Dbfetch
LOCUS NM_001021464 3556 bp mRNA linear PLN 14-JUL-2022 DEFINITION Schizosaccharomyces pombe putative isoleucine--tRNA(Ile) ligase Irs1 (irs1), mRNA. ACCESSION NM_001021464 VERSION NM_001021464.2 DBLINK BioProject: PRJNA127 BioSample: SAMEA3138176 KEYWORDS RefSeq. SOURCE Schizosaccharomyces pombe (fission yeast) ORGANISM Schizosaccharomyces pombe Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces. REFERENCE 1 (bases 1 to 3556) AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R., Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D., Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T., Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P., Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D., Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S., Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M., Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S., Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S., Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S., Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M., Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G., Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J., Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I., Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D., Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H., Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H., Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S., Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z., Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C., Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L., Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A., Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L., Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V., Ussery,D., Barrell,B.G. and Nurse,P. TITLE The genome sequence of Schizosaccharomyces pombe JOURNAL Nature 415 (6874), 871-880 (2002) PUBMED 11859360 REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to Cerutti L]] REFERENCE 2 (bases 1 to 3556) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (13-JUL-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 3556) AUTHORS Wood,V. CONSRTM The Schizosaccharomyces pombe Genome Sequencing Consortium TITLE Direct Submission JOURNAL Submitted (29-JUN-2007) European Schizosaccharomyces genome sequencing project, Sanger Institute, The Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_003423). On Dec 10, 2012 this sequence version replaced NM_001021464.1. FEATURES Location/Qualifiers source 1..3556 /organism="Schizosaccharomyces pombe" /mol_type="mRNA" /strain="972h-" /db_xref="taxon:4896" /chromosome="II" gene 1..3556 /gene="irs1" /locus_tag="SPBC8D2.06" /db_xref="GeneID:2541245" CDS 145..3339 /gene="irs1" /locus_tag="SPBC8D2.06" /EC_number="6.1.1.5" /codon_start=1 /product="putative isoleucine--tRNA(Ile) ligase