Dbfetch

LOCUS       NM_001022798            2328 bp    mRNA    linear   PLN 14-JUL-2022
DEFINITION  Schizosaccharomyces pombe ubiquitin hydrolase Ubp16 (ubp16), mRNA.
ACCESSION   NM_001022798
VERSION     NM_001022798.2
DBLINK      BioProject: PRJNA127
            BioSample: SAMEA3138176
KEYWORDS    RefSeq.
SOURCE      Schizosaccharomyces pombe (fission yeast)
  ORGANISM  Schizosaccharomyces pombe
            Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina;
            Schizosaccharomycetes; Schizosaccharomycetales;
            Schizosaccharomycetaceae; Schizosaccharomyces.
REFERENCE   1  (bases 1 to 2328)
  AUTHORS   Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R.,
            Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D.,
            Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T.,
            Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P.,
            Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D.,
            Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S.,
            Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M.,
            Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S.,
            Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S.,
            Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S.,
            Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M.,
            Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G.,
            Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J.,
            Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I.,
            Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C.,
            Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D.,
            Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H.,
            Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H.,
            Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S.,
            Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z.,
            Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C.,
            Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L.,
            Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A.,
            Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L.,
            Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V.,
            Ussery,D., Barrell,B.G. and Nurse,P.
  TITLE     The genome sequence of Schizosaccharomyces pombe
  JOURNAL   Nature 415 (6874), 871-880 (2002)
   PUBMED   11859360
  REMARK    Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to
            Cerutti L]]
REFERENCE   2  (bases 1 to 2328)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-JUL-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 2328)
  AUTHORS   Wood,V.
  CONSRTM   The Schizosaccharomyces pombe Genome Sequencing Consortium
  TITLE     Direct Submission
  JOURNAL   Submitted (03-JUL-2007) European Schizosaccharomyces genome
            sequencing project, Sanger Institute, The Wellcome Trust Genome
            Campus, Hinxton, Cambridge CB10 1SA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NC_003421).
            
            On Dec 10, 2012 this sequence version replaced NM_001022798.1.
FEATURES             Location/Qualifiers
     source          1..2328
                     /organism="Schizosaccharomyces pombe"
                     /mol_type="mRNA"
                     /strain="972h-"
                     /db_xref="taxon:4896"
                     /chromosome="III"
     gene            1..2328
                     /gene="ubp16"
                     /locus_tag="SPCC1682.12c"
                     /db_xref="GeneID:2538947"
     CDS             886..2259
                     /gene="ubp16"
                     /locus_tag="SPCC1682.12c"
                     /codon_start=1
                     /product="ubiquitin hydrolase Ubp16"
                     /protein_id="NP_587805.1"
                     /db_xref="EnsemblGenomes-Gn:SPCC1682.12c"
                     /db_xref="EnsemblGenomes-Tr:SPCC1682.12c.1"
                     /db_xref="GeneID:2538947"
                     /db_xref="GOA:O74442"
                     /db_xref="InterPro:IPR001394"
                     /db_xref="InterPro:IPR018200"
                     /db_xref="InterPro:IPR028889"
                     /db_xref="PomBase:SPCC1682.12c"
                     /db_xref="PomBase:SPCC1682.12c.1"
                     /translation="MSLATLQGQSLDFAVKHSLDDLLKNPVRFRPAVVSSPSVPEGTY
                     TVLNNPKQSTVSRKSFSAPTSPTRNKRSGSSSQEYKKSSGTRGDGANDFVDEDPAFIP
                     PARILFPEEKLSMEWDNIMPNAPGLVNLGNTCFMNSVLQLMTQTPPLVQYLLSGQHSL
                     SCRMNACVLCRMEQHVARAYPNKGTKRASAFKPSGIQSMLKVISSHFRPYRQEDAHEF
                     MRYLVDAWQKSCLQNHKNLDHPSRETSVVHRIFGGYLRQQILCSVCKKPSNTYQALLD
                     LSVDAKGSSLADSLKHFVHAEKLTKQNKYRCENCKQLVDASKQMTIYRAPNILTIHFK
                     RFTFNGFQSSKISKQISYPESFNLGPYMSDPNCSCWYELIGVLVHAGGSTRSGHYYSF
                     CKSSNGVWLKFDDDFVSNSSIDRVLNQQAYILQYKRKSTSSSKHKLNTENTVTKTSNK
                     KRRKISF"
ORIGIN      
        1 tttcacagta ccggcgagac aattggggaa ggacttgagg aagatattac ttttggatcc
       61 ataaagttgt tttcgtacat tagatatcca tatccttttc cgactttttt gtctttcgtg
      121 ggtaacgacg tttgtttacg ttacagtagt attaccagtt ttctggcgag ttcttttccc
      181 ttagttgtta agaagttgat tgtttttatt gctttccgcg tttaaaaata taaaacgcga
      241 aagcacgtgt cgttgtctct ttatcctctt ttttgttcta tggagtgtta aatcgtagag
      301 ctggataact tccatttttt atttatacat tactttcaaa aatattcgaa acacacaaaa
      361 gttgcctggt ttattattat atagtttttt tgttacgttc tatcaaattt ttgaaaacac
      421 gtcaaatcct cgtttctaat tacccgccga attttttgca tcactttata tccttttcat
      481 ttaaaagtaa ttttaatcac tttatctacg gtttcgtctg ctttaccacc tttgcattat
      541 ttttttctaa attcatttac tacacctata gtggctggtc atttcaaaat aatttgtgag
      601 tttaaatttt ctcattgaac gctttttttt tgctttattt tatttttggt gtttttattt
      661 tcgacaactc acgaataagt ttgtttacat tcgtttttgt tgattgttta catcaaactg
      721 cttactccgt tcacaatagc tcttgaagat aattgtgaaa agcatcactc ttcttttcta
      781 cgtttcttgc tttaaaagat agcttttttt tttcttcttt tctaacattt ttcttcataa
      841 tttcaaattt ttgattgctt gttgtttttc cattccgttg ttgacatgtc gcttgctact
      901 ttacaaggac agtcactaga ttttgcagtc aagcattcac tagatgattt gcttaaaaat
      961 cccgttcgct ttcgtcccgc ggttgtttcc tcaccatcgg ttcctgaagg tacttacact
     1021 gtcttaaaca atccaaagca atctactgtt agccgtaagt cattttcagc gcctacttcc
     1081 ccaactagaa acaaacgttc tggttcttct tcccaggaat acaaaaaatc ttcaggaaca
     1141 aggggtgatg gagctaatga ttttgtggat gaggatcctg cttttatacc tccggctcgc
     1201 attctatttc ccgaagaaaa attgtcgatg gaatgggata atatcatgcc caatgctccg
     1261 gggctcgtaa atctcggtaa tacttgtttc atgaattcag tacttcagtt gatgactcaa
     1321 actccaccgt tggttcaata tcttttatcc ggtcaacatt ctttatcctg ccgtatgaat
     1381 gcatgtgtac tctgtagaat ggagcaacat gtcgcccgtg cctatcccaa caaaggcacc
     1441 aaacgagctt cggccttcaa accttcaggt atacaaagta tgctcaaagt aatttccagt
     1501 catttccgcc catatcgcca agaagatgct catgaattta tgcgatattt ggttgatgct
     1561 tggcaaaagt cttgtcttca aaaccataaa aatcttgatc atccaagcag ggagacttcg
     1621 gtagtacaca gaatttttgg tggttaccta cgccagcaga ttctatgctc agtttgtaaa
     1681 aaaccttcca acacctacca agctttactt gacttatctg tggatgcgaa gggctcctcc
     1741 ttggcagatt ccttaaagca ttttgtgcat gcagaaaaac ttaccaaaca aaacaaatat
     1801 cgatgtgaaa attgtaagca actggtggat gcgtccaagc aaatgactat ttatcgggca
     1861 ccaaatattt taaccattca cttcaagcgg ttcacattca acggtttcca atctagcaaa
     1921 atcagtaagc aaatttcata ccctgaatca ttcaatctcg gtccgtatat gtcagatccc
     1981 aattgttctt gttggtacga attaattggg gttcttgtac atgcaggcgg aagtacccga
     2041 agcggccatt attattcgtt ttgcaaaagt agtaatggtg tttggcttaa atttgacgat
     2101 gatttcgttt ccaattccag tattgatcga gttttgaatc aacaggccta tattttgcaa
     2161 tacaagagga aatcaacttc atcgtctaaa cacaagctaa acaccgaaaa cacggttacc
     2221 aaaacttcta ataaaaaacg gagaaaaatt tcattttaat gcgatacagt tagcttgagc
     2281 agttaaagtt tttgcttcct tttgcctatc ttttttttta atatgcta
//