Dbfetch
LOCUS NM_001021249 3891 bp mRNA linear PLN 14-JUL-2022 DEFINITION Schizosaccharomyces pombe ubiquitin hydrolase Ubp15 (ubp15), mRNA. ACCESSION NM_001021249 VERSION NM_001021249.2 DBLINK BioProject: PRJNA127 BioSample: SAMEA3138176 KEYWORDS RefSeq. SOURCE Schizosaccharomyces pombe (fission yeast) ORGANISM Schizosaccharomyces pombe Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces. REFERENCE 1 (bases 1 to 3891) AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R., Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D., Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T., Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P., Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D., Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S., Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M., Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S., Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S., Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S., Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M., Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G., Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J., Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I., Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D., Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H., Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H., Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S., Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z., Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C., Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L., Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A., Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L., Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V., Ussery,D., Barrell,B.G. and Nurse,P. TITLE The genome sequence of Schizosaccharomyces pombe JOURNAL Nature 415 (6874), 871-880 (2002) PUBMED 11859360 REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to Cerutti L]] REFERENCE 2 (bases 1 to 3891) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (13-JUL-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 3891) AUTHORS Wood,V. CONSRTM The Schizosaccharomyces pombe Genome Sequencing Consortium TITLE Direct Submission JOURNAL Submitted (29-JUN-2007) European Schizosaccharomyces genome sequencing project, Sanger Institute, The Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_003423). On Dec 10, 2012 this sequence version replaced NM_001021249.1. FEATURES Location/Qualifiers source 1..3891 /organism="Schizosaccharomyces pombe" /mol_type="mRNA" /strain="972h-" /db_xref="taxon:4896" /chromosome="II" gene 1..3891 /gene="ubp15" /locus_tag="SPBC713.02c" /gene_synonym="ubp21; ubpD" /db_xref="GeneID:2541131" CDS 233..3622 /gene="ubp15" /locus_tag="SPBC713.02c" /gene_synonym="ubp21; ubpD" /EC_number="3.1.2.15" /codon_start=1 /product="ubiquitin hydrolase