Dbfetch
LOCUS NM_001021966 6061 bp mRNA linear PLN 14-JUL-2022 DEFINITION Schizosaccharomyces pombe putative tRNA-splicing endonuclease positive effector (SPBC29A10.10c), mRNA. ACCESSION NM_001021966 VERSION NM_001021966.2 DBLINK BioProject: PRJNA127 BioSample: SAMEA3138176 KEYWORDS RefSeq. SOURCE Schizosaccharomyces pombe (fission yeast) ORGANISM Schizosaccharomyces pombe Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces. REFERENCE 1 (bases 1 to 6061) AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R., Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D., Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T., Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P., Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D., Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S., Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M., Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S., Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S., Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S., Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M., Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G., Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J., Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I., Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D., Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H., Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H., Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S., Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z., Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C., Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L., Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A., Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L., Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V., Ussery,D., Barrell,B.G. and Nurse,P. TITLE The genome sequence of Schizosaccharomyces pombe JOURNAL Nature 415 (6874), 871-880 (2002) PUBMED 11859360 REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to Cerutti L]] REFERENCE 2 (bases 1 to 6061) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (13-JUL-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 6061) AUTHORS Wood,V. CONSRTM The Schizosaccharomyces pombe Genome Sequencing Consortium TITLE Direct Submission JOURNAL Submitted (29-JUN-2007) European Schizosaccharomyces genome sequencing project, Sanger Institute, The Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_003423). On Dec 10, 2012 this sequence version replaced NM_001021966.1. FEATURES Location/Qualifiers source 1..6061 /organism="Schizosaccharomyces pombe" /mol_type="mRNA" /strain="972h-" /db_xref="taxon:4896" /chromosome="II" gene 1..6061 /locus_tag="SPBC29A10.10c" /db_xref="GeneID:2540523" CDS 84..5918 /locus_tag="SPBC29A10.10c" /codon_start=1 /product="putative tRNA-splicing endonuclease positive effector" /protein_id="NP_596055.1" /db_xref="EnsemblGenomes-Gn:SPBC29A10.10c" /db_xref="EnsemblGenomes-Tr:SPBC29A10.10c.1" /db_xref="GeneID:2540523" /db_xref="GOA:O94387" /db_xref="InterPro:IPR016024" /db_xref="InterPro:IPR024481" /db_xref="InterPro:IPR026852" /db_xref="InterPro:IPR027417" /db_xref="PomBase:SPBC29A10.10c" /db_xref="PomBase:SPBC29A10.10c.1" /translation="MENDEAFDRLIRKIQENQKHPSFEGSNKVLHLALSYLNTNRQNP