Dbfetch
LOCUS NM_001020083 1414 bp mRNA linear PLN 14-JUL-2022 DEFINITION Schizosaccharomyces pombe putative deoxyhypusine hydroxylase (mmd1), mRNA. ACCESSION NM_001020083 VERSION NM_001020083.2 DBLINK BioProject: PRJNA127 BioSample: SAMEA3138176 KEYWORDS RefSeq. SOURCE Schizosaccharomyces pombe (fission yeast) ORGANISM Schizosaccharomyces pombe Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces. REFERENCE 1 (bases 1 to 1414) AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R., Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D., Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T., Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P., Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D., Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S., Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M., Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S., Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S., Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S., Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M., Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G., Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J., Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I., Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D., Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H., Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H., Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S., Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z., Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C., Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L., Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A., Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L., Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V., Ussery,D., Barrell,B.G. and Nurse,P. TITLE The genome sequence of Schizosaccharomyces pombe JOURNAL Nature 415 (6874), 871-880 (2002) PUBMED 11859360 REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to Cerutti L]] REFERENCE 2 (bases 1 to 1414) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (13-JUL-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 1414) AUTHORS Wood,V. CONSRTM The Schizosaccharomyces pombe Genome Sequencing Consortium TITLE Direct Submission JOURNAL Submitted (29-JUN-2007) European Schizosaccharomyces genome sequencing project, Sanger Institute, The Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_003424). On Dec 10, 2012 this sequence version replaced NM_001020083.1. FEATURES Location/Qualifiers source 1..1414 /organism="Schizosaccharomyces pombe" /mol_type="mRNA" /strain="972h-" /db_xref="taxon:4896" /chromosome="I" gene 1..1414 /gene="mmd1" /locus_tag="SPAC30C2.02" /db_xref="GeneID:2541465" CDS 263..1219 /gene="mmd1" /locus_tag="SPAC30C2.02" /codon_start=1 /product="putative deoxyhypusine hydroxylase" /protein_id="NP_594654.1" /db_xref="EnsemblGenomes-Gn:SPAC30C2.02" /db_xref="EnsemblGenomes-Tr:SPAC30C2.02.1" /db_xref="GeneID:2541465" /db_xref="GOA:Q9P6K9" /db_xref="InterPro:IPR000225" /db_xref="InterPro:IPR004155" /db_xref="InterPro:IPR011989" /db_xref="InterPro:IPR016024" /db_xref="InterPro:IPR027517" /db_xref="PomBase:SPAC30C2.02" /db_xref="PomBase:SPAC30C2.02.1" /translation="MSSEPVPQAVIDELERVLVNLDKSNPLSFRYRALFSLNALAKKG DKRAVDAIYKAFIDDSELLKHEMAYVMGQSGQQYAVQPLINIVNDLDQQVMVRHEAAE ALGALGFTESLPVLEKYYKEDPLAPIRETCELAIARIQWKNGLDKNNEKITPSMYDSV VDPAPPMPDHEQDVKSEVAKLRSEIVDQNLPLFYRYRVMFRLRNIGNEEAVLALTDGF KDPSPLFRHEIAFVFGQMIAPASVPALIKVLENTEEVPMVRHEAAEALGGIANDECLP VLKKFSKDDVRVVAESCIVALDMIEYEKSGDMEYAYIPKVSA" ORIGIN 1 tccaacttat attgacagaa gttagtgtga aacaatagga aagaagtgag tcctctaaat 61 aaatagatag agggaaaaaa agaaaattga gcgctttaag aaatataccg cttttgatac 121 atcgctactt ctaggaagaa agtaatacgc attactatta ttcccttact taactgattt 181 aaaacaaaac acagcgctaa ttaatatcat ttctcttgtc gaatttgata ttttttcaag 241 agaaatttct tgtcagttaa acatgtcttc agaacccgtt ccccaagcag ttattgatga 301 attagagcgc gtgcttgtca atttagataa atcaaatcct ctttcctttc gctatcgtgc 361 cctttttagt ctgaatgcgt tggcaaagaa gggggacaag cgtgccgttg atgcgattta 421 caaagccttt attgatgatt ccgaattact gaaacatgaa atggcttatg ttatggggca 481 atcaggacaa caatatgctg ttcagccttt gattaatatt gtgaacgatc ttgaccaaca 541 agtcatggta cgtcacgaag cagctgaagc cttgggagcc ttgggattta ctgaaagcct 601 tcctgttttg gaaaaatact ataaggaaga tcctttagct cctattcgcg aaacttgtga 661 actggctatt gcccgcattc aatggaagaa cggcctcgat aagaataatg agaagattac 721 tcccagtatg tatgattcag ttgtcgatcc cgctcctccc atgcccgatc acgaacaaga 781 tgtgaaatct gaggtagcta aacttcgttc tgaaattgtc gaccaaaatt tgcccttatt 841 ttaccgttat cgtgtgatgt ttcgtttgcg taacattggt aacgaagaag cggtgttggc 901 tttaacagac ggttttaagg atccttcccc tttgttccgt catgaaattg ctttcgtttt 961 cggtcaaatg attgctcctg cttctgttcc tgctctgatt aaagtgttgg aaaatactga 1021 agaagttccc atggttcgcc atgaagcagc agaagcatta ggtggtattg ctaacgatga 1081 atgccttcct gttttaaaga agttttcgaa agatgatgta cgtgttgttg cagaatcctg 1141 catcgttgct cttgatatga tcgaatatga gaaatctggt gatatggaat atgcctatat 1201 tcccaaagtt agtgcataat gtggattcgt atggttgggt tcgctacttt agcttagcca 1261 gattctttgg gttttcattg tagattagga ttttaaattc tgggtatttt tggataacag 1321 ttattgaaaa tgtacattac tgaaaatttc tgaaattcat taataaaaat tggttagtag 1381 tttattggaa tttattggtt actttattgc ataa //