Ubp15" /protein_id="NP_595341.1" /db_xref="GeneID:2541131" /db_xref="GOA:Q9UTT1" /db_xref="InterPro:IPR001394" /db_xref="InterPro:IPR002083" /db_xref="InterPro:IPR008974" /db_xref="InterPro:IPR018200" /db_xref="InterPro:IPR024729" /db_xref="InterPro:IPR028889" /db_xref="InterPro:IPR029346" /translation="MVLSNVDAEEVNMDSSMELEESSQEPLRADNYEEIYNSLVHHEP DLEEAAHASYSWVVKNFSTLEDKTYSPLFKAGHTTWRIVLFPKGCNQTEYASVFLEYL PQCKVEAIRKYEAELAAGKTPTIDPEIVNDETYSCCAQFALSLSNVQDPTVMQINTSH HRFRSEVKDWGFTRFVDLRKIAVPTPEFPVPFLENDEICISVTVRVLQDPTGVLWHSF VNYNSKKETGYVGLKNQGATCYMNSLLQSLFFTNIFRKTVYKIPTDNDDSRDSVAYAL QRVFYNLEKQREPVSTTELTRSFGWNSFDSFMQHDIQEFNRVLQDNLEKKMKGTEVEN ALNDIFVGKMKSYVKCIDVNYESSRVEDFWDIQLNVKGMDTLEDSFRDAIQVETLTGD NKYYAEGHGLQDAHKGIIFESLPNVLQLQLKRFDYDMLRDMMVKINDRHEFPLEIDLE PYLSETADKSESHVYVLHGVLVHGGDLHGGHYYALIKPEKDSNWFKFDDDRVTRATIK EVLEDNYGGEPAGRAKGYNGNPFKRFMNAYMLVYFRKSRLDHILSPVTAEDVPFHVRN TLDEEHRVVERKLLEREEQQIYRRVRVLTTDGFKKYHGFDMTDFSASDDDPVLITTKI KRNANIWDLQKHLAGLLNRDTSGIRIWLMTNRQNRTVRVDLPLDKKTILVDQICDMHI RKDMDMRVYVEFLSEHNQLLADFGATDDNDFDTYIFLKIFDYETQQISGLADLHVSKN SPISSLSEWIREHLKWSSDVPITYYEEIKTGMVDVLDPNASFEKSEIQVGDIICFEKK LVHDSSSDTSHPYKSALDLYDFMAHRVVITFEPRYSDDTNNGVFDLVLTTHTNYTDMA RAVANKLNVDPNYLQFTMAHLPSRTPRSVIRNPSKFTLQNAIPSTYSHNQNVVMFYEV LDITLSELERKQLIRVHFLSNGISHETQMEFYVDKEGTVEDILRQVTQKVPLNAEDAS RLRLYEVYNHRILKSHLPTDGIYDLNEFSTAYVEVTPKEEQMQLKTDDAVSIVVQHFF KDLSRLHDIPFYFVLLRGETLKDLKKRLQKRLGYNDTQFSKVKLAVLQAQSFGKPYYL TDDDEVLYGELEPQSHILGLDHPPANGSAQYHGMDQAIRMK" ORIGIN 1 cgtagcggca tgtgggtgag ctggcatcta attataacgg tcgttgccag aactaaccgc 61 catctaatcc tacactacta actttggaga ccgacatatt tacgtttata gagaaaatta 121 atatcgtttt gttttatttc taaaaaggga taaattaatt gacaattatt tgtacgcatt 181 ttcattctat ctttgttttt gttaagaaac tgaacaagat tgtaatgaca gcatggtgct 241 ttcaaatgta gacgctgaag aagtcaatat ggatagcagc atggaattag aagaaagctc 301 tcaggaacca ctacgtgccg ataattatga ggagatctac aattcattag tgcatcatga 361 acccgacttg gaagaggctg cgcatgcttc ctactcgtgg gtggtgaaga actttagtac 421 cttggaagac aaaacctaca gtcctttatt taaagcagga catactacct ggagaattgt 481 tttatttcct aagggatgca atcaaaccga atacgcgtcc gttttcttag aatatctacc 541 acagtgtaaa gtggaagcaa tccgtaagta tgaggcagaa ttagctgcag gtaaaactcc 601 gactattgat cctgagattg tgaacgatga gacttattct tgctgtgctc agtttgcctt 661 atctttatcg aatgttcagg atccaactgt tatgcaaatt aacacatcgc accatcgttt 721 ccgttccgag gttaaagatt ggggatttac tagatttgtt gatcttcgta agattgctgt 781 tccaacccct gagtttcccg ttccttttct cgaaaacgat gaaatttgta tatctgtgac 841 cgttcgcgtt cttcaagacc ctacaggcgt cctttggcat tcattcgtaa actataactc 901 taagaaagaa acgggctacg ttggtttgaa aaaccaaggt gcaacgtgtt atatgaactc 961 gctacttcaa tctcttttct ttactaatat tttccgtaaa acagtctaca aaattcctac 1021 cgataatgat gattcaaggg atagtgtagc ctacgcttta caaagagtgt tttataacct 1081 cgaaaagcag cgtgaacccg ttagcacgac cgagctaact cgttcttttg gttggaattc 1141 ttttgactct tttatgcaac acgatattca agaatttaat cgtgttttgc aggataacct 1201 agaaaagaaa atgaaaggga cagaggttga aaatgcgctc aatgatatat tcgttggcaa 1261 aatgaaaagt tatgtcaagt gtattgacgt caattacgag tcttctcgag ttgaagactt 1321 ttgggatatt caattgaatg tcaagggaat ggatactttg gaagactcat ttcgagatgc 1381 gattcaagtg gaaaccttga cgggtgacaa taagtattat gctgaaggac acggcttaca 1441 agatgcacat aagggtataa tttttgaatc gcttcccaat gttctacagt tgcaacttaa 1501 gcgctttgat tatgatatgc ttcgagatat gatggtgaaa attaacgatc gacatgaatt 1561 cccattagaa attgatttag agccttatct ctctgaaaca gccgataaaa gtgaatccca 1621 tgtttatgtg ctgcacggtg tcctagtcca tggaggtgat ttgcacggcg gccattatta 1681 tgctcttatt aaaccagaaa aagacagtaa ttggttcaaa ttcgatgatg atcgcgtcac 1741 tcgtgctaca ataaaagaag ttttagaaga taactatggt ggagaaccag ctgggcgtgc 1801 taagggatat aacggaaacc cttttaagcg ctttatgaat gcttatatgt tagtttactt 1861 ccgaaaaagt aggcttgacc acatcctgtc accggtaact gcagaagacg ttccatttca 1921 cgttagaaat acactggatg aagagcatcg agtagtcgaa cggaaattac tcgaacgtga 1981 agaacagcaa atttatagga gggttcgggt acttactact gatggtttta aaaagtatca 2041 tggttttgat atgacagatt tctctgcaag cgatgatgat ccagttctta taactacaaa 2101 aataaaaaga aatgcgaata tttgggattt gcaaaagcac cttgctggac tacttaatag 2161 agacacaagt ggtattcgta tttggcttat gacgaatcgc caaaatcgaa ctgttagagt 2221 tgaccttcca cttgataaaa agactatact cgttgatcag atctgtgata tgcatatacg 2281 taaagacatg gatatgagag tttatgtgga attcttaagt gaacacaatc agctacttgc 2341 ggattttggt gccacggatg ataacgattt cgacacctac atttttctga agattttcga 2401 ttatgaaact cagcaaatat ccggtttggc cgacctacat gtttcaaaga atagccccat 2461 ttcttcactt tcagagtgga ttcgtgaaca tttaaagtgg tcttctgatg ttcctatcac 2521 atattatgaa gaaattaaaa ccggcatggt tgatgttttg gatccgaatg ctagttttga 2581 aaaatccgag atccaagtgg gagacattat atgttttgag aagaaattgg tccatgattc 2641 ttcatcggac acctctcacc cttacaaatc agctcttgac ctctatgatt tcatggcaca 2701 tagagtagta attacttttg agcctcgtta ttccgatgat accaacaatg gtgtttttga 2761 tttggtgctt acaacgcata ccaattatac tgatatggct cgagcagtgg ccaataaact 2821 taatgtcgat cctaattatc ttcagtttac tatggcacat ctaccttcgc gcactcctcg 2881 ttcagtaatt cgtaaccctt cgaaatttac cttacaaaat gcgataccat caacctactc 2941 tcataaccaa aatgtggtta tgttctatga agtcttggac attacgctta gtgaactgga 3001 gcgtaagcaa ttaatccggg tgcatttcct gtcgaatggt atttcgcatg aaactcagat 3061 ggagttttat gttgacaagg aaggaactgt ggaagacatt cttcgacagg ttactcaaaa 3121 agtaccttta aatgctgaag atgcttcgag acttcgtctt tatgaagttt acaatcaccg 3181 gattttgaaa agtcatctac ccacggatgg aatatatgat ctaaatgaat tctccactgc 3241 ttatgttgaa gtcacgccca aagaagaaca aatgcaatta aagactgatg atgcagtgtc 3301 aattgtagta caacactttt tcaaagactt atcacggttg catgatatcc cattttattt 3361 tgtcttactt cgtggtgaga ctttgaaaga cctaaaaaaa cggctgcaaa aacgattggg 3421 ctataacgat acccagttct cgaaagtcaa gcttgcagtt ttgcaggccc agtcatttgg 3481 aaagccttat tatcttaccg acgatgatga agtactctat ggagaacttg aaccacagtc 3541 acatatcttg ggactcgatc atccaccagc taatggtagt gctcaatacc atggtatgga 3601 ccaagcaata agaatgaaat aattgtttat acatcacctt tttaaacctc caatttgaat 3661 gttagcggtg ccatttacta gaagccaagc aattttgttt caatcaataa attgatatat 3721 tctggcaaat agtaatgcat tcgcgtaatg acgtctttgt ttcaaaattt gcgaagcacg 3781 cttcgcatta tatgatatct tactatttac ttgttgtttt gcgtatgatt aaataaaatc 3841 gataatcgcc cgctctttta tactcaaatt tttccaaaat gtattctttt a //