Dbfetch

LOCUS       NM_001020080            4250 bp    mRNA    linear   PLN 14-JUL-2022
DEFINITION  Schizosaccharomyces pombe putative tRNA nucleotidyltransferase
            (SPAC1093.04c), partial mRNA.
ACCESSION   NM_001020080
VERSION     NM_001020080.3
DBLINK      BioProject: PRJNA127
            BioSample: SAMEA3138176
KEYWORDS    RefSeq.
SOURCE      Schizosaccharomyces pombe (fission yeast)
  ORGANISM  Schizosaccharomyces pombe
            Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina;
            Schizosaccharomycetes; Schizosaccharomycetales;
            Schizosaccharomycetaceae; Schizosaccharomyces.
REFERENCE   1  (bases 1 to 4250)
  AUTHORS   Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R.,
            Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D.,
            Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T.,
            Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P.,
            Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D.,
            Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S.,
            Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M.,
            Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S.,
            Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S.,
            Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S.,
            Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M.,
            Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G.,
            Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J.,
            Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I.,
            Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C.,
            Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D.,
            Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H.,
            Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H.,
            Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S.,
            Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z.,
            Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C.,
            Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L.,
            Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A.,
            Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L.,
            Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V.,
            Ussery,D., Barrell,B.G. and Nurse,P.
  TITLE     The genome sequence of Schizosaccharomyces pombe
  JOURNAL   Nature 415 (6874), 871-880 (2002)
   PUBMED   11859360
  REMARK    Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to
            Cerutti L]]
REFERENCE   2  (bases 1 to 4250)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-JUL-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 4250)
  AUTHORS   Wood,V.
  CONSRTM   The Schizosaccharomyces pombe Genome Sequencing Consortium
  TITLE     Direct Submission
  JOURNAL   Submitted (29-JUN-2007) European Schizosaccharomyces genome
            sequencing project, Sanger Institute, The Wellcome Trust Genome
            Campus, Hinxton, Cambridge CB10 1SA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NC_003424).
            
            On Dec 10, 2012 this sequence version replaced NM_001020080.2.
            COMPLETENESS: incomplete on the 5' end.
FEATURES             Location/Qualifiers
     source          1..4250
                     /organism="Schizosaccharomyces pombe"
                     /mol_type="mRNA"