Irs1" /protein_id="NP_595569.1" /db_xref="EnsemblGenomes-Gn:SPBC8D2.06" /db_xref="EnsemblGenomes-Tr:SPBC8D2.06.1" /db_xref="GeneID:2541245" /db_xref="GOA:O13651" /db_xref="InterPro:IPR002300" /db_xref="InterPro:IPR002301" /db_xref="InterPro:IPR009008" /db_xref="InterPro:IPR009080" /db_xref="InterPro:IPR013155" /db_xref="InterPro:IPR014729" /db_xref="InterPro:IPR023586" /db_xref="PomBase:SPBC8D2.06" /db_xref="PomBase:SPBC8D2.06.1" /translation="MSFNVPKEEEKIVEFWREIDAFHTQLKLSQGRPTYTFFDGPPFA TGRPHHGHLLASTIKDSVTRYACLKGYHVERRFGWDTHGLPVEHEIDKKLGITGSDDV MAMGIDKYNAECRKIVMTYASEWRATVERLGRWIDFDNDYKTLYPSFMESVWWVFKEL HTKGKVYRGYRVMPYSTACTTPLSNFEAQQNYKEVPDPAIVVAFQSISDPEVSFLAWT TTPWTLPSNLALAVHPDLQYIKILDKDSNKKYILMESCLGILYKNPKKANFEILERFQ GKALDGQKYEPLFPYFKSTFGERAFKLYSADYVEEGSGTGIVHQAPAFGEADYDAAWA AGIIDADHQPPCPVDEQGLLTSEITDFAGQYVKDADKEIIRSLKASGHLVKHSQIFHS YPFCWRSDTPLIYRAVPSWFVRVKEITNEMVENVMSTHWVPQNIRDKRFANWLKNARD WNISRNRYWGTPIPLWVSDDYEEVVCIGSIKELEELSGVSNITDIHRDSIDHITIPSK KGKGTLHRVSEVFDCWFESGSMPYASRHYPFERIEEFKHGFPADFISEGVDQTRGWFY TLTVLGTLLFDKAPYKNVIVSGLVMAEDGKKMSKRLKNYPEPNLIIEKYGSDALRLYL INSPVVRAEILKFKEDGVREVVTRVLIPWWNSYKFFEAQAALYKKVTGKDFVFDDAAT LSSNVMDRWILARCQSLIGFVDEEMKQYRLYTVVPQLLGLIEEMTNWYIRFNRRRLKG EDGEIETINALNVLFEVLFTLVRIMGPFTPFITENIYQHLRNYMPIDKNEISLRSVHF LPFPTYKSELDDETVLRRVKRMQTIIELARYVREQNNISLKTPLKTLIVILTNEEYLE DAKLLERYIAEELNVREVVFTSNEEKYGVVYSVQADWPVLGKKLRKDMARVKKALPNV TSEEVKEFQKNKKMVLDGIELVEGDLQIIRSVEVKNEFLKSNTDGICIVLLDIEIDAQ LQAEGLAREVINRVQRLRKKSNLQVTDDVRMTYKIKNDTIGLESAVDSNEALFSKVLR RPIEKETGADESNIIASEEQDVQGATFLLSLLRL" ORIGIN 1 gtatcggatt tgatcgcaat caatctgaat acaaaattgt tttgtgtaca tattcctctc 61 cttccacacc taaacttctt gtaagaccga tttccggaag cattgctgaa ttagctcttt 121 tgcctaccgt aaaagtattt cagcatgtcg tttaacgttc ctaaagaaga ggaaaaaatc 181 gttgagtttt ggcgcgaaat cgatgcgttc catactcagt taaaactttc tcaaggtcgt 241 cctacttata catttttcga tggacctcca ttcgctaccg gtcgtcctca tcatggtcat 301 cttttggctt ctaccattaa ggatagtgtc acccgttatg cttgcttgaa gggttatcac 361 gtcgagcgta gattcggttg ggatacacat ggacttcctg ttgagcatga aatcgacaaa 421 aagttgggta ttactggaag tgatgatgtt atggctatgg gtattgacaa atacaatgcc 481 gaatgtcgta aaattgtcat gacttatgca tccgaatggc gtgcaacagt tgaaagactg 541 ggccgttgga ttgattttga taacgattat aaaacgttgt atccttcttt catggaaagt 601 gtttggtggg ttttcaaaga gttgcataca aaaggaaaag tttaccgcgg atatcgtgtt 661 atgccttact cgactgcatg tacaacacct ttgagtaact ttgaagctca acaaaactat 721 aaggaagtcc cagatccggc tattgttgtt gcctttcaat ccattagtga tcctgaagtt 781 tctttcttag cttggactac tactccatgg accttgcctt ctaaccttgc tttggctgtt 841 caccctgact tacagtacat aaaaattttg gacaaggatt ctaataagaa atatatcctt 901 atggagagct gccttggcat cctttacaag aacccaaaaa aggcgaactt tgaaattttg 961 gaacgtttcc aaggaaaggc cttggatggt caaaagtatg aacctctctt cccttatttc 1021 aagagcactt ttggcgaaag agcatttaaa ttatattctg ctgactacgt tgaagaaggc 1081 agtggtactg gtatcgtcca tcaagctcct gcttttggtg aagcagatta tgacgctgct 