="rhp4b" /db_xref="GeneID:2539465" CDS 565..2625 /gene="rhp42" /locus_tag="SPCC4G3.10c" /gene_synonym="rhp4b" /codon_start=1 /product="DNA repair protein Rhp42" /protein_id="NP_587828.1" /db_xref="EnsemblGenomes-Gn:SPCC4G3.10c" /db_xref="EnsemblGenomes-Tr:SPCC4G3.10c.1" /db_xref="GeneID:2539465" /db_xref="GOA:P87235" /db_xref="InterPro:IPR004583" /db_xref="InterPro:IPR018026" /db_xref="InterPro:IPR018325" /db_xref="InterPro:IPR018326" /db_xref="InterPro:IPR018327" /db_xref="InterPro:IPR018328" /db_xref="PomBase:SPCC4G3.10c" /db_xref="PomBase:SPCC4G3.10c.1" /translation="MPPKRKASKNSVRGRKRRTRTNNLPLNPEVKEETVVSSTHRQTR SQSKKPSLSSSAEPPSESLDDNISALNSLQRSASSSEKGSDEDNEKLGSSEDDEFDDD FDTWEQVDLSPNKQEDKKDLHIVTQHITPQLTKESKKGSSSAMDKSIRLSIHIMHFTC LLYHGSVRNRWLMNSLLLDGLRDLLVEKQPSVVEAWVCSSQTHEDLLKLLNGLRMWWN KSFKIESHGLRKLGYRTLKQGFDIGFSPEIFHNFHEYQASLLSLKGSRDLAAQGFTAL CRSLNLKARLIFSLQPLTFSTASYDDWSPHILPEETSTSIDDDLRYPIFWTEIYDQSE KKWIAVDAVVLNGVYTNDMTWFEPKGAYAESKHLRMGIVAAYDNDLYAKDVTLRYTDY QSSRLKKIRHVSFADKYFDFYKAIFGQLAKRNKDAEDIYEEKELESKVPIREPKSFAD FKNHPEFVLIRHLRREEALLPNAKPVKTATFGNGKKATSEEVYLRKDVVICKTPENYH KEGRVIKEGEQPRKMVKARAVTISRKREHEFRVAETNEPVLQGLYSSDQTELYVPPPI KDGIIPKNGYGNMDCFVESMIPKGAAHLPYRGIAKIAKKLNIDYADAVTGFEFRKHRA IPVTTGIIVPEESAQMVYEEFLECEKIRIEKQQMKERKIIYGQWKHLLNALRIRKRIE EQYA" ORIGIN 1 ctgctgtgca aaatcagtcg tcgatttaaa attcctattt ttaggaaata taagctcgat 61 cagtgacata aatttaaaca gtttcgtttg acgttttact aattaatgaa ttatttcctt 121 aaaatttaac ggctgaagtt ttttttgact tatgtttatt gtctcttatt aatagtgatg 181 catgtggttt aactttttat ttaataattt attttcatgt tatgtttcag atttaaattt 241 tttaaatctt tatttcacgg ttgaaatcaa aagtagttaa tatagctcat aatattcagc 301 aaacaaacta ctcgccattc ttgcgcagtt gatactgacc tctttttcaa aggacttttt 361 aataatcatc atcacagcca ttgttagaat tttgctttct tgttggagag attgcttgaa 421 ataataattc tttaactaag aatatatcag atgtggctgt gattacaact ttttattcaa 481 tttatcgtta ttgatattat ttgaaccagc ggttaaacaa gcattatcct aaagttgatt 541 caattcacat aaactctttg ctcaatgcca cccaaacgca aagcatccaa gaactctgtt 601 cgcggaagga aacgtaggac acggaccaat aacttacctc ttaatcctga agtgaaagag 661 gaaactgttg tatcttcaac tcaccgtcaa actcgtagcc agtcgaaaaa gccaagtttg 721 tcttcctcag cggaacctcc ttctgagagt ttagatgaca atatatcagc gttaaactca 781 cttcaaagga gcgcatcttc atccgaaaaa ggttccgatg aagacaatga gaagttaggc 841 agctcagaag atgacgagtt tgacgacgat tttgacactt gggaacaagt tgatctttct 901 cctaataaac aagaagataa aaaagattta cacatagtca cacagcatat cactcctcaa 961 cttacaaaag