Dbfetch
LOCUS NM_001021477 6332 bp mRNA linear PLN 14-JUL-2022
DEFINITION Schizosaccharomyces pombe putative COPII-coated vesicle-associated
protein Sec31 (sec31), mRNA.
ACCESSION NM_001021477
VERSION NM_001021477.2
DBLINK BioProject: PRJNA127
BioSample: SAMEA3138176
KEYWORDS RefSeq.
SOURCE Schizosaccharomyces pombe (fission yeast)
ORGANISM Schizosaccharomyces pombe
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina;
Schizosaccharomycetes; Schizosaccharomycetales;
Schizosaccharomycetaceae; Schizosaccharomyces.
REFERENCE 1 (bases 1 to 6332)
AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R.,
Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D.,
Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T.,
Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P.,
Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D.,
Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S.,
Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M.,
Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S.,
Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S.,
Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S.,
Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M.,
Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G.,
Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J.,
Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I.,
Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C.,
Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D.,
Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H.,
Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H.,
Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S.,
Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z.,
Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C.,
Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L.,
Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A.,
Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L.,
Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V.,
Ussery,D., Barrell,B.G. and Nurse,P.
TITLE The genome sequence of Schizosaccharomyces pombe
JOURNAL Nature 415 (6874), 871-880 (2002)
PUBMED 11859360
REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to
Cerutti L]]
REFERENCE 2 (bases 1 to 6332)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (13-JUL-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 6332)
AUTHORS Wood,V.
CONSRTM The Schizosaccharomyces pombe Genome Sequencing Consortium
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2007) European Schizosaccharomyces genome
sequencing project, Sanger Institute, The Wellcome Trust Genome
Campus, Hinxton, Cambridge CB10 1SA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. This record is derived from an annotated genomic
sequence (NC_003423).
On Dec 10, 2012 this sequence version replaced NM_001021477.1.
FEATURES Location/Qualifiers
source 1..6332
/organism="Schizosaccharomyces pombe"
/mol_type="mRNA"
/strain="972h-"
/db_xref="taxon:4896"
/chromosome="II"
gene 1..6332
/gene="sec31"
/locus_tag="SPBC8D2.20c"
/db_xref="GeneID:2541273"
