Dbfetch
LOCUS NM_001022798 2328 bp mRNA linear PLN 14-JUL-2022
DEFINITION Schizosaccharomyces pombe ubiquitin hydrolase Ubp16 (ubp16), mRNA.
ACCESSION NM_001022798
VERSION NM_001022798.2
DBLINK BioProject: PRJNA127
BioSample: SAMEA3138176
KEYWORDS RefSeq.
SOURCE Schizosaccharomyces pombe (fission yeast)
ORGANISM Schizosaccharomyces pombe
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina;
Schizosaccharomycetes; Schizosaccharomycetales;
Schizosaccharomycetaceae; Schizosaccharomyces.
REFERENCE 1 (bases 1 to 2328)
AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R.,
Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D.,
Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T.,
Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P.,
Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D.,
Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S.,
Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M.,
Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S.,
Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S.,
Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S.,
Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M.,
Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G.,
Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J.,
Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I.,
Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C.,
Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D.,
Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H.,
Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H.,
Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S.,
Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z.,
Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C.,
Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L.,
Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A.,
Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L.,
Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V.,
Ussery,D., Barrell,B.G. and Nurse,P.
TITLE The genome sequence of Schizosaccharomyces pombe
JOURNAL Nature 415 (6874), 871-880 (2002)
PUBMED 11859360
REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to
Cerutti L]]
REFERENCE 2 (bases 1 to 2328)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (13-JUL-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 2328)
AUTHORS Wood,V.
CONSRTM The Schizosaccharomyces pombe Genome Sequencing Consortium
TITLE Direct Submission
JOURNAL Submitted (03-JUL-2007) European Schizosaccharomyces genome
sequencing project, Sanger Institute, The Wellcome Trust Genome
Campus, Hinxton, Cambridge CB10 1SA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. This record is derived from an annotated genomic
sequence (NC_003421).
On Dec 10, 2012 this sequence version replaced NM_001022798.1.
FEATURES Location/Qualifiers
source 1..2328
/organism="Schizosaccharomyces pombe"
/mol_type="mRNA"
/strain="972h-"
/db_xref="taxon:4896"
/chromosome="III"
gene 1..2328
/gene="ubp16"
/locus_tag="SPCC1682.12c"
/db_xref="GeneID:2538947"
CDS 886..2259
/gene="ubp16"
/locus_tag="SPCC1682.12c"
/codon_start=1
/product="ubiquitin hydrolase Ubp16"
/protein_id="NP_587805.1"
/db_xref="EnsemblGenomes-Gn:SPCC1682.12c"
/db_xref="EnsemblGenomes-Tr:SPCC1682.12c.1"
/db_xref="GeneID:2538947"
/db_xref="GOA:O74442"
/db_xref="InterPro:IPR001394"
/db_xref="InterPro:IPR018200"