1141 tgggctgctg gcatcatcga tgctgatcac caacctcctt gccctgttga tgagcaaggt 1201 ttgcttactt cggaaatcac agacttcgct ggccaatatg ttaaagacgc agataaggaa 1261 attatccgct ccttgaaagc atctggccat ttggttaagc atagtcaaat tttccatagt 1321 tatccatttt gctggcgttc cgatacacct ctaatttatc gtgccgttcc cagttggttt 1381 gttcgcgtga aggagatcac taatgagatg gttgaaaatg tcatgagcac tcactgggtc 1441 cctcaaaaca ttcgtgataa acgttttgcg aattggttga agaatgctcg tgactggaac 1501 atttcccgta acagatactg gggtacccct atcccacttt gggttagtga tgactacgaa 1561 gaagtcgttt gcattggttc cattaaggag cttgaagaac tttccggcgt ttctaatatt 1621 acagacattc atcgtgacag tattgatcat atcactattc cttctaaaaa aggtaaagga 1681 acattgcatc gtgtcagtga agtatttgac tgttggtttg aatctggcag catgccttat 1741 gcttctcgtc attacccttt cgaaagaatt gaggaattca agcatggctt ccctgctgac 1801 tttatttccg agggtgttga tcaaacccgt ggatggtttt atactttaac tgttttggga 1861 actttgttat tcgacaaagc accttataaa aatgtaattg ttagtggtct ggtaatggct 1921 gaggatggta aaaaaatgtc caaacgtctt aaaaattacc ctgaaccaaa tctcatcatt 1981 gaaaaatatg gttctgatgc ccttcgtttg tatctcatca actctccagt tgttcgtgct 2041 gagattctta aatttaagga agatggtgta agagaagttg ttactagagt tttgattcct 2101 tggtggaaca gttataagtt ttttgaggcg caagctgctc tttacaagaa ggttactggt 2161 aaagactttg ttttcgatga tgctgccact ttgagttcca atgtaatgga tcgctggatt 2221 ttagctcgtt gccagagctt gattggattt gttgatgaag aaatgaaaca ataccgtttg 2281 tacaccgtgg tccctcaact tctcggttta attgaggaga tgactaactg gtatatccgg 2341 tttaacagac gtcgtttgaa gggtgaagat ggtgaaattg aaactattaa tgctttgaac 2401 gttttgtttg aagtcttgtt cacgttagtt cgtattatgg gcccattcac ccctttcatt 2461 actgaaaaca tttatcaaca ccttagaaac tacatgccta ttgacaaaaa tgaaatttca 2521 cttcgttcag ttcatttcct tcctttccct acttacaagt ctgagcttga tgatgaaact 2581 gttttacgcc gtgttaagcg tatgcaaact attatcgaat tggcgcgtta tgttcgtgag 2641 cagaataata tttctttgaa gactccctta aaaaccctta ttgttattct cactaacgaa 2701 gaatacttgg aagatgctaa gctcttagaa agatatattg cagaggagct taacgtccgt 2761 gaagtagttt tcacctccaa tgaagagaag tatggagtcg tatacagcgt tcaagcagat 2821 tggcctgttt tgggtaagaa gcttcgcaaa gatatggctc gtgttaagaa ggctctacca 2881 aatgttactt ctgaggaagt taaagagttt cagaagaaca agaaaatggt tttggatggt 2941 atcgaacttg tcgagggaga tttacaaatt attcgttctg tggaggttaa gaacgagttt 3001 ttgaaatcga acactgatgg catctgtatt gttttattag atatagagat cgatgctcag 3061 ttgcaagctg aaggtttggc tcgcgaagtt atcaaccgtg ttcaacgttt gcgcaagaag 3121 agcaatttac aagttacgga cgatgttcgt atgacttata aaataaaaaa cgatactatt 3181 ggtctcgaat ctgctgtaga ttccaatgaa gccttatttt cgaaggtatt gagaagaccc 3241 atcgaaaagg aaactggtgc tgacgagtca aacataattg cttccgaaga acaagacgtg 3301 caaggagcta ccttccttct cagtcttctt aggctataga aatagttcaa cttcagcaga 3361 agtattcttt ctcaaaattt gtagtcttag gaatgtatct cgactcctac gttttgttta 3421 ttattttata atataatgga ttttcctatg tactactcct gatttatgta gtgagaaata 3481 tttaagaagg gttttgattg tcaaaaaaaa taataaatat tatttacaca cgtaacaaaa 3541 gaaaataatg tttcac //