CDS 169..3843
/gene="sec31"
/locus_tag="SPBC8D2.20c"
/codon_start=1
/product="putative COPII-coated vesicle-associated protein
Sec31"
/protein_id="NP_595582.1"
/db_xref="GeneID:2541273"
/db_xref="GOA:O13637"
/db_xref="InterPro:IPR001680"
/db_xref="InterPro:IPR009917"
/db_xref="InterPro:IPR015943"
/db_xref="InterPro:IPR017986"
/db_xref="InterPro:IPR019775"
/translation="MRLKDISKTATLAWSPRGVNDNQALLALGGYTGTEGSKNSDTLL
ELWNENPESQKPVGSIDVKTRFYDLAWEKSLDKPMGVIAGSLEDGGIGFWDPAAILKS
DEASASIATYKSENGSILGPLDFNRLQPNLLASGDNKGDVWVWDIKHPQQPFALPKQN
RSSEVHVVSWNNKVSHILASGNATEYTTVWDVKLKRQVLNLSYLGAAGVSAATGAVNS
IAWHPNNATRLATAIDDNRNPIILTWDLRQPTVPQNILTGHQKAALSLSWCPEDPTFL
LSSGKDGRAMVWNVETGESLGSFPRSGNWYTKSSWCPSNSNRVAVASLEGKVSIFSIQ
STNTDKSQEASIKGATSIDDNEFFNNLPSIAGSQEPSFSLPLAPKWFKVPVGARFGFP
NKIVSFSPNSKEVTITSAPDEVEQDEAKSFHSSAKFQTEKEITDFCQKGVEESASEEE
AINWKLLMAVSKRASRSKFAELLGYKTLKPKNDEDDSKVDESVAKDSTTPNELSKNAN
NENYDDDSSFYGKLAESVQEVSIADKKDAEIVKDSFKIFNPEDSDLEKNITEALLTGD
VLSAVKACLEEKKISEALFLSTFGGKECRKCVRDAFYELQEHKPSYMRLSACIADNDL
QNVVDNAEVSEWKDIFVFICTYATDDEFAPLCSTLGQRLEDLEDEKSIRSAEFCYIAS
KSLQSYANLWLKQLATSTKTSKAASAYGAYVEQLTKLMDKVSMFRSIVVYKDDELSAT
KDWKLAGLYEVYIAYAKILSASGKFDDAMSYLNLVPTEFPGAKEEIQRLTMLLEPHAV
PPIHQIKQTGYAPVQPKTSQASSILPTVPRTTSYTSPYATTSSHITPADVHPLPPPST
STTAGWNDAPMLGQLPMRRAAPSMAPVRSPFPGASSAQPAAMSRTSSVSTLPPPPPTA
SMTASAPAIASPPPPKVGETYHPPTASGTRVPPVQQPSHPNPYTPVAPQSPVAAASRI
SSSPNMPPSNPYTPIAVASSTVNPAHTYKPHGGSQIVPPPKQPANRVVPLPPTASQRA
SAYEPPTVSVPSPSALSPSVTPQLPPVSSRLPPVSATRPQIPQPPPVSTALPSSSAVS
RPPIATSAGRSSTAASTSAPLTYPAGDRSHIPGNLRPIYEMLNAELQRVSQSLPPQMS
RVVHDTEKRLNMLFDRLNSNVLSKPLTDELLALATSLNAHDYQTASNIQTNIVTTLGD
QCEHWIVGVTRLITLSKSTT"
ORIGIN
1 actactacca catgtggact atatgtatta aaagaaacta ctaagaacca accactttaa
61 gagcccacac atcataccaa acaaaaaacg ggttagctcg cctgttatac tatagttgaa
121 acaggataaa aaggagtttt tacaatattt cacaagttgg tgtgagttat gagactgaag
181 gatataagca aaacggctac gttggcgtgg tcgccccgcg gggtgaatga taaccaagct
241 ctgttagcgt taggaggata taccgggacg gagggttcta aaaacagcga caccttgctt
301 gaattgtgga atgaaaatcc tgaatcacaa aaacccgttg gatctatcga cgtgaagact
361 agattttacg atttagcatg ggagaaatcg ttagataagc ccatgggtgt aatcgctggt
421 agtttagaag atggcggtat tggattttgg gatcctgctg ctattttgaa atcagatgaa
481 gcgtccgctt caattgctac ctataaatcc gaaaacggct cgattctcgg ccctcttgat
541 ttcaatagat tacaacccaa tcttttagcc tctggtgata ataaaggtga tgtttgggtt
601 tgggatatca agcatccaca acagcctttc gctctcccaa aacaaaatcg ctcctccgaa
661 gttcatgtgg tttcttggaa taacaaagtt tcacatatct tagcttctgg taacgctact
721 gaatacacta ccgtttggga cgttaagctt aaacgccaag tcttgaatct atcatatttg
781 ggtgccgccg gtgttagcgc agctaccgga gcggttaaca gtattgcttg gcaccctaat
841 aatgccactc gccttgcaac tgctattgat gataatagaa accccatcat cctaacgtgg
901 gatttacgcc aacctactgt tcctcaaaac atccttaccg gacaccaaaa ggctgcactc
961 tctctttcgt ggtgccctga agatccaacg tttttgctaa gtagtggaaa ggatgggcgt
1021 gctatggttt ggaatgttga aactggcgaa tctttgggca gttttcctcg ttctggtaat
1081 tggtatacaa aaagctcttg gtgtccttct aattccaatc gtgttgctgt cgcttctttg
1141 gagggtaagg tatctatctt ttcaattcaa agcacaaaca ccgacaagag tcaagaagcc