/db_xref="InterPro:IPR028889"
/db_xref="PomBase:SPCC1682.12c"
/db_xref="PomBase:SPCC1682.12c.1"
/translation="MSLATLQGQSLDFAVKHSLDDLLKNPVRFRPAVVSSPSVPEGTY
TVLNNPKQSTVSRKSFSAPTSPTRNKRSGSSSQEYKKSSGTRGDGANDFVDEDPAFIP
PARILFPEEKLSMEWDNIMPNAPGLVNLGNTCFMNSVLQLMTQTPPLVQYLLSGQHSL
SCRMNACVLCRMEQHVARAYPNKGTKRASAFKPSGIQSMLKVISSHFRPYRQEDAHEF
MRYLVDAWQKSCLQNHKNLDHPSRETSVVHRIFGGYLRQQILCSVCKKPSNTYQALLD
LSVDAKGSSLADSLKHFVHAEKLTKQNKYRCENCKQLVDASKQMTIYRAPNILTIHFK
RFTFNGFQSSKISKQISYPESFNLGPYMSDPNCSCWYELIGVLVHAGGSTRSGHYYSF
CKSSNGVWLKFDDDFVSNSSIDRVLNQQAYILQYKRKSTSSSKHKLNTENTVTKTSNK
KRRKISF"
ORIGIN
1 tttcacagta ccggcgagac aattggggaa ggacttgagg aagatattac ttttggatcc
61 ataaagttgt tttcgtacat tagatatcca tatccttttc cgactttttt gtctttcgtg
121 ggtaacgacg tttgtttacg ttacagtagt attaccagtt ttctggcgag ttcttttccc
181 ttagttgtta agaagttgat tgtttttatt gctttccgcg tttaaaaata taaaacgcga
241 aagcacgtgt cgttgtctct ttatcctctt ttttgttcta tggagtgtta aatcgtagag
301 ctggataact tccatttttt atttatacat tactttcaaa aatattcgaa acacacaaaa
361 gttgcctggt ttattattat atagtttttt tgttacgttc tatcaaattt ttgaaaacac
421 gtcaaatcct cgtttctaat tacccgccga attttttgca tcactttata tccttttcat
481 ttaaaagtaa ttttaatcac tttatctacg gtttcgtctg ctttaccacc tttgcattat
541 ttttttctaa attcatttac tacacctata gtggctggtc atttcaaaat aatttgtgag
601 tttaaatttt ctcattgaac gctttttttt tgctttattt tatttttggt gtttttattt
661 tcgacaactc acgaataagt ttgtttacat tcgtttttgt tgattgttta catcaaactg
721 cttactccgt tcacaatagc tcttgaagat aattgtgaaa agcatcactc ttcttttcta
781 cgtttcttgc tttaaaagat agcttttttt tttcttcttt tctaacattt ttcttcataa
841 tttcaaattt ttgattgctt gttgtttttc cattccgttg ttgacatgtc gcttgctact
901 ttacaaggac agtcactaga ttttgcagtc aagcattcac tagatgattt gcttaaaaat
961 cccgttcgct ttcgtcccgc ggttgtttcc tcaccatcgg ttcctgaagg tacttacact
1021 gtcttaaaca atccaaagca atctactgtt agccgtaagt cattttcagc gcctacttcc
1081 ccaactagaa acaaacgttc tggttcttct tcccaggaat acaaaaaatc ttcaggaaca
1141 aggggtgatg gagctaatga ttttgtggat gaggatcctg cttttatacc tccggctcgc
1201 attctatttc ccgaagaaaa attgtcgatg gaatgggata atatcatgcc caatgctccg
1261 gggctcgtaa atctcggtaa tacttgtttc atgaattcag tacttcagtt gatgactcaa
1321 actccaccgt tggttcaata tcttttatcc ggtcaacatt ctttatcctg ccgtatgaat
1381 gcatgtgtac tctgtagaat ggagcaacat gtcgcccgtg cctatcccaa caaaggcacc
1441 aaacgagctt cggccttcaa accttcaggt atacaaagta tgctcaaagt aatttccagt
1501 catttccgcc catatcgcca agaagatgct catgaattta tgcgatattt ggttgatgct
1561 tggcaaaagt cttgtcttca aaaccataaa aatcttgatc atccaagcag ggagacttcg
1621 gtagtacaca gaatttttgg tggttaccta cgccagcaga ttctatgctc agtttgtaaa
1681 aaaccttcca acacctacca agctttactt gacttatctg tggatgcgaa gggctcctcc
1741 ttggcagatt ccttaaagca ttttgtgcat gcagaaaaac ttaccaaaca aaacaaatat
1801 cgatgtgaaa attgtaagca actggtggat gcgtccaagc aaatgactat ttatcgggca
1861 ccaaatattt taaccattca cttcaagcgg ttcacattca acggtttcca atctagcaaa
1921 atcagtaagc aaatttcata ccctgaatca ttcaatctcg gtccgtatat gtcagatccc
1981 aattgttctt gttggtacga attaattggg gttcttgtac atgcaggcgg aagtacccga
2041 agcggccatt attattcgtt ttgcaaaagt agtaatggtg tttggcttaa atttgacgat
2101 gatttcgttt ccaattccag tattgatcga gttttgaatc aacaggccta tattttgcaa
2161 tacaagagga aatcaacttc atcgtctaaa cacaagctaa acaccgaaaa cacggttacc
2221 aaaacttcta ataaaaaacg gagaaaaatt tcattttaat gcgatacagt tagcttgagc
2281 agttaaagtt tttgcttcct tttgcctatc ttttttttta atatgcta
//