HWVCDPKLQVAVRECLFLFSFQNDNEYLVWFKKHLNERLQLCPKCIVKYHQSLDDFKS LCLNIFHFDPNTLEIVMEKIYSWDIFRLQEVLKTVPKIDTSSASKPILCAFYEILYSP RILHNKEIFPLFRNRFLESGFLRLSKNLVPGVISLLFSRDDELRRWACSILSDVKTIS DNEFKILEGPLLQEIRSLDQKKENENEMQIFLKGLSLLLKHVDHLYFRGLTGKNFNVA DFILSGLQSDHTNLCPSFLVCLHSLLYCYGRNFWTPEISPSEVIDKIFNGNAYKRWTE ENTSNFSNDQKAENPFEWATSLLKTISIIDEVELINKILINYTMQYKKELEVGFKNVQ LLQSLADIFSVLFSEYFMIFPHSDQSLQNKVFELHSTLAIKFDELFRLLNLENEESVE WRLIKKVFEYRLNLDLYILKQFYCHYLDRNRKPPLNIKSVSESFKNFWVYLQNVFREE KFFMVRIVFRACSTVCLIDKLPPKKVDIPFKSDFENALNGFVATFSEMLIQTQCWHLS AQTQLVSNPLTFRGIFSLVFSPILEISTGSISIIKSISLSDSVVDTIGELLRSQFSNT LNSSCYVLLQWLKVRNFGGAKHIVYFNKLIINTIFDSVDGLTSKDATFAKQVEKKESL KNFWESLWKFFTHFFIVLPTWPVHDKDNLVDLMRDTLDFCDMLINIFEEVNGFIFGLS DNDIKIVSANDKGSALAMCIADSLVTVSYWLKLTDSSLLTSVVKVICKMLKICKKLEC PISQNVIDIIHRASITSDEQTILTFTEREDLFISLTPYLSEDVLNHSPFNDTNTLETK LQSDDRGLLSKDQTIGIAKKLPESNISTSNHFLLPPKAISASKAINRNAQKSQNLNFL KSKQETTQRIRESAKVPRTSAGNHLSEKLNSDNHIPKALQKLDSADPIRKPSLLHTSK SYSNPDDKNTSTSDEDTSESEEESSNGLFSLAREANSHASKSLPQRRQIQFLDFDSLK TKNVVHPTQLRRNTQQSAQLARLRLNPDVQEFYKVILGWNPLADSFSASNVEMQCVQA KFTYNDSNAYEKVFKPMLFHECWAQVKSAVEEKQYPPIDLILNTRSTVDNFVDIYFTS CSPTEVSFLSDTDICLLSKSQSSGDTNNPKSFQLCKIQSISRKKESLELCLRMNIESI DLQEYAPNIRFTAQKLFNATTSLREFAALKSLRHLPLSQRILDANVTRLPSNFTDDKK QKIMKSYGVNEPQAYAIYASSVNDGFTLIQGPPGTGKTKTILGMIGAVLTSSSQGLQF NVPGQTRKTSKNKILICAPSNAAIDEILLRIKAGVYDHEGIKFFPKVIRVGFGDSISV HAKEFTLEEQMIKQMELTNLKKDQEANNSSDTRKKYDSIIKKRDSLREDLEKFRSTGK NSSILEAQLREITKQKNMLEQSLDDMRERQRSTNRNLDVLKKQIQNQLLQEADIVCAT LSASGHELLLNAGLTFRTVIIDEAAQAVELSSIIPLKYGCESCVMVGDPNQLPPTVLS KTSAKFGYSQSLYVRMFKQHNESACLLSIQYRMNPEISRFPSKFFYNSKLLDGPNMSA VTSRPWHEDPQLGIYRFFNVHGTEAFSNSKSLYNVEEASFILLLYERLIQCYLNIDFE GKIGVVTPYRSQVQQLRSQFQRKYGSIIFKHLDIHTVDGFQGQEKDIIIFSCVRSSMS GGIGFLQDLRRLNVALTRAKSSLYIVGNSKPLMQEDIFYSLIEDAKTRGVWRDLSANQ FKNSKSISNVSTHLASNNLNLASRDTPIKSPSVGICEEKQEAHKVKKRHNIDSANLSR GTERDEDIPNKRAKNKVSTDQTAADNKVTKPRLDESSSSKQDVLNKIDESEIEQASSK KPGYVEKNKDKGHMKKSKKPKSKLALAAMAHGFAPPKVEHFKRK" ORIGIN 1 ttagaaacct agattttgaa aaattgcagt cgcgctttaa taagtctact tcgagagtga 61 gaatgcagca ttagcttgtg gttatggaaa atgacgaggc ttttgataga ttaataagaa 121 aaattcagga aaatcaaaaa cacccatctt tcgaagggtc caataaagtt ttgcatttgg 181 cgctttcata cctaaatact aacagacaaa accctcattg ggtttgtgat cctaaattac 241 aagtagcagt tcgtgaatgt ctttttctat tttcttttca aaatgataac gagtatctgg 301 tatggttcaa aaaacatttg aacgaacgcc ttcagttatg ccccaaatgt atagttaaat 361 atcaccaatc tttagatgat ttcaaaagtc tatgtttaaa catttttcac tttgacccaa 421 atactcttga gattgtaatg gagaaaattt atagttggga catttttcgg ttacaggaag 481 ttctcaaaac agtgcctaaa atcgacacgt cctcggcctc taaacctata ctatgcgcct 541 tctacgaaat cttatactct cctcgtattt tacataataa agaaatcttt cccttgttcc 601 gaaacagatt tcttgagtcc ggttttcttc ggctctcgaa aaacctagtg ccaggtgtca 661 taagtcttct cttctcgaga gatgatgagc tccgaagatg ggcttgcagt attttaagtg 721 atgtaaaaac aatctccgat aatgaattta aaatccttga gggtcccctt cttcaggaaa 781 ttcgttcttt agaccagaag aaagaaaatg agaacgagat gcaaattttt ctgaaaggtt 