1201 tctattaaag gtgctacctc catagatgat aacgaatttt ttaacaattt gccctccatt
1261 gctggatcac aagaaccttc gttttcacta cctcttgctc ccaagtggtt taaagtacct
1321 gttggtgctc gatttggctt ccccaacaag atcgttagtt tttcgccaaa ttctaaagag
1381 gtcactataa cctctgctcc cgatgaagtt gagcaagatg aagctaagtc cttccattct
1441 tccgccaaat ttcaaactga aaaggaaatt actgattttt gtcagaaagg tgtggaagaa
1501 tccgcctccg aagaggaggc cataaattgg aagctactta tggccgtcag taagcgcgct
1561 tctaggtcta agtttgctga acttttgggt tataagacat taaaaccaaa aaacgatgag
1621 gatgacagca aggtagacga gtctgttgcc aaggattcaa caacacctaa tgaactttca
1681 aagaatgcta ataatgagaa ttatgatgat gattcctctt tttatgggaa attagccgaa
1741 agtgtgcaag aagtatctat agctgacaag aaggatgctg agattgtaaa agattcattt
1801 aagatcttca atccagaaga ttctgactta gagaaaaaca tcactgaggc gcttcttacc
1861 ggtgatgttt tatcggccgt gaaagcttgc cttgaggaga aaaaaatatc tgaagcactt
1921 ttcttatcca cctttggtgg taaggaatgt cgtaaatgcg taagagacgc gttttatgaa
1981 cttcaagaac acaaaccttc atacatgcgt ctatctgcat gtattgctga taacgattta
2041 caaaatgttg tagataacgc agaggttagt gaatggaagg acatttttgt gtttatttgt
2101 acctatgcaa ccgatgatga gttcgctcca ttgtgcagta ctttgggaca gcgtcttgaa
2161 gacctcgaag atgagaaatc tatcagatct gctgaatttt gttatattgc tagcaaatca
2221 ttacagagtt atgctaacct ttggttgaag cagctagcta cttcaactaa gacatctaag
2281 gcagcttcgg catatggtgc ttatgtggaa caacttacta aactgatgga taaagttagc
2341 atgttccgct ccatcgttgt ctacaaagat gatgagcttt cggcaacgaa agattggaag
2401 ttggctggtc tttatgaggt ttatattgca tacgctaaaa tcttgagtgc ttcaggaaaa
2461 tttgatgatg ctatgagcta tcttaatctt gtacctacag agttccctgg cgcaaaagaa
2521 gaaattcaaa gattgaccat gttgcttgag ccccatgcag tccctcctat ccatcaaatt
2581 aagcaaactg gatatgcgcc tgtacaaccc aaaacttctc aagcgtcctc catacttcca
2641 acggtgccac gaacgacttc atatacttcg ccttatgcta caacatcatc ccacataacg
2701 cctgctgatg tccacccact tcctcctccc agtacgtcta ccactgctgg atggaatgat
2761 gcccccatgc ttggtcagct acctatgaga cgtgctgctc cttctatggc cccggtaaga
2821 agcccattcc ctggtgcttc aagtgctcaa ccagctgcaa tgtcccgtac tagcagcgtt
2881 agcacccttc ctcctcctcc tcctactgca tccatgactg caagcgctcc cgctatagca
2941 tcaccacctc ctcctaaggt cggtgagact taccaccctc ctacggcaag tggtacgcgt
3001 gttcctccag tgcaacaacc cagtcatcca aatccttata cacctgtagc accccagtca
3061 cctgttgctg ctgcttctcg tatttcttcc tctccaaaca tgcctccctc aaacccttat
3121 acaccaattg cagtggcttc ttcaactgtt aaccctgctc atacgtacaa gcctcatggc
3181 ggatctcaga tagttccacc tcctaaacaa cccgctaacc gagtggtgcc tttaccaccc
3241 acagcttctc agagagcttc tgcttatgag cccccaaccg tcagcgttcc ttccccatcc
3301 gctctttctc cctccgtgac acctcaactc cctcccgttt ccagccgttt acccccagtt
3361 tctgctacaa gacctcaaat tcctcaacca cctcctgtca gtactgcgct tccaagctct
3421 tcagcagttt cacgacctcc aattgcaacg tctgcaggcc gttcttctac cgctgcatca
3481 actagtgcac cattgacata tcctgctgga gatcgtagtc atattcctgg taacttgaga
3541 cctatttacg agatgttaaa tgctgaactg cagcgtgtat cccagtctct accccctcaa
3601 atgtctcgtg tagtccatga tactgaaaag cgattaaaca tgctgtttga tcgccttaac
3661 tctaatgttt tatcaaaacc tttgactgac gaattactcg cccttgctac ttctttgaat
3721 gctcatgatt atcaaactgc gtcgaatatt caaactaaca tcgttactac acttggtgat
