Dbfetch
LOCUS NM_001019824 1539 bp mRNA linear PLN 14-JUL-2022 DEFINITION Schizosaccharomyces pombe tRNA (guanine) methyltransferase Trm5 (trm5), partial mRNA. ACCESSION NM_001019824 VERSION NM_001019824.3 DBLINK BioProject: PRJNA127 BioSample: SAMEA3138176 KEYWORDS RefSeq. SOURCE Schizosaccharomyces pombe (fission yeast) ORGANISM Schizosaccharomyces pombe Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces. REFERENCE 1 (bases 1 to 1539) AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R., Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D., Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T., Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P., Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D., Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S., Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M., Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S., Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S., Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S., Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M., Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G., Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J., Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I., Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D., Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H., Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H., Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S., Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z., Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C., Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L., Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A., Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L., Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V., Ussery,D., Barrell,B.G. and Nurse,P. TITLE The genome sequence of Schizosaccharomyces pombe JOURNAL Nature 415 (6874), 871-880 (2002) PUBMED 11859360 REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to Cerutti L]] REFERENCE 2 (bases 1 to 1539) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (13-JUL-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 1539) AUTHORS Wood,V. CONSRTM The Schizosaccharomyces pombe Genome Sequencing Consortium TITLE Direct Submission JOURNAL Submitted (29-JUN-2007) European Schizosaccharomyces genome sequencing project, Sanger Institute, The Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_003424). On Dec 10, 2012 this sequence version replaced NM_001019824.2. COMPLETENESS: incomplete on the 5' end. FEATURES Location/Qualifiers source 1..1539 /organism="Schizosaccharomyces pombe" /mol_type="mRNA" /strain="972h-" /db_xref="taxon:4896" /chromosome="I" gene <1..1539 /gene="trm5" /locus_tag="SPAPB18E9.01" /db_xref="GeneID:3361429" CDS 1..1353 /gene="trm5" /locus_tag="SPAPB18E9.01" /codon_start=1 /product="tRNA (guanine) methyltransferase Trm5" /protein_id="NP_001018269.2" /db_xref="EnsemblGenomes-Gn:SPAPB18E9.01" /db_xref="EnsemblGenomes-Tr:SPAPB18E9.01.1" /db_xref="GeneID:3361429" /db_xref="GOA:Q8TFG7" /db_xref="InterPro:IPR003402" /db_xref="InterPro:IPR025792" /db_xref="InterPro:IPR029063" /db_xref="PomBase:SPAPB18E9.01" /db_xref="PomBase:SPAPB18E9.01.1" /translation="MHLQIRTVHNMAELLHPNKVEMKPFLKNLDKNLFKKTYNLVAAK VSPKKVGLLNKVCKKDLLDWPRVKHVYQQNNEKLVLLNRDASLDGTRGLSDATVSFIK ENNIELVPFQLTLDYDYWRADDILDAILPPGEKEDHPSGFTAVGHIAHMNLREEWLPY KYIIGKVILDKNPSIETVVNKTDTIDTKFRTFQMEVLAGKDDFIVTQSESNCKFRFDF SKVYWNSRLSTEHDRLIQQFQPGDAVCDVMAGVGPFACPAGKKNVIVFANDLNPYSYE SLVENIFLNKVANFVKAFNQDGREFIRSSVQKLLGFSKDEKAITVFPPRKRARKLEEN KDPVRQDIPIPPVFSHYVMNLPGSAIEFLDAFKGCYYGLEYLFKDRSLPKVHVHCFCR FPDPEEDLINRIYASLGYRFSPEEVDFYYVRKVAPNKDMYCCTFTLPGSIIFAKPVSG " ORIGIN 1 atgcatttac agattagaac tgttcacaat atggcagaat tattacatcc aaataaagtt 61 gaaatgaagc cattccttaa gaatttagat aaaaatttgt ttaaaaaaac atataatctt 121 gttgcagcca aggtttctcc taaaaaagtg ggacttttaa acaaagtctg caaaaaagac 181 cttttggatt ggcctcgtgt taaacacgta tatcaacaaa ataacgaaaa acttgtactt 241 ttgaatcgtg atgctagctt ggatggtact cggggtttat cggatgctac cgtatctttt 301 attaaagaaa ataatataga gttagttcct tttcagttga ctttggacta tgactattgg 361 agagcagatg atatactgga tgctatttta cctcccggcg agaaagagga tcatccttct 421 ggcttcaccg ctgttggaca tatagcacat atgaacttac gtgaggaatg gcttccttat 481 aaatatatca ttggaaaagt tattttagac aagaatcctt ctattgaaac cgttgttaac 541 aaaactgaca ctatcgatac caaatttcgt acctttcaaa tggaagtatt ggccggaaag 601 gatgatttta tagttactca gtctgaatca aactgcaaat ttcgatttga cttctccaaa 661 gtatattgga attcacgcct tagcactgaa catgaccgtt tgatacagca atttcaacct 721 ggagatgctg tttgcgacgt aatggcagga gttggcccat ttgcctgtcc ggctggaaaa 781 aaaaatgtaa tcgtgtttgc aaacgatttg aatccttaca gctatgaaag tttagttgag 841 aacatttttc taaacaaggt tgcgaatttt gtaaaagcat tcaatcaaga tggtagagaa 901 tttattcgtt cctctgttca gaaactatta ggattctcta aagatgaaaa agccattaca 961 gtctttcctc cgagaaagcg agcacgtaaa ttggaagaaa ataaagatcc tgtgagacag 1021 gatattccca tccctcctgt attttcacac tatgtaatga atttacccgg atcagcgatt 1081 gaatttttag atgctttcaa aggttgttat tatggattgg agtacttgtt taaagaccgc 1141 tctcttccaa aagttcatgt tcactgcttt tgtagatttc ccgatcctga ggaagatctt 1201 ataaatcgga tatacgcttc gttggggtat cgtttttctc ctgaagaagt tgacttttat 1261 tatgtccgaa aagttgctcc caacaaggat atgtactgtt gtactttcac gttacctggt 1321 tctataatat ttgctaaacc ggtttcaggt tagtctttat aggattgaaa tgtcgttcag 1381 gagaagatga gctattttgg gcttattatt ttttcattac tttaactgtt acatatcctg 1441 tagaaaaaac ctcagtaaaa ataaaagtta taaatccaaa aaagtcttgt aagttgacaa 1501 aagtaaactt ttttcaaaaa aattagtgtt attaatatt //