841 tatcgttgct gttaaagcat gttgatcatc tttattttag gggacttaca ggaaaaaatt 901 tcaatgtcgc cgattttatt ctttcgggat tgcaaagcga ccatactaat ttatgtccgt 961 ctttccttgt atgtttacat tctttgttat actgctatgg acgtaatttt tggacgccag 1021 aaatttctcc cagtgaagta atagataaaa tttttaatgg taatgcttat aagaggtgga 1081 cagaagaaaa tacatccaat ttttcaaacg accaaaaggc agagaatccg tttgaatggg 1141 ctacctctct tttgaagaca atttcaatca ttgatgaagt tgaattaatt aacaaaattt 1201 tgattaatta caccatgcaa tataaaaagg aactggaagt cggtttcaaa aatgttcagt 1261 tacttcaatc acttgctgac atattttcag ttttgttttc cgaatatttt atgattttcc 1321 cccatagtga tcaaagttta caaaacaaag tatttgaatt acattccact ttagcgatta 1381 agtttgacga gctgtttcgt ttgctaaact tggaaaatga agagtctgtt gaatggaggc 1441 ttattaagaa agtttttgaa taccgattga atttagatct ttatattttg aagcaattct 1501 attgccatta tttggacaga aatagaaagc cacccttgaa tatcaaatcg gtaagtgagt 1561 cttttaaaaa tttttgggta tatttgcaaa acgtatttcg agaggagaag ttctttatgg 1621 ttcgtattgt ttttcgtgct tgctctacag tttgcttgat tgataagttg ccgcctaaga 1681 aagttgacat tccgttcaaa agtgatttcg aaaatgcact aaacggattt gttgcaacat 1741 tttctgaaat gcttattcag actcaatgtt ggcatttgtc ggcacaaacc caattggttt 1801 caaatccttt aacttttcgt ggaatctttt cactcgtttt ttctccaatt cttgagatct 1861 caacaggaag tatctcaatt attaaatcta tttcgctttc tgacagcgtt gttgatacta 1921 taggagagct attgagaagc cagttttcaa atacactaaa ttcttcatgt tatgttcttc 1981 tgcagtggct taaagtcaga aactttggag gagccaagca cattgtttat tttaataaat 2041 taattataaa cactattttt gactctgttg atggcttaac ttctaaggat gcgacttttg 2101 caaaacaagt ggaaaagaaa gaatccctta agaatttctg ggaatcgtta tggaaattct 2161 ttactcattt tttcattgtt cttcctactt ggccagttca tgataaggac aatttagttg 2221 atttaatgcg ggataccctt gatttttgcg atatgctcat taatattttt gaggaagtta 2281 acggattcat ttttggatta tcggataacg atattaaaat tgtttcggct aatgataagg 2341 gcagtgcttt agctatgtgt atagctgatt ctttggttac tgtatcttat tggcttaagt 2401 taactgattc ttcacttcta acatccgttg tgaaagtgat ttgtaaaatg cttaaaattt 2461 gtaaaaagtt ggagtgtcca attagtcaaa atgtgattga tattatccat agggcatcaa 2521 ttaccagtga tgaacaaaca attcttacat tcactgagag agaggatctt tttatatcgc 2581 tcacaccata cctttcagaa gacgttctta atcactctcc tttcaatgat accaatacgc 2641 ttgaaactaa gttacagagt gatgatcggg gtttgctttc taaagaccag actattggga 2701 ttgcgaaaaa attacctgag tcaaacatta gtacttcaaa tcattttttg cttcctccga 2761 aggctatttc tgcttctaaa gccatcaata gaaatgctca aaaatctcaa aatttaaatt 2821 ttttgaaatc taaacaagag acaacacagc gaattcgcga atccgcgaaa gttccaagaa 2881 ccagtgcggg gaaccatctt tctgagaaac ttaattcgga taatcatata ccaaaagctt 2941 tgcaaaagct cgattctgct gacccaattc gcaagccttc acttttgcac acttctaaaa 3001 gttattctaa tccagatgac aaaaatactt caacttccga tgaagatacc tcggagtccg 3061 aagaagagtc tagtaacggt ctattctcgc ttgcacgtga agctaattct catgcctcta 3121 aatctcttcc acaaagaagg cagattcagt tcttggactt tgattccctt aaaacaaaaa 3181 atgtagttca tcctactcaa ttgcgccgta atactcaaca aagtgcacaa cttgctcgac 3241 tccggctaaa ccctgatgtt caagagtttt acaaagtaat tttgggttgg aacccattag 3301 ctgattcttt ttcggcgtct aatgttgaga tgcagtgcgt ccaagctaaa ttcacgtata 3361 atgattcaaa cgcttatgag aaagttttca aaccaatgtt gtttcatgaa tgttgggctc 3421 aagtgaaaag tgccgttgaa gaaaagcaat