3781 cagtgtgaac attggatcgt tggtgttacc agacttatca ctttgagtaa gtctactacc
3841 taaacgaaat caaaattacg tttttaagta ttaggcattt gatattagtt tgatgtttag
3901 ctatttagcc tcatgtagct aaggaaggtg aagggaaata gttttgtgaa ggatctatat
3961 ttatattgtt gatgtttatg acatgacttt accgtttgca gcctggtaca ctttaagttg
4021 tgatagcatg aaactggcga atttcatgaa actgcaactt cttttgtaga ctctttgatc
4081 cctaaacatt tagaggcttg atgaaaatag ttcgccgaat agcacattac gttgacatta
4141 atttccatat ttgtttttaa gtacttagta agaatccccg ttgtttaaaa ggttttatgc
4201 gggtaatgtt aaatacaagc ttatccagag tcctgttaat cggtaaagtt gattcggatg
4261 agatgagata gtcgatgaat tcttgaaata acttcagatg gaaacatgaa tgccgataaa
4321 ataattagtg tccaagtttc tcttcatttg cattttactt tcactcatgg cgaacttaga
4381 tgtaagcttt tactggtttc gaattttgca tggtcattac atatgttttg aacttcagca
4441 ggattaggag ttgagtattc taaaactgaa gtcatttcca tcccactttt ctggagtagt
4501 aagcatgacg cgacaccttc cttattggat tcatcaggtt gtgaacatga aggaacaatg
4561 gaatctcgta tttcgttttc ttttttaaac ggtattttct ccgttatcaa tatgtcttta
4621 gacgaaggaa ttctgtcgcc aacagtctca ttaaaagcgt ttatcgcaat gttacttcca
4681 ttagaaggcg gtttatacga tgggaggtaa tcaatcgaag ttaataaata atcgatctgt
4741 tcgttctcgc taaagaatac cgattcatga agctcacctg gcttcagcga gatggctggg
4801 acattacttg aagctatagg gttcgcaaga tgtccggtgg attccttagc attaatcggc
4861 ttttcggttt ttacgtgcgg ttgagaacca tgcgaatcag gaaatacact tttcaccgaa
4921 ctcacaaatt cggatagatt tttttttagc caacccactc ttcttgttga tttcttatcc
4981 tcccttgaaa ttggaaatcc caaattttgc tctaccttgg gattgctgat tttctgtgga
5041 acagaatttg actttgatgc acttggaggt aaaggaaaga acacctcttt acaatatttg
5101 gctgttggcc gtacatcggg gttccaagct aacaaacaag gaatcatctt tgcatgacct
5161 tctggacaat tttgcggaag caacttctgg atgggatatg gttttgttgg aggaagcata
5221 aatcccagtc tctttgctaa ttctttcgct tgagaccaat aatgtagtgt atctaattca
5281 tcaattcctg gattgcccaa aatttcgcag acgcgattga gttggtcggt ctcattccta
5341 ccagggaaga gaggttttaa agagtaaatc tcgaaaacaa tgcatccaaa tgcataaaga
5401 tctacagaat ggttatatga tccacttcgt aacaatagct cgggagcccg ataccaacgc
5461 gtcgatacat actcagtcaa tgggtcactt gaaacagatg gacgcgctaa gccaaaatct
5521 ccaagtttta tggagtacct tgacgaaatg ggcttgggac tgatcctttt gacaagaata
5581 ttttcaggtt tgatatctcg atgcatgaat ccatgcttgt gaatatgctc gattccactg
5641 attatttgca gaagtatatt aaatgctgtt tcctttgtga aaagtcttcc ttgccgcctt
5701 ttaaaaagct ggaatagatt gcaatccata aactccataa ctaaaaatat attgcgatag
5761 gggtccataa acgtctccaa gagatcgatt aaacaaggat gctttgaaat ttttcgtaat
5821 gcctttttgt tagactcgta gataatagga tttaaaaaat gcatgcgata aacacagtaa
5881 ttcaattttg tcgagcttga gctgaacgac gttgaaacat ctttggtttc ttcttctaag
5941 attttaagta cttaccaagg attctctcag cttcaaaagt tcatgctttg gtttgggctt
6001 gctactgttc tttaatttct tcaccgcaac cttcacaatt gttagatttc agaagtttgt
6061 tttattcttt tcttactgtt tcgtaaagtc cgtttttttc ttttctttga gctaaatata
6121 ccgttccaaa gctgccatca ccgagctttt gcttaaccaa atatctatct tcaaatatga
6181 cttgtgtcaa atctaacact gagtaaatac tttcattact cattgtatct gtgttttcag
6241 taaaatatgt atagtggtag aaatagaagc tgagaatggg tttgtttatg tttgtttaca
6301 ttccaacata ttacgcgctt ggctgcattt ac
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