                     /strain="972h-"
                     /db_xref="taxon:4896"
                     /chromosome="I"
     gene            <1..4250
                     /locus_tag="SPAC1093.04c"
                     /db_xref="GeneID:2542977"
     CDS             1..1503
                     /locus_tag="SPAC1093.04c"
                     /EC_number="2.7.7.72"
                     /codon_start=1
                     /product="putative tRNA nucleotidyltransferase"
                     /protein_id="NP_594651.2"
                     /db_xref="EnsemblGenomes-Gn:SPAC1093.04c"
                     /db_xref="EnsemblGenomes-Tr:SPAC1093.04c.1"
                     /db_xref="GeneID:2542977"
                     /db_xref="GOA:Q9UTQ0"
                     /db_xref="InterPro:IPR002646"
                     /db_xref="PomBase:SPAC1093.04c"
                     /db_xref="PomBase:SPAC1093.04c.1"
                     /translation="MASSSSILELNETEKELSDIFLNVSKKIGQMDRKEPEVRFAGGW
                     VRDKLLRIESHDIDVAIDCMSGFEFAQHLQSYLAQQHPDWETKVIKIDANPLKSKHLE
                     TATARIMGMDIDIVNLRHHDYTNSNSSNKLVFGTPLEDALRRDATINALFYNLKSKTV
                     EDFTGKGLVDLSNKIIRTPLVADETFGDDPLRAVRCIRFATKYDFNIHEETIKGLKNP
                     ELHERLRSSISRERIGVEVDKMLKHCNTNRALKIIHSLGMFACIFGPLEIHTKKLQSK
                     NIESLSLIPYAIDLFGYLQKKDVSIKNLSSSSKYIFWLAIATLPWYNWSILEKSKIKI
                     LPPILIRDSLKYSKPIMSQVENFFVHYPLIMSKINVLEKEGKLTRLGCGRLVRELGPH
                     WRDIIDWAFFMNTLISNSDIQRLNKDEEVTWFHVLVKHIEEYGMEEAYNIQPIINGNE
                     ITRILGIRPGPHLRKMLDDSIEWRIQNPESTKEDYIAIMLEKGTSAVVDS"
ORIGIN      
        1 atggctagca gctcttctat tttggagctg aacgaaaccg aaaaggagtt aagtgatata
       61 ttcctcaatg tctcaaagaa aattggtcaa atggatcgga aggagcctga agttagattt
      121 gccggtggtt gggttcgtga taaattatta agaatcgaaa gtcacgatat agatgtagct
      181 attgattgta tgtccggttt cgaatttgca cagcatctcc aaagttattt ggctcaacaa
      241 caccctgact gggagacaaa agttatcaaa attgatgcga atcctctaaa gtcaaagcac
      301 cttgaaacag ccactgcaag aattatggga atggatattg acattgttaa tttaagacat
      361 catgactaca ctaattcaaa ttcgtctaac aaactcgttt tcggaacacc tttagaagat
      421 gctttgagac gggacgcaac aatcaatgct ttattttaca acttgaagag taagactgtg
      481 gaagacttta cgggaaaagg attggttgac ttaagtaata aaattataag gacaccactt
      541 gtagccgatg agacgtttgg tgacgaccct ttacgagcag ttcgatgtat tcgttttgct
      601 acgaaatatg atttcaacat tcacgaagag actattaagg ggttgaaaaa tcccgaactt
      661 catgagcgat tacggtcatc tataagcaga gagcgcattg gtgttgaagt tgataaaatg
      721 ttaaaacatt gtaacaccaa ccgtgcatta aaaattatcc atagccttgg catgtttgca
      781 tgcatctttg ggccgctaga aatccatact aaaaaattac aatcgaaaaa cattgaatca
      841 cttagcctaa ttccttatgc aattgatttg ttcggatatt tacaaaaaaa ggatgtcagt
      901 attaaaaatc tatcttcatc ttctaaatat attttctggt tagcaattgc tacgcttcca
      961 tggtataact ggagtatcct ggagaaatcc aaaattaaaa tacttccacc tattttgata
     1021 cgtgacagct taaaatatag caaaccaata atgtctcaag ttgaaaattt ctttgttcat
     1081 tatcctttaa ttatgtcaaa aataaatgtt ctcgaaaaag aaggcaagct tactaggtta
     1141 ggttgtggaa gactggtaag agaacttggt cctcactgga gagatattat tgattgggct
     1201 ttttttatga acacgcttat tagtaattcc gatattcagc gattgaacaa ggatgaggaa
     1261 gttacttggt ttcacgttct ggttaaacat attgaggaat acggcatgga agaagcatac
     1321 aatattcagc caatcataaa tggaaatgaa ataactagga ttttgggaat acgtccggga
     1381 ccacatttgc gtaaaatgtt agatgattct attgaatgga gaattcaaaa tcccgaatca
     1441 actaaagaag actatatagc aatcatgcta gaaaaaggta cttccgctgt agttgactca
     1501 taaattcgat tagttaaagc ataaaggaaa aaaaattaaa ctaaagggat ctaaagaatt
     1561 atattttcat aacacgaaaa tttaataaat acgacgtttc gagttaaaat aaaagccaca
     1621 aaaaaaaatc ggttcaagtt gacttatagt cagtaatcca agcgctatag aacgctacct
     1681 tttccgaccg atcagacttt aaagttggat tctctgaaat agccgagttg aagtagtcat
     1741 tataagtatt aagttctttt tccttgattt ctttaatttt atccggagaa taatcagcat
     1801 aattattata cattgcccga tcgtgtttgc ttaataaagt ataattatcc gccaaccccg
     1861 atatattgtt atactgaaaa tgtattttat aaacattaat atcagtattc ggaattttga
     1921 aatcaggctg tttttgatct cttggttgta ctttattcga caccggaatt tgatgcagtc
     1981 tttttcgtat aaacttatgg actggtcttt cctcattatt aaatagccat ttatacaagg
     2041 aaacccgtct aaacttatca tcatcttcat cctcatcttc attttcttct tctgcggaag
     2101 tcttaaacat atcgcgtggt tgatttctgc ggggaataaa cggatttaaa gacggggctt
     2161 caatgccgaa accattgtat gataaaggta aaaatgactt tcgcagaagc gggatgagac
     2221 ttaacggagc aaaatttaag gtcgaaatca gattgggcaa cagaacttca gaaaacgaag
     2281 aaatagaatt aggagtataa acattatcaa aatagtttgc aggaaactta atccccttcc
     2341 tttgaatgct atcgcagtaa gcatttttgc atcgtaattc ttgattcaca taaactggtg
     2401 tccaccagta ccggtaatct cggcgaacca attgcccatt tttgaacttt tcggtgagcg
     2461 cttgtaaccg tttttcacca aaaaccacaa ttttaccatg aactgtaaag tttccaagga
     2521 acaaactgat ggcctcttga cgttgaaaat cgacaaagga attactataa aatcttttga
     2581 cactttcgat taagtctctt gaagtgctcg accactgatt gttctttcga taagtatcaa
     2641 gcgtgttaac taataaggag ccaccgtatt gaagagcaat tgcatcgcca tggccatgat
     2701 acatctcagc aagcaatctg acagcatcgg actcgtagtc aagctgtgga gaatctaaaa
     2761 cacccaaagc tcttaattga gctgctaaaa cacattttcc aatcacaaat tgcgcagcat
     2821 ttgtacgatc caagcagtcg acacagtttg tacgaacaac tccagtttga aaagtaccag
     2881 ggaaaaatct atcagcagtg cagaagaagc ctgtcttttt tacaatatca ctagccattt
     2941 gttctagagt tttagtcaca ggaacttttc tgtcgttatg ttaatacgaa tataaccgtt
     3001 aaaaacatac ttttttgaag cagcggacat atcccacgca atatattgaa tcttctggga
     3061 atctttcaaa aattgattaa gatattgtat agcagattca aattcatcca ataataagga
     3121 ctctcttttg actttctctg atgatttaac aagatttaaa acaatacatg gaataccgta
     3181 atgaccgaat aaacgatcaa aatgtaaggc ggttgaagca taaaaaggat cgtgaaaatc
     3241 aatacctatt ggtggctttg gcgttatgtt gctaaattct tgagaccagc gaagcggaat
     3301 gcttcctcgg tgttgtacgt agctagtata acaaggaatc ccaggagtgg ttgaagatat
     3361 tggaaaggaa gatgctgagc cgtcgaacac aatttgctct gtctcaactt cattagcgac
     3421 atatccatca tctcgaattc ctcttcttaa gaagcgagca ccggcaaaat gccgcgacct
     3481 tcgtgcaatt aaagtgacaa taataggttt gccataaaca gaaagttctt ataagttagt
     3541 atatataaaa agagaaatag gagtaaatga aaaaatttca acgtactagc ttgatcaaca
     3601 aaaccatgga taagagggat acaccaagga gaatcaattc ctacagagtc caaaattggg
     3661 cgcagcatat tccaattcca aacaaacata tctctaacct gatgctgagg aattggatga
     3721 gtaaatccat attgtattgt ttgtgataaa tcataactgt agctaaaata aaaggttcta
     3781 gcaagatcaa ctttttcaat gcttgacata cacctataag aattagaatc ttaaactcat
     3841 attttttgaa gaccaactgg aatactggaa tttcgacact tactttcgtt caacactggt
     3901 attatgtctt cgacttggat tcagttcaat gaattgagtc ttatcaacat ggtagacatt
     3961 atgtcctccg attacagcaa caacttttct ttctgtacac aaatacaaat agtacccagc
     4021 tgtaaatcga aaaaggccca agattgcata tgccttggta acaagtatta gttttccatc
     4081 ggcgctctca ttttctaatt tttctaaata caattgaagc ttctggcgaa aaagtatttt
     4141 tgcggcctct tcaatactta tagaaagctc atcttcagat tgagtaatct ttaaaatacg
     4201 aaaaattgtt gcagtagcgt tttcgctcac aatatagtag cactcaaaag
//