accctcccat agatttaatc ctcaacaccc 3481 gcagtacagt tgataacttt gtcgatattt actttacgtc ctgttcacct accgaagtct 3541 cttttttaag tgatacagat atttgcttac tgtcaaaatc acaaagttcg ggcgatacta 3601 ataacccaaa atcttttcag ttgtgcaaaa ttcaatccat ttctcgtaaa aaagaatcac 3661 ttgaactctg tctgcggatg aatattgaat caattgatct acaggagtat gcaccgaaca 3721 ttaggttcac agcacaaaaa ttatttaatg ctactactag cttacgtgaa tttgctgctt 3781 taaaatctct tcgccattta ccattgtctc agagaattct ggatgccaat gtaacgcgtc 3841 taccttcaaa ttttacagat gacaaaaagc aaaaaataat gaagtcttat ggtgtaaatg 3901 aaccccaggc atatgcgatt tatgcatctt ctgtaaatga tggttttacg ctcattcaag 3961 ggcctcctgg aactggaaaa actaaaacca ttctaggcat gattggagct gtacttactt 4021 cttctagtca agggttgcaa tttaatgtcc caggacagac gcgaaaaacc tcaaagaata 4081 agattttaat atgcgctcct agtaatgcag ccatagatga aattctcctt cgtatcaaag 4141 ccggtgttta cgatcatgag ggtatcaaat tttttccaaa agttattcgt gttggatttg 4201 gtgactccat aagcgttcac gctaaagaat ttactttgga agagcaaatg ataaagcaaa 4261 tggaacttac gaacctaaag aaagatcaag aagcaaacaa ttccagtgat actcggaaaa 4321 aatatgactc aattattaaa aaaagggact ctttacgcga agatctagaa aagtttcgta 4381 gtactggaaa aaatagttca atattggaag cacagcttcg tgagattacc aaacagaaaa 4441 acatgcttga acagagcctt gatgatatga gagaacgtca acgctcaact aatcgtaatc 4501 tggatgtttt gaaaaaacaa atacaaaatc aactacttca ggaagctgat attgtatgtg 4561 ctaccttatc tgcgagtggt catgaactac ttttaaatgc gggtttgact tttcgaactg 4621 tcataattga tgaagctgca caagccgttg aattaagttc aatcatacct cttaagtatg 4681 gctgtgagag ctgtgtaatg gttggtgatc cgaatcagct tcctcctact gtgctatcaa 4741 aaacctctgc aaagtttgga tattcacaat ctctatatgt cagaatgttc aaacagcata 4801 atgagagcgc ttgtcttctt agcatacagt atagaatgaa tcctgaaatt agccgatttc 4861 ccagcaagtt tttctataat tcaaaactac ttgacggtcc caatatgtca gcagtgacat 4921 ctcgaccttg gcacgaggat ccgcagctag gtatttatcg attttttaat gttcacggga 4981 cggaagcttt ttccaactca aagtctctgt acaatgtgga agaggcttcg tttattttat 5041 tattatatga gaggctaatt caatgttatc taaacattga ttttgagggg aaaattggag 5101 ttgttacccc ttatagaagt caagtacaac agcttcgatc acaatttcaa agaaagtatg 5161 gttccattat attcaagcat cttgatattc ataccgtcga tgggtttcag ggacaggaaa 5221 aggacattat aattttttct tgcgttagga gttcgatgag cggtggaatc ggtttccttc 5281 aagatcttcg tcggcttaat gtagctttaa caagagctaa atcatctttg tatatcgtag 5341 gcaattctaa accgctaatg caagaggata ttttttatag cttgattgaa gacgcaaaaa 5401 ctcgtggtgt ttggagagac ttgagtgcta atcaatttaa gaactcaaaa agtatatcaa 5461 acgtttcgac acacctcgca tctaacaatt taaatttagc ctcacgggat accccaatta 5521 agtcgccgtc ggttggtatc tgtgaggaaa aacaagaagc acataaagtc aaaaaacggc 5581 acaatataga tagtgctaat ttgtcaagag gaactgagag agatgaagat ataccgaata 5641 agcgcgctaa gaacaaagtt tccactgatc agactgctgc tgataataag gtcacgaaac 5701 cacgccttga tgaatcatcc agttccaagc aagatgtgtt aaacaaaata gacgaatctg 5761 aaattgaaca agcgtcttcc aaaaagccgg gttatgtgga aaaaaataaa gataaaggcc 5821 atatgaaaaa atcaaaaaag cccaaatcga aacttgctct ggcggcgatg gcccacggtt 5881 ttgcacctcc aaaagttgag catttcaaaa ggaagtagcc gatttaggtt ttagtatgag 5941 tattttacag tattactttt ttaataacac gagtagcggg acgttttcaa tcatttgaat 6001 cttagacata gtttatttat taatatttct cctatctaaa aatgattttg cttacaacaa 6061 c //