aatcgaagaa aggctcttct agtgcaatgg ataaaagcat tcgattatct 1021 attcacatta tgcactttac ttgcttgttg taccatgggt cagtaaggaa tcgctggtta 1081 atgaattcct tacttcttga tgggctgcgc gatttgcttg tcgaaaagca accgtccgta 1141 gtggaggcgt gggtttgtag tagccagacg cacgaggatt tgttaaaatt gttaaatggg 1201 cttcggatgt ggtggaataa atcttttaaa attgagagtc atgggcttcg gaagttgggg 1261 tatcgtactt tgaaacaagg atttgatatc ggcttttcgc cagaaatatt tcataacttt 1321 catgaatacc aagcatcctt actttcgcta aaaggaagcc gggatttggc ggcacaggga 1381 tttactgctc tctgtcgatc tctgaatctg aaagcaagac ttatattttc tcttcaacct 1441 ttgacatttt ctactgcttc ctatgatgat tggtctccac atatcctccc tgaagaaact 1501 agtacatcta tagatgacga cctccgctat cctatttttt ggacggaaat ctatgatcaa 1561 agtgagaaga aatggattgc ggtagatgcg gttgtcttga atggggtata taccaacgat 1621 atgacttggt ttgaacccaa aggagcgtat gcagagtcaa aacatctacg aatgggtatt 1681 gttgctgcat atgataacga tttatacgca aaagatgtaa ctttgaggta tacagattac 1741 caatcaagta ggcttaagaa aattcgacac gtttcttttg cagataagta ttttgatttt 1801 tataaggcta tttttgggca actagcaaag cgcaataaag atgcagagga tatatatgaa 1861 gagaaagaac tggaaagtaa agtgcccatt cgcgaaccta aaagctttgc agattttaag 1921 aatcatcctg aatttgtatt gattagacat cttagaagag aagaagcatt gcttcctaac 1981 gccaagcctg tgaagacagc aacctttggt aacggtaaga aagctacctc tgaggaagtg 2041 tatctccgaa aagatgtggt catatgcaaa acgcctgaaa attatcacaa agaaggacga 2101 gtaattaagg aaggagaaca acctcgaaaa atggtgaagg cgagagccgt cacaattagc 2161 aggaagcgtg aacacgaatt tcgggttgct gaaacaaatg aaccagtgct tcagggtcta 2221 tattcttccg atcaaactga gctatatgtt ccgcctccaa tcaaagatgg tattattcct 2281 aagaacggtt atggtaatat ggattgtttt gttgagagca tgatccccaa gggcgcagca 2341 catttgccat atcgaggaat tgctaaaatt gccaagaaac tcaacattga ttatgcggat 2401 gcagttacag ggtttgaatt tcgtaaacat cgtgcgattc cagttactac aggtataatt 2461 gtacctgaag agtcggctca aatggtttac gaagaatttc ttgagtgtga aaaaatcaga 2521 atagagaagc agcagatgaa agagagaaaa attatttatg ggcagtggaa acacttgcta 2581 aatgcacttc gtattcgaaa gcgtattgaa gaacaatatg cttaattcct ggctttcgtc 2641 ggacacttta gggtttgtat aaccggatgt gtgttttttg aacaatgagg atacttaatt 2701 ccaaacgtta gactcattta tttatttatt gttttgcaaa attgacattt ggttatttgt 2761 gaagtatttt atttatttaa aggaaaaaga ggaagcaaac taccaaatta tctaatattt 2821 tattgattta aaaaacccca gatttttata gcactatttt tcatattggt ggatcacact 2881 ctatttttcg ctttatagat cacccaattg cattaccttg ccaatcgtac tacaaatttt 2941 ttgtttgaag gaacaacgac ttaataaaat aaaataaaaa taaaaataaa aattttcatt 3001 acacggtaa //