Dbfetch
LOCUS NM_001022620 1354 bp mRNA linear PLN 14-JUL-2022
DEFINITION Schizosaccharomyces pombe putative TIM22 inner membrane protein
import complex subunit Tim54 (tim54), mRNA.
ACCESSION NM_001022620
VERSION NM_001022620.2
DBLINK BioProject: PRJNA127
BioSample: SAMEA3138176
KEYWORDS RefSeq.
SOURCE Schizosaccharomyces pombe (fission yeast)
ORGANISM Schizosaccharomyces pombe
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina;
Schizosaccharomycetes; Schizosaccharomycetales;
Schizosaccharomycetaceae; Schizosaccharomyces.
REFERENCE 1 (bases 1 to 1354)
AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R.,
Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D.,
Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T.,
Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P.,
Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D.,
Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S.,
Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M.,
Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S.,
Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S.,
Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S.,
Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M.,
Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G.,
Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J.,
Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I.,
Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C.,
Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D.,
Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H.,
Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H.,
Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S.,
Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z.,
Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C.,
Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L.,
Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A.,
Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L.,
Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V.,
Ussery,D., Barrell,B.G. and Nurse,P.
TITLE The genome sequence of Schizosaccharomyces pombe
JOURNAL Nature 415 (6874), 871-880 (2002)
PUBMED 11859360
REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to
Cerutti L]]
REFERENCE 2 (bases 1 to 1354)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (13-JUL-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1354)
AUTHORS Wood,V.
CONSRTM The Schizosaccharomyces pombe Genome Sequencing Consortium
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2007) European Schizosaccharomyces genome
sequencing project, Sanger Institute, The Wellcome Trust Genome
Campus, Hinxton, Cambridge CB10 1SA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. This record is derived from an annotated genomic
sequence (NC_003423).
On Dec 10, 2012 this sequence version replaced NM_001022620.1.
FEATURES Location/Qualifiers
source 1..1354
/organism="Schizosaccharomyces pombe"
/mol_type="mRNA"
/strain="972h-"
/db_xref="taxon:4896"
/chromosome="II"
gene 1..1354
/gene="tim54"
/locus_tag="SPBC1347.04"
/db_xref="GeneID:2540096"
CDS 217..1260
/gene="tim54"
/locus_tag="SPBC1347.04"
/codon_start=1
/product="putative TIM22 inner membrane protein import
complex subunit Tim54"
/protein_id="NP_596696.1"
/db_xref="EnsemblGenomes-Gn:SPBC1347.04"
/db_xref="EnsemblGenomes-Tr:SPBC1347.04.1"
/db_xref="GeneID:2540096"
/db_xref="GOA:O94624"
/db_xref="InterPro:IPR021056"
/db_xref="PomBase:SPBC1347.04"
/db_xref="PomBase:SPBC1347.04.1"
/translation="MLKTIKSYMPGRNMSIFLGFVAGISGAIYYDRRQKNLIIEKYCS
QVRHLADQPMAPLELPRKLKVYLHGPPGDGIYVAREEFEEYIRPIFNAAAIEFETVES
KGEGNLLEQVARTVYNKRHNISEVSEPEKNLLSVLKPSVDPPAIVLLGRHALKEFLYG
VRYGFSDDIMKRKLETEKLEANNKEEKEEKEGKDDKDDKEDSNDTKNDKKISKNEVDS
SLIEASPLTGQVPPKFLDTIAIFPLPNLLGFSNTPKRLSRFFKRRELADELGAIAVNV
ALSRDVTKFPKQDGTLLLAEEETDWPKQFFTRSDLENRIWTAPFLQDSDEIRFFENID
IFDSTKAKQDKYE"
ORIGIN
1 gaagttggtg gaaaacttct ttcaaaaatc aaatattcac tattacaacc ttcttaattt
61 tcattttgac ttttagaagt tttccttttt gaaaatccat atattgattc gcaaataaac
121 gtgtgtattt catttgtgtg agttcgcata tttcatgttg tgaactttaa aaagagggag
181 aaaccgatag atacgttttt tggtttgttt ttcacaatgt taaaaacaat aaagtcttat
241 atgcctggtc gaaatatgtc catatttttg ggattcgtgg caggcatatc tggagcaatt
301 tattatgatc ggcgtcagaa aaatttaata attgaaaagt attgctctca agtacgccat
361 ttggctgatc aaccgatggc acctcttgag ttaccgagaa aattgaaggt atatcttcat
421 ggacctccag gggatggaat atacgttgca cgggaagaat ttgaagaata cattagacct
481 atatttaatg ctgcagccat tgaatttgaa accgtggagt ccaaaggtga agggaattta
541 ttggaacaag tagcgaggac ggtttacaac aagaggcata acatttctga agtttctgaa
601 ccggaaaaaa acctcttatc agttttaaaa ccaagtgttg atcctcctgc tattgtttta
661 ttaggaaggc atgccctcaa agagttcctg tacggcgttc gatatggatt ttccgacgat
721 attatgaaaa gaaaacttga aacagaaaaa ttggaagcca ataataaaga ggagaaagaa
781 gagaaagaag gaaaagatga caaagatgac aaagaggata gtaatgatac aaagaacgat
841 aaaaaaatta gcaaaaacga agtagactct tctctgatag aagcaagtcc gttgactggt
901 caagttccac caaaattttt ggatactatt gctatttttc ccttaccaaa tcttttaggg
961 ttttctaaca ctcctaagcg actttcaaga ttttttaaaa gaagagagct agctgatgaa
1021 ttaggcgcaa ttgccgtaaa cgttgcatta agcagggatg taactaagtt tccaaaacaa
1081 gacggcactt tacttctagc tgaagaggaa acagattggc cgaagcaatt ttttacaaga
1141 tctgatttgg aaaaccgcat ttggacagct ccctttctac aggactctga tgagatacgt
1201 ttttttgaaa acattgatat ctttgattca acgaaagcca aacaagataa gtatgaatga
1261 agtgatgtct attctaaaat ttgaagaata aaacaaatat atgaaattaa gtactgtgta
1321 tgaagaatta ctaggtagcc ataaacagta aaag
//