Dbfetch
LOCUS NM_001020080 4250 bp mRNA linear PLN 14-JUL-2022
DEFINITION Schizosaccharomyces pombe putative tRNA nucleotidyltransferase
(SPAC1093.04c), partial mRNA.
ACCESSION NM_001020080
VERSION NM_001020080.3
DBLINK BioProject: PRJNA127
BioSample: SAMEA3138176
KEYWORDS RefSeq.
SOURCE Schizosaccharomyces pombe (fission yeast)
ORGANISM Schizosaccharomyces pombe
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina;
Schizosaccharomycetes; Schizosaccharomycetales;
Schizosaccharomycetaceae; Schizosaccharomyces.
REFERENCE 1 (bases 1 to 4250)
AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R.,
Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D.,
Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T.,
Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P.,
Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D.,
Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S.,
Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M.,
Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S.,
Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S.,
Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S.,
Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M.,
Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G.,
Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J.,
Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I.,
Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C.,
Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D.,
Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H.,
Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H.,
Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S.,
Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z.,
Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C.,
Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L.,
Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A.,
Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L.,
Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V.,
Ussery,D., Barrell,B.G. and Nurse,P.
TITLE The genome sequence of Schizosaccharomyces pombe
JOURNAL Nature 415 (6874), 871-880 (2002)
PUBMED 11859360
REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to
Cerutti L]]
REFERENCE 2 (bases 1 to 4250)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (13-JUL-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 4250)
AUTHORS Wood,V.
CONSRTM The Schizosaccharomyces pombe Genome Sequencing Consortium
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2007) European Schizosaccharomyces genome
sequencing project, Sanger Institute, The Wellcome Trust Genome
Campus, Hinxton, Cambridge CB10 1SA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. This record is derived from an annotated genomic
sequence (NC_003424).
On Dec 10, 2012 this sequence version replaced NM_001020080.2.
COMPLETENESS: incomplete on the 5' end.
FEATURES Location/Qualifiers
source 1..4250
/organism="Schizosaccharomyces pombe"
/mol_type="mRNA"
/strain="972h-"
/db_xref="taxon:4896"
/chromosome="I"
gene <1..4250
/locus_tag="SPAC1093.04c"
/db_xref="GeneID:2542977"
CDS 1..1503
/locus_tag="SPAC1093.04c"
/EC_number="2.7.7.72"
/codon_start=1
/product="putative tRNA nucleotidyltransferase"
/protein_id="NP_594651.2"
/db_xref="EnsemblGenomes-Gn:SPAC1093.04c"
/db_xref="EnsemblGenomes-Tr:SPAC1093.04c.1"
/db_xref="GeneID:2542977"
/db_xref="GOA:Q9UTQ0"
/db_xref="InterPro:IPR002646"
/db_xref="PomBase:SPAC1093.04c"
/db_xref="PomBase:SPAC1093.04c.1"
/translation="MASSSSILELNETEKELSDIFLNVSKKIGQMDRKEPEVRFAGGW
VRDKLLRIESHDIDVAIDCMSGFEFAQHLQSYLAQQHPDWETKVIKIDANPLKSKHLE
TATARIMGMDIDIVNLRHHDYTNSNSSNKLVFGTPLEDALRRDATINALFYNLKSKTV
EDFTGKGLVDLSNKIIRTPLVADETFGDDPLRAVRCIRFATKYDFNIHEETIKGLKNP
ELHERLRSSISRERIGVEVDKMLKHCNTNRALKIIHSLGMFACIFGPLEIHTKKLQSK
NIESLSLIPYAIDLFGYLQKKDVSIKNLSSSSKYIFWLAIATLPWYNWSILEKSKIKI
LPPILIRDSLKYSKPIMSQVENFFVHYPLIMSKINVLEKEGKLTRLGCGRLVRELGPH
WRDIIDWAFFMNTLISNSDIQRLNKDEEVTWFHVLVKHIEEYGMEEAYNIQPIINGNE
ITRILGIRPGPHLRKMLDDSIEWRIQNPESTKEDYIAIMLEKGTSAVVDS"
ORIGIN
1 atggctagca gctcttctat tttggagctg aacgaaaccg aaaaggagtt aagtgatata
61 ttcctcaatg tctcaaagaa aattggtcaa atggatcgga aggagcctga agttagattt
121 gccggtggtt gggttcgtga taaattatta agaatcgaaa gtcacgatat agatgtagct
181 attgattgta tgtccggttt cgaatttgca cagcatctcc aaagttattt ggctcaacaa
241 caccctgact gggagacaaa agttatcaaa attgatgcga atcctctaaa gtcaaagcac
301 cttgaaacag ccactgcaag aattatggga atggatattg acattgttaa tttaagacat
361 catgactaca ctaattcaaa ttcgtctaac aaactcgttt tcggaacacc tttagaagat
421 gctttgagac gggacgcaac aatcaatgct ttattttaca acttgaagag taagactgtg
481 gaagacttta cgggaaaagg attggttgac ttaagtaata aaattataag gacaccactt
541 gtagccgatg agacgtttgg tgacgaccct ttacgagcag ttcgatgtat tcgttttgct
601 acgaaatatg atttcaacat tcacgaagag actattaagg ggttgaaaaa tcccgaactt
661 catgagcgat tacggtcatc tataagcaga gagcgcattg gtgttgaagt tgataaaatg
721 ttaaaacatt gtaacaccaa ccgtgcatta aaaattatcc atagccttgg catgtttgca
781 tgcatctttg ggccgctaga aatccatact aaaaaattac aatcgaaaaa cattgaatca
841 cttagcctaa ttccttatgc aattgatttg ttcggatatt tacaaaaaaa ggatgtcagt
901 attaaaaatc tatcttcatc ttctaaatat attttctggt tagcaattgc tacgcttcca
961 tggtataact ggagtatcct ggagaaatcc aaaattaaaa tacttccacc tattttgata
1021 cgtgacagct taaaatatag caaaccaata atgtctcaag ttgaaaattt ctttgttcat
1081 tatcctttaa ttatgtcaaa aataaatgtt ctcgaaaaag aaggcaagct tactaggtta
1141 ggttgtggaa gactggtaag agaacttggt cctcactgga gagatattat tgattgggct
1201 ttttttatga acacgcttat tagtaattcc gatattcagc gattgaacaa ggatgaggaa
1261 gttacttggt ttcacgttct ggttaaacat attgaggaat acggcatgga agaagcatac
1321 aatattcagc caatcataaa tggaaatgaa ataactagga ttttgggaat acgtccggga
1381 ccacatttgc gtaaaatgtt agatgattct attgaatgga gaattcaaaa tcccgaatca
1441 actaaagaag actatatagc aatcatgcta gaaaaaggta cttccgctgt agttgactca
1501 taaattcgat tagttaaagc ataaaggaaa aaaaattaaa ctaaagggat ctaaagaatt
1561 atattttcat aacacgaaaa tttaataaat acgacgtttc gagttaaaat aaaagccaca
1621 aaaaaaaatc ggttcaagtt gacttatagt cagtaatcca agcgctatag aacgctacct
1681 tttccgaccg atcagacttt aaagttggat tctctgaaat agccgagttg aagtagtcat
1741 tataagtatt aagttctttt tccttgattt ctttaatttt atccggagaa taatcagcat
1801 aattattata cattgcccga tcgtgtttgc ttaataaagt ataattatcc gccaaccccg
1861 atatattgtt atactgaaaa tgtattttat aaacattaat atcagtattc ggaattttga
1921 aatcaggctg tttttgatct cttggttgta ctttattcga caccggaatt tgatgcagtc
1981 tttttcgtat aaacttatgg actggtcttt cctcattatt aaatagccat ttatacaagg
2041 aaacccgtct aaacttatca tcatcttcat cctcatcttc attttcttct tctgcggaag
2101 tcttaaacat atcgcgtggt tgatttctgc ggggaataaa cggatttaaa gacggggctt
2161 caatgccgaa accattgtat gataaaggta aaaatgactt tcgcagaagc gggatgagac
2221 ttaacggagc aaaatttaag gtcgaaatca gattgggcaa cagaacttca gaaaacgaag
2281 aaatagaatt aggagtataa acattatcaa aatagtttgc aggaaactta atccccttcc
2341 tttgaatgct atcgcagtaa gcatttttgc atcgtaattc ttgattcaca taaactggtg
2401 tccaccagta ccggtaatct cggcgaacca attgcccatt tttgaacttt tcggtgagcg
2461 cttgtaaccg tttttcacca aaaaccacaa ttttaccatg aactgtaaag tttccaagga
2521 acaaactgat ggcctcttga cgttgaaaat cgacaaagga attactataa aatcttttga
2581 cactttcgat taagtctctt gaagtgctcg accactgatt gttctttcga taagtatcaa
2641 gcgtgttaac taataaggag ccaccgtatt gaagagcaat tgcatcgcca tggccatgat
2701 acatctcagc aagcaatctg acagcatcgg actcgtagtc aagctgtgga gaatctaaaa
2761 cacccaaagc tcttaattga gctgctaaaa cacattttcc aatcacaaat tgcgcagcat
2821 ttgtacgatc caagcagtcg acacagtttg tacgaacaac tccagtttga aaagtaccag
2881 ggaaaaatct atcagcagtg cagaagaagc ctgtcttttt tacaatatca ctagccattt
2941 gttctagagt tttagtcaca ggaacttttc tgtcgttatg ttaatacgaa tataaccgtt
3001 aaaaacatac ttttttgaag cagcggacat atcccacgca atatattgaa tcttctggga
3061 atctttcaaa aattgattaa gatattgtat agcagattca aattcatcca ataataagga
3121 ctctcttttg actttctctg atgatttaac aagatttaaa acaatacatg gaataccgta
3181 atgaccgaat aaacgatcaa aatgtaaggc ggttgaagca taaaaaggat cgtgaaaatc
3241 aatacctatt ggtggctttg gcgttatgtt gctaaattct tgagaccagc gaagcggaat
3301 gcttcctcgg tgttgtacgt agctagtata acaaggaatc ccaggagtgg ttgaagatat
3361 tggaaaggaa gatgctgagc cgtcgaacac aatttgctct gtctcaactt cattagcgac
3421 atatccatca tctcgaattc ctcttcttaa gaagcgagca ccggcaaaat gccgcgacct
3481 tcgtgcaatt aaagtgacaa taataggttt gccataaaca gaaagttctt ataagttagt
3541 atatataaaa agagaaatag gagtaaatga aaaaatttca acgtactagc ttgatcaaca
3601 aaaccatgga taagagggat acaccaagga gaatcaattc ctacagagtc caaaattggg
3661 cgcagcatat tccaattcca aacaaacata tctctaacct gatgctgagg aattggatga
3721 gtaaatccat attgtattgt ttgtgataaa tcataactgt agctaaaata aaaggttcta
3781 gcaagatcaa ctttttcaat gcttgacata cacctataag aattagaatc ttaaactcat
3841 attttttgaa gaccaactgg aatactggaa tttcgacact tactttcgtt caacactggt
3901 attatgtctt cgacttggat tcagttcaat gaattgagtc ttatcaacat ggtagacatt
3961 atgtcctccg attacagcaa caacttttct ttctgtacac aaatacaaat agtacccagc
4021 tgtaaatcga aaaaggccca agattgcata tgccttggta acaagtatta gttttccatc
4081 ggcgctctca ttttctaatt tttctaaata caattgaagc ttctggcgaa aaagtatttt
4141 tgcggcctct tcaatactta tagaaagctc atcttcagat tgagtaatct ttaaaatacg
4201 aaaaattgtt gcagtagcgt tttcgctcac aatatagtag